08/01/2006

Accepted Full length Articles (Refereed Journals):
Hassan G., R. Reneau, C. Hagedorn and M. Saluta. 2005. Modeling water flow behavior where highly treated effluent is applied to soil at varying rates and dosing frequencies. Soil Sci. 170 (9): 692-706.

McDonald, J. L., P. G. Hartel, L. C. Gentit, K. W. Gates, K. Rodgers, J. A. Fisher, K. A. Smith, K. A. Payne, and C. N. Belcher. 2006. Identifying sources of fecal contamination inexpensively with targeted sampling and bacterial source tracking. J. Environ. Qual. 35:889-897.

McMullen, J., O.O. Fasina, C.W. Wood and Y. Feng. 2005. Storage and handling characteristics of pellets from poultry litter. Appl. Eng. Agric. 21:645-651.

Jenkins, M.B., Endale, D.M., Schomberg, H.H., and Sharpe, R.R. 2006. Fecal bacteria and sex hormones in soil and runoff from cropped watersheds amended with poultry litter. Science of the Total Environment 358:164-177.

Soupir M., S. Mostaghimi, G. Yagow, C. Hagedorn and D. Vaughan. 2005. Release and transport of bacteria from livestock manure applied to pasturelands. Water, Air, and Soil Pollution. 169: 125-136. URL: http://dx.doi.org/10.1007/s11270-005-1808-2.

Accepted Full Length Articles (Book Chapters):
Feng, Y. 200X. Soil Microbiology. In: Encyclopedia of Soil Science, W. Chesworth (ed). Springer Publishing Company, New York, NY. (in press)

Keeling, W. G., C. Hagedorn, and B. A. Wiggins, and K. Porter. 2005. Bacterial Source Tracking: Concept and Application to TMDL. In "Total Maximum Daily Load: Approaches and Challenges," (T. Younos, Ed.). PennWell Books, Tulsa, OK.
URL: http://store.yahoo.com/pennwell/totmaxdaillo2.html.

In Print Abstracts:
Colley, Z., Fasina, O.O., Brasnby, D., Wood, C.W., Feng, Y. 2005. Compaction behavior of poultry litter and switchgrass. Paper No. 05-6053. ASAE International Meeting, Tampa, FL. July 17thto 20th.

Dickerson, J., C. Hagedorn, A. Hassall, and S. Herbein. 2005. An evaluation of beach remediation in Virginia using four bacterial source tracking methods. 105th Annual Meeting of the American Society for Microbiology, Orlando, FL. ASM Abstracts.

Feng, Y., R. U. Wijesinghe and C.W. Wood. 2005. Microbial source tracking as a component of TMDL development. Alabama Water Resources Conference and Symposium. Orange Beach, Alabama.

Hagedorn, C., G. Touchton, B. Crozier, A. Hassall, and J. Dickerson. 2005. Increasing confidence and reliability of library-dependent microbial source tracking methods. 105th Annual Meeting of the American Society for Microbiology, Orlando, FL. ASM Abstracts.

Hartel, P. G., K. Rodgers, G. L. Moody, S. N. J. Hemmings, J. A. Fisher, J. L. McDonald, and C. N. Belcher. 2006. Combining targeted sampling and fluorometry for bacterial source tracking of a freshwater creek. American Society for Microbiology Annual Meeting, May 21-25, Orlando, FL.

Hassall A., C. Hagedorn, M. Saluta, J. Dickerson and S. Herbein. 2005. Microbial source tracking in Virginia's waterways. Annual Meeting of the American Society of Agronomy, Soil Science Society of America, and Crop Science Society of America, Salt Lake City, UT. ASA-CSSA-SSSA Abstracts.

McDonald, J. L., P. G. Hartel, L. C. Gentit, C. N. Belcher, K. W. Gates, K. Rodgers, J. A. Fisher, K. A. Smith, and K. A. Payne. 2006. Identifying sources of fecal contamination inexpensively with targeted sampling and bacterial source tracking. American Society for Microbiology Annual Meeting, May 21-25, Orlando, FL.

