SAES-422 Multistate Research Activity Accomplishments Report

Status: Approved

Basic Information

Participants

Les Domier - Illinois Houston Hobbs- Illinois Reza Hajimorad  Tennessee Jing Zhou - Arkansas John Hill - Iowa Steve Whitham- Iowa Feng Qu- Ohio Steven Slack - Ohio

The NCERA-200 2012 annual meeting was held on October 30, 2012 in Ames, Iowa, from 8:30 AM to 1PM. In order to provide the participants with a comprehensive overview of emerging soybean viruses and novel technologies of virus research, this years symposium featured leaders in the areas of virus-induced gene silencing, plant anti-viral resistance, high throughout sequencing-based virus discovery, as well as innovative approaches aimed at controlling insect pests of soybean. The theme of the symposium was: Emerging Diseases and Technologies. The featured speakers this year are, Les Domier of University of Illinois at Chaimpaign, Steve Whitham of Iowa State University, Aardra Kachroo of University of Kentucky, and Bryony Bonning of Iowa State University. The committee is especially grateful to Steve Whitham for the time and efforts he invested to make the symposium a great success. The committee further expressed the gratitude to the United Soybean Board for the financial support, which covered the cost of the room rental, as well as travel costs of one of the speakers. The business meeting took place shortly after the completion of the symposium, with participants from five different states (Illinois, Iowa, Ohio, Arkansas, and Tennessee). Steve Slack, the administrative advisor of NCERA 200 provided a brief assessment of the current status of the group and praised the effort of the group at maintaining the tradition of having an annual symposium component of the annual meeting. He then went on to remind the participants of the need of developing Impact Statements that include illustrative images. The group then went on to discuss the chronic problem of low attendance of annual meetings. It was concluded that the steady decline of the number of plant virologist in the region, as well as shortage of research support, could have contributed to the problem. The consensus reached at the conclusion of the meeting is that we should explore the possibility of coordinating our meeting with the soybean disease multi-state group. Representatives from the states then presented the research updates during the past year. The meeting adjourned at 1PM. The full set of minutes attached includes each state report which also reflects their accomplishments. Please reference the attached minutes for the committee's accomplishments.

Accomplishments

See attached summary of minutes for the complete report that contains the accomplishments of each state within their individual state reports.

Impacts

  1. Distribution and characterization of SVNaV an emerging virus that has recently become widespread in soybean fields in the North Central region. Impacts: The SVNaV is an emerging pathogen of soybean that has recently spread across the northern and southern US. Several members of the NCERA 200 Multistate group pioneered the discovery and characterization of this virus, and they are conducting experiments to establish the potential economic impact of this virus. This discovery not only raised the awareness of growers concerning a new and emerging virus disease, but it has also laid a solid foundation for further evaluation of its economic consequences, paving the way to an IPM strategy for the management of this virus.
  2. The development and optimization of virus-induced gene silencing (VIGS) vectors for use in soybean genomics research. Impacts: Before the BPMV-based VIGS vector became available, genomic analysis of soybean has been very challenging. Transformation of soybean is difficult, making the large scale generation of over-expressing or knockout lines impractical. The availability of BPMV-based VIGS vector allowed for high-throughput analysis of the functions of hundreds of soybean genes. This highly useful tool has led to NSF and commodity support that funds a collaborative effort to unravel the resistance mechanism of soybean to diverse pathogens including soybean rust, SMV, and soybean cyst nematode.
  3. Transgenic soybean plants resistant to three common viruses successfully generated. Impact: Successful field testing will allow for the eventual release of the virus-resistant transgenic plants 6to soybean growers, significantly alleviating soybean yield losses caused by viruses. This will in turn improve the economic well being of soybean growers in the region and throughout US.

