W1147: Managing Plant Microbe Interactions in Soil to Promote Sustainable Agriculture

(Multistate Research Project)

Status: Inactive/Terminating

SAES-422 Reports

11/27/2004

12/20/2004

ALASKA

Cheng, M., Gay, P. A, and McBeath, J. H. 2004. Enzyme profiles associated with a cold tolerant Trichoderma atroviride during low temperature biocontrol of pathogenic fungi. Phytopathology 94:S18.

Cheng, M., Gay, P. A. and McBeath, J. H. 2004. Trichoderma atroviride strain biotype 603, ATCC 74018 73 kDa N-acetyl-D-glucosaminidase gene, partial cds. GenBank Accession Number: AY646221, National Center for Biotechnology Information, Bethesda, MD.

Cheng, M., Gay, P. A. and McBeath, J. H. 2004. Trichoderma atroviride strain biotype 453, ATCC 74016 73 kDa N-acetyl-D-glucosaminidase gene, partial cds. GenBank Accession Number: AY612745, National Center for Biotechnology Information, Bethesda, MD.

Cheng, M., Gay, P. A. and McBeath, J. H. 2004. Trichoderma atroviride strain biotype 861, ATCC 74015 73 kDa N-acetyl-D-glucosaminidase gene, partial cds. GenBank Accession Number: AY646222, National Center for Biotechnology Information, Bethesda, MD.

Gay, P. A. and McBeath, J.H. 2004. Solanum tuberosum cultivar German Butterball late blight resistance gene, partial sequence. GenBank Accession Number: AY582921, National Center for Biotechnology Information, Bethesda, MS.

McBeath, J. H., Cheng, M., Gay, P., Ma, M., and Alden, J. 2004. First report of Leptographium abietinum associated with blue stain on declining western Siberian larch in Alaska. Online. Plant Health Progress doi: 10. 1094/PHP-2004-0326-01-HN.

Gay, P. A. and McBeath, J.H. 2004. Solanum tuberosum cultivar 24-3 late blight resistance gene, partial sequence. GenBank Accession Number: AY582922, National Center for Biotechnology Information, Bethesda, MS.

Gay, P. A. and McBeath, J.H. 2004. Solanum tuberosum cultivar Yellow Finn late blight resistance gene, partial sequence. GenBank Accession Number: AY582923, National Center for Biotechnology Information, Bethesda, MS.

Gay, P. A. and McBeath, J.H. 2004. Solanum tuberosum cultivar Reba glutathione S-transferase cold induced gene, partial sequence. GenBank Accession Number: AY582924, National Center for Biotechnology Information, Bethesda, MS.

Gay, P. A. and McBeath, J.H. 2004. Solanum tuberosum cultivar 772 late blight resistance gene, partial sequence. GenBank Accession Number: AY582925, National Center for Biotechnology Information, Bethesda, MS.

Gay, P. A. and McBeath, J.H. 2004. Solanum tuberosum cultivar Snow Chip late blight resistance and cold induced glutathione S-transferase genes, partial sequence. GenBank Accession Number: AY582926, National Center for Biotechnology Information, Bethesda, MS.

Gay, P. A. and McBeath, J.H. 2004. Solanum tuberosum cultivar Iditared late blight resistance gene, partial sequence. GenBank Accession Number: AY582927, National Center for Biotechnology Information, Bethesda, MS.

Gay, P.A., McBeath, J.H. and Yokogi, T. 2004. Urocystis agropyri large subunit ribosonal RNA gene, partial sequence. GenBank Accession Number: AY547283, National Center for Biotechnology Information, Bethesda, MS.

ARIZONA

Morello, JE, Pierson, EA, and LS Pierson III. 2004. Negative cross-communication among wheat rhizosphere bacteria: Effect on antibiotic production by the biological control bacterium Pseudomonas aureofaciens 30-84. Appl. Environ. Microbiol. 70:3103-3109.

McLean RJ, Pierson LS III, Fuqua C. 2004. A simple screening protocol for the identification of quorum signal antagonists. J Microbiol Methods. 58:351-360.

Wijeratne EM, Carbonezi CA, Takahashi JA, Seliga CJ, Turbyville TJ, Pierson EE, Pierson LS III, VanEtten HD, Whitesell L, Bolzani Vda S, Gunatilaka AA. 2004. Isolation, optimization of production and structure-activity relationship studies of monocillin I, the cytotoxic constituent of Paraphaeosphaeria quadriseptata. Antibiot (Tokyo).57:541-546.

Zhan J, Wijeratne EM, Seliga CJ, Zhang J, Pierson EE, Pierson LS III, Vanetten HD, Gunatilaka AA. 2004. A new anthraquinone and cytotoxic curvularins of a Penicillium sp. from the rhizosphere of Fallugia paradoxa of the Sonoran desert. J Antibiot (Tokyo). 57:341-344.

He, J, Wijeratne, EMK, Bashyal, BP, Zhan, J, Seliga, CJ, Liu, MX, Pierson, EA, Pierson, LS III, VanEtten, HD, Ginatilaka, AAL. 2004. Cytotoxic and other metabolites of Aspergillus inhabiting the rhizosphere of Sonoran Desert plants. J. Nat. Prod. (in press).

CALIFORNIA

Becker, J.O., and J. Borneman 2004. Decoding the nature of a nematode-suppressive soil. Phytopathology 94:S129 (Abstr.).

Becker, J.O, and J. Borneman 2004. Analysis of biological nematode population control: a case study. California Conference on Biological Control IV (Ed. M.S. Hoddle), Berkeley, CA, 23-27.

Borneman, J., R. Olatinwo, B. Yin, and J.O. Becker 2004. An experimental approach for identifying microorganisms involved in specified functions: utilization for understanding a nematode suppressive soil. Australasian Plant Pathology 33:151-155.

Chen, X., and J.O. Becker 2004. Dactylella oviparasitica as biocontrol agent for Meloidogyne incognita in tomato. Proceedings 15th International Plant Protection Congress, Beijing, China May 11-16,2004, p. 158 (Abstr.).

El-Hamalawi, Z.A., and Stanghellini, M.E. 2004. Disease development on lisianthus (Eustoma grandiflorum) following aerial transmission of Fusarium avenaceum by adult shore flies, fungus gnats, and moth flies. Phytopathology 94:S27.

McDonald, V