Phyars, A.A., L. Qian, and A.K. Graves. 2006. Antibiotic Resistance Profiles of Escherichia coli and Enterococcus sp. Isolated from Nursery Pigs at Different Stages of Development. Sixth annual Arizona More Graduate Education at Mountain States Alliance., April 21, Tempe, AZ.

Wijesinghe, R.U., Y.Feng, D.S. Stoeckel, C.W. Wood. 2005. Comparison of rep-PCR DNA fingerprints of Escherichia coli isolated from multiple sources. The 105th General Meeting Abstracts [CD-ROM]. American society for Microbiology, Washington, DC.

Wijesinghe, R.U., Y. Feng, C.W. Wood and J.N. Shaw. 2005. Genetic variability of rep-PCR DNA fingerprints of Escherichia coli isolated from the Catoma Creek watershed. Annual Meetings Abstracts [CD-ROM]. ASA, CSSA, SSSA, Madison, WI.

Non-Refereed Publications:
Dickerson J., C. Hagedorn, A. Hassall and M. Saluta. 2005. Fluorometric Detection of Optical Brighteners as an Indicator of Human Sources of Water Pollution. Part I. Description and Detection of Optical Brighteners. Crop and Soil Environmental News, November 2005. URL: http://www.ext.vt.edu/news/periodicals/cses/2005-11/part1.html.
Dickerson J., C. Hagedorn, A. Hassall and M. Saluta. 2005. Fluorometric Detection of Optical Brighteners as an Indicator of Human Sources of Water Pollution. Part II. Development as a Source Tracking Methodology in Open Waters. Crop and Soil Environmental News, November 2005. URL: http://www.ext.vt.edu/news/periodicals/cses/2005-11/part2.html.
Proceedings: None

Experiment Stations Bulletins: None

Extension Bulletins:
Hagedorn C., B. Benham and S. Zeckoski. 2005. Microbial Source Tracking and the TMDL Process. URL: http://www.ext.vt.edu/pubs/bse/442-554/442-554.pdf.
Theses:
M.S.: Touchton, Gregory. 2005. Microbial Source Tracking in a Mixed Use Watershed in Northern Virginia. Virginia Tech, Blacksburg VA.

M.S.: Jones, C.M. 2006. Microbial community analysis using two dimensional electrophoresis of bacterial ribosomal internal transcribed spacer regions  methodology and application. Cornell University, Ithaca, NY

M.S.: Wijesinghe. 2005. A molecular approach to determine the origin of fecal bacteria in the Catoma Creek watershed. Auburn University, Auburn, AL.

Newspaper, Magazines, Newsletters, etc.:
Hagedorn C. 2005. Bacterial Source Tracking in Support of TMDLs. Federal Water Quality Association Newsletter, Vol. 31(2), p.5.

Hagedorn C., M. Saluta, A. Hassall and J. Dickerson. 2005. Fluorometric Detection of Optical Brighteners as an Indicator of Human Sources of Water Pollution: Development as a Source Tracking Methodology. Environmental Detection News, Joint Issue 3/4(II), 1-12. URL: http://www.cddc.vt.edu/host/edn/index.html.

Hagedorn C. 2005. Beachgoers Want Answers. Article published in The Free Lance Star (newspaper), Fredericksburg, VA.URL: http://fredericksburg.com/News/FLS/2005/062005/06182005/107237.asp

Hagedorn C. 2005. Pollution Findings Prompt Groups to Clean Streams. Article published in the Winchester Star (newspaper), Winchester, VA. URL: http://www.winchesterstar.com/TheWinchesterStar/050912/Area_pollution.asp.
Hagedorn C. August 12, 2005. Scat Squad: Finding Pollution's Causes. The 14 minute story aired on National Public Radio (NPR), "All Things Considered." URL: http://www.npr.org/templates/story/story.php?storyId=4798461

09/26/2007

07/07/2008

Byappanahalli, M. N., R. L. Whitman, D. A. Shively, J. Ferguson, S. Ishii, and M. J. Sadowsky. 2007. Population structure of Cladophora-borne Escherichia coli in nearshore water of Lake Michigan. Water Res. 41:3649-3654.