Publications

Zhang, X., Sato, S.. Ye, X., Dorrance, A. E., Morris, T. J., Clemente, T. E., and Qu, F. 2011. Robust RNAi-based resistance to mixed infection of three viruses in soybean plants expressing separate short hairpins from a single transgene. Phytopathology 101, 1264-1269. Han, J., Domier, L. L., Dorrance, A. E., and Qu, F. (2012). Complete genome sequence of a novel pararetrovirus isolated from soybean. Journal of Virology 86, 9555. Nam, M., Koh, S., Kim, S. U., Domier, L. L., Jeon, J. H., Kim, H. G., Lee, S. H., Bent, A. F., and Moon, J. S. 2011. Arabidopsis TTR1 causes LRR-dependent lethal systemic necrosis, rather than systemic acquired resistance, to Tobacco ringspot virus. Molec. Cells 32(5), 421-429. Han. J., Domier, L. L., Dorrance, A., and Qu, F. 2012.Complete genome sequence of a novel pararetrovirus isolated from soybean. J. Virol. 86(17), 9555. Hill, C. B., Chirumamilla, A. and Hartman, G. L. 2012. Resistance and virulence in the soybean-Aphis glycines interaction Euphytica 186: 635-646. Hobbs, H.A., Domier, L. L. and Nelson, B. D. 2012.First Report of Alfalfa mosaic virus and Soybean dwarf virus on Soybean in North Dakota. Plant Dis. doi:10.1094/PDIS-07-12-0673-PDN. Hobbs, H. A., Jossey, S., Wang, Y., Hartman, G. L., and Domier, L. L. 2012.Diverse soybean accessions identified with temperature-sensitive resistance to Tobacco streak virus. Crop Sci. 52(2), 738-744. Lim, H. S., Jang, C. Y., Nam, J., Li, M., Hong, J. S., Bae, H., Ju, H. J., Kim, H. G., Ford, R. E., and Domier, L. L. 2012. Characterization of the in vitro activities of the P1 and helper component proteases of Soybean mosaic virus strain G2 and Tobacco vein mottling virus. Plant Pathol. J. 28(2), 197-201. McClellan, M. S., Domier, L. L., and Bailey, R. C. 2012. Label-free virus detection using silicon photonic microring resonators. Biosen. Bioelec. 31(1), 388-392. Pandey, A. K., Yang, C., Zhang, C., Graham, M., Horstman, H. D., Lee, Y., Zabotina, O. A., Hill, J. H., Pedley, K. F., and Whitham, S. A. 2011. Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2. MPMI 24:194-206. Hajimorad, M. R., Wen, R.-H., Eggenberger, A. L., Hill, J. H., and Saghai Maroof, M. A. 2011. ExperimentalAdaptation of an RNA Virus Mimics Natural Evolution. J. Virol. 85:2557-2564. Pandey, A. K., Yang, C., Zhang, C., Graham, M. A., Horstman, H. D., Lee, Y., Zabotina, O. A., Hill, J. H., Pedley, K. F., and Whitham, S. A. 2011. Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2. Mol. Plant Microbe Interact. 24: 194206. Bradshaw, J. D., Zhang, C., Hill, J. H., and Rice, M. E. 2011. Landscape epidemiology of Bean pod mottle comovirus: Molecular evidence of heterogeneous sources. Arch Virol. 156:1615-1619. He, B., Hill, J. H., and Hajimorad, M. R. 2011. Factors to improve detection of Alfalfa mosaic virus in soybean. Online. Plant Health Progress doi: 10.1094/PHP-2010-0926-02-RS. Chowda-Reddy, R. V., Sun, H., Hill, J., Poysa, V., and Wang, A. 2011. Simultaneous mutations in multi-viral proteins are required for an avirulent Soybean mosaic virus isolate to gain virulence n Rsv1-, Rsv3-, and Rsv4-genotype soybeans. PloS ONE 6(11): e28342. doi:10.1371/journal.pone.00283 Haidi, B., Bradshaw, J., Rice, M., and Hill, J. 2012. Bean leaf beetle (Coleoptera:Chrysomelidae) and Bean pod mottle virus in soybean: Biology, ecology, and management. Journal of Integrated Pest Management. DOI: http://dx.doi.org/10.1603/IPM11007 Liu, J-Z., Horstman, H. D., Braun, E., Graham, M. A., Zhang, C., Navarre, D., Qiu, W-L., Lee, Y., Nettleton, D., Hill, J. H., and Whitham, S. A. 2011. Soybean homologs of MPK4 negatively regulate defense responses and positively regulate growth and development. Plant Physiology 157:1363-1378. Zhang, C., Grosic, S., Whitham, S. A., and Hill, J. H. 2012. The Requirement of Multiple Defense Genes in Soybean Rsv1Mediated Extreme Resistance to Soybean mosaic virus. Molecular Plant Microbe Interact. 25:1307-1313. Juvale, P. S., Hewezi, T., Zhang, C., Kandoth, P. K., Mitchum, M. G., Hill, J. H., Whitham, S. A., and Baum, T. J. 20112. Temporal and spatial Bean pod mottle virus-induced gene silencing in soybean. Journal of Molecular Plant Pathology. DOI: 10.1111/J.1364-3703.2012.00808.X Liu, S., Kandoth, P. K., Warren, S. D., Yeckel, G., Heinz, R., Alden, J., Yang, C., Aziz, J., El-Mellouki, T., Juvale, P. S., Hill, J., Baum, T. J., Cianzio, S., Whitham, S. A., Korkin, D., Mitchum, M., and Meksem, K. 2012. A soybean cyst nematode resistance gene points to a new mechanism of plant resistance to pathogens. Nature. DOI:10.1038/nature11651 Khatabi, B., Wen, R.-H., Hershman, D. E., Kennedy, B. S., Newman, M. A., and Hajimorad, M. R. 2012. Generation of polyclonal antibodies and serological analyses of nucleocapsid protein of Soybean vein necrosis-associated virus: A distinct soybean infecting tospovirus serotype. European Journal of Plant Pathology 133, 783-790. Khatabi, B., He, B., and Hajimorad, M. R. 2012. Diagnostic potential of polyclonal antibodies against bacterially expressed recombinant coat protein of Alfalfa mosaic virus in soybean. Plant Disease 96, 1352-1357. Khatabi, B., Fajolu, O. L., Wen, R.-H., and Hajimorad, M. R. 2012. Evaluation of North American isolates of Soybean mosaic virus for gain of virulence on Rsv-genotype soybeans with special emphasis on resistance-breaking determinants on Rsv4. Molecular Plant Pathology 13, 1077-1088.
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