Dickerson, J.W. Jr., C. Hagedorn and A. Hassall. 2007. Detection and remediation of human-origin pollution at two public beaches in Virginia using multiple source tracking methods. Water Research 41: 3758-3770.

Dickerson, J.W. Jr., J.B. Crozier, C. Hagedorn and A. Hassall. 2007. Assessment of the 16S-23S rDNA intergenic spacer region in Enterococcus spp. for microbial source tracking. In Press: Journal of Environmental Quality 36:1661-1669.

Edenborn, S.L., and A.J. Sexstone. 2007. DGGE fingerprinting of culturable soil bacterial communities complements culture-independent analyses culture-independent analyses. Soil Biology & Biochemistry. 39:1570-1579.

Gao, H., Z.K. Yang, T.J. Gentry, L. Wu, C.W. Schadt, and J. Zhou. 2007. Microarray-based analysis of microbial community RNAs by whole community RNA amplification. Appl. Environ. Microbiol. 73:563-571.

Gentry T.J., C.W. Schadt, Z. He, and J. Zhou. 2007. Chapter 83, Functional gene arrays for microbial community analysis, p. 1052-1062. In C.J. Hurst, R.L. Crawford, J.L. Garland, D.A. Lipson, A.L. Mills, and L.D. Stetzenbach (ed.). Manual of Environmental Microbiology, Third Edition. ASM Press, Washington, D.C.

Graves, A.K., C. Hagedorn, A. Brooks, R.L. Hagedorn, and E. Martin. 2007. Microbial source tracking in a rural watershed dominated by cattle. Water Research 41: 3729-3739.

Hartel, P. G., K. Rodgers, G. L. Moody, S. N. J. Hemmings, J. A. Fisher, and J. L. McDonald. 2008. Combining targeted sampling and fluorometry to identify human fecal contamination in a freshwater creek. J. Water Health 6:105-116.

Hartel, P. G., S. P. Myoda, K. J. Ritter, R. L. Kuntz, K. Rodgers, J. A. Entry, S. A. Ver Wey, E. C. Schröder, J. Calle, M. Lacourt, J. E. Thies, J. P. Reilly, and J. J. Fuhrmann. 2007. Geographic sharing of ribotype patterns in Enterococcus faecalis for bacterial source tracking. J. Water Health 5:539-551.

Hartel, P. G., J. L. McDonald, L. C. Gentit, K. Rodgers, K. L. Smith, S. N. J. Hemmings, C. N. Belcher, R. L. Kuntz, Y. RiveraTorres, E. Otero, and E. C. Schröder. 2007. Improving fluorometry as a source tracking method to detect human fecal contamination. Estuaries Coasts 30:551-561.

Hartel, Peter G., Charles Hagedorn, Jennifer L. McDonald, Jared A. Fisher, Michael A. Saluta, Jerold W. Dickerson Jr., Lisa C. Gentit, Steven L. Smith, Nehru S. Mantripragada, Kerry J. Ritter, and Carolyn N. Belcher. 2007. Exposing water samples to ultraviolet light improves fluorometry for detecting human fecal contamination. Water Research: 3629-3642.

He, Z., T.J. Gentry, C.W. Schadt, L. Wu, J. Liebich, S.C. Chong, Z. Huang, W. Wu, B. Gu, P. Jardine, C. Criddle, and J. Zhou. 2007. GeoChip: A comprehensive microarray for investigating biogeochemical, ecological, and environmental processes. ISME J. 1:67-77.

Ishii, S., D. L. Hansen, R. E. Hicks, and M. J. Sadowsky. 2007. Beach sand and sediments are temporal sinks and sources of Escherichia coli in Lake Superior. Environ. Sci. Technol. 41:2203-2209.

Ishii, S., K. P. Meyer, and M. J. Sadowsky. 2007. Relationship between Phylogenetic Groups, Genotypic Clusters, and Virulence Gene Profiles of Escherichia coli Strains Isolated from Diverse Human and Animal Sources. Appl. Environ. Microbiol. 73: 5703-5710.

Ksoll, W, B., S. Ishii S, M. J. Sadowsky, and R. E. Hicks. 2007. Presence and sources of fecal coliform bacteria in epilithic periphyton communities of Lake Superior. Appl. Environ. Microbiol. 73:3771-3778.
Salinas, K. A., S. L. Edenborn, A. J. Sexstone and J. B. Kotcon. 2007. Bacterial preferences of the bacterivorous soil nematode Cephalobus brevicauda (Cephalobidae): Effect of bacterial type and size. Pedobiologia. 51(1):55-64.
Van Nostrand, J.D., T.V. Khijniak, T.J. Gentry, M.T. Novak, A.G. Sowder, J.-Z. Zhou, P.M. Bertsch, and P.J. Morris. 2007. Isolation and characterization of four gram-positive nickel-tolerant microorganisms from contaminated sediments. Microb. Ecol. 53:670-682.

Yan, T., M. Hamilton, and M. J. Sadowsky. 2007. High throughput and quantitative procedure for determining sources of Escherichia coli in waterways using host-specific DNA marker genes. Appl. Environ. Microbiol. 73:890896.

Yan, T., and M. J. Sadowsky. 2007. Determining sources of fecal bacteria in waterways. Environ. Monitor. Assess. 129:97-106

Accepted Full Length Articles (Refereed Journals):

Hansen, D. L., J. J. Clark, S. Ishii, M. J. Sadowsky, and R.E. Hicks. 2007. Sources and sinks of Escherichia coli in benthic and pelagic fish. J. Great Lakes Res. In Press.

Sanders, S.M., P. Srivastava, Y. Feng, J.H. Dane, J. Basile, and M.O. Barnett. 2008. Sorption of the veterinary antimicrobials sulfadimethoxine and ormetoprim in soil. J. Environ. Qual. (in press)


In Print Abstracts:

Akiyama T., and Savin, M. C. 2007. Antibiotic-resistant bacteria in a stream receiving wastewater treatment plant effluent. In Annual Meeting South Central Branch American Society for Microbiology, November 2-3, 2007, University of Arkansas at Little Rock, AR.

Caster, S, D. Zuberer, F. Hons, T. Provin, and T. Gentry. 2007. Dissolved organic carbon and nutrients in native soil under three turfgrasses and two sand-based sports-fields. In Abstracts, ASA-CSSA-SSSA Annual Meet., New Orleans, LA. 4-8 November 2007.

Hagedorn, C. 2007. An evaluation of beach remediation in Virginia using four microbial source tracking methods. Invited Plenary Presentation, XXI Congreso Nacional de Microbiologia, Sevilla, Espana, 17-20 septiembre. (paper S15.1.)

Harclerode, C., T. Gentry, and J. Aitkenhead-Peterson. 2007. E.coli and nutrients in Brazos County Carter Creek subcatchments. Bacteria in Our Bayous: Water Quality Standards and Restoration Options. 15-16 October 2007. University of St. Thomas, Houston, TX.

Harclerode, C., K. Wagner, E. Martin, T. Gentry, J. Aitkenhead-Peterson, L. Redmon, and S. Feagley. 2007. Microbial water source contamination. Texas Plant Protection Conference, College Station, TX. 4-5 December 2007.

Hartel, P. G., C. Hagedorn, J. L. McDonald, J. A. Fisher, M. Saluta, J. Dickerson, L. C. Gentit, S. Smith, N. S. Mantripragada, K. J. Ritter, and C. N. Belcher. 2007. Exposing water samples to ultraviolet light improves fluorometry for detecting human fecal contamination. American Society for Microbiology Annual Meeting, May 21-25, Toronto, Canada.

Hassall, A., C. Hagedorn, D. Barker, and P. Yeomans. 2007. Evaluation of a regional Enterococcus library with a blind challenge set. American Society for Microbiology Annual Meeting, May 21-25, Toronto, Canada.

Saluta, M., C. Hagedorn, A. Hassall and Dickerson, J.W. Jr. 2007. Fluorometric detection of optical brighteners in detergents as a human-specific marker in microbial source tracking. American Society for Microbiology Annual Meeting, May 21-25, Toronto, Canada.

Savin, M.C. and T. Akiyama. 2007. Antibiotic resistance in aquatic bacteria downstream from an effluent discharge. In 2007 AWRC Conference Presentation and Poster Abstracts and Bios [CD-ROM]. Arkansas Water Resources Conference, Fayetteville, AR.

Toth, J.D., Z. Dou, J.D. Ferguson, C.F. Ramberg, Jr., C. Wang, S.C. Rankin, Q. Wang, and Y. Feng. 2007. Effect of veterinary pharmaceuticals on metabolic functions of native soil bacteria. Annual Meetings Abstracts [CD-ROM]. ASA, CSSA, SSSA, Madison, WI.

Wade, T. R., C. Hagedorn, M. Saluta, and A. Hassall. 2007. Use of Escherichia coli for microbial source tracking in a mixed-used watershed in northern Virginia. American Society for Microbiology Annual Meeting, May 21-25, Toronto, Canada.

Wagner, K.L., L. Redmon, T. Gentry, and C.A. Jones. 2007. Reducing bacterial contamination of Texas watersheds. USDA-CSREES National Water Conference, Savannah, GA. 28 January  1 February 2007.

Wiechman, R.J., S. R. Seese, and A. J. Sexstone. Genetic Fingerprints of E. coli in Cattle, Sheep, Chickens, and Impacted Soils Within Conventional and Alternative Production Systems. Soil Science Society of America Annual Meetings. November 4-8. New Orleans, Louisiana.

Wijesinghe R.U., Y. Feng, M.R. Owsley, C.W. Wood, and S. Ditchkoff. Evaluation of Escherichia coli rep-PCR DNA fingerprint library for bacterial source tracking. 2007. Annual Meetings Abstracts [CD-ROM]. ASA, CSSA, SSSA, Madison, WI.


Books and Book Chapters:

Feng, Y. 2008. Soil microbiology. In: Encyclopedia of Soil Science, W. Chesworth (ed). Springer Publishing Company, New York, NY.

Proceedings:

Clement Solomon, Joseph Kamalesh, and Alan Sexstone. 2007. Analysis of remote monitored water-use trends in a commercial facility. In. Proceedings of the National Onsite Wastewater Recycling Association (NOWRA) Annual Meeting. March 12-14, 2007. Baltimore, Md. (refereed proceedings, paper # XX-SPE-07-44)

Feng, Y., P. G. Hartel, J. A. Fisher, K. Rodgers, B. Liu, and K.J. Ritter. 2007. Differences in survival among Enterococcus faecalis subspecies in two freshwater creek sediments. p. 603-606. In T. C. Rasmussen, G. D. Carroll, and A. P. Georgakakos (ed.) Proceedings of the 2007 Georgia Water Resources Conference, March 27-29, Athens, GA.

Theses and Dissertations:

Sherie Edenborn. 2007 Molecular and functional characterization of bacterial communities in organic farm and pasture soils. Ph.D. dissertation. Division of Plant & Soil Sciences,. West Virginia University. Morgantown, WV 26506. https://eidr.wvu.edu/eidr/documentdata.eIDR?documentid=5300

09/25/2009

No report, refer to previous year

06/06/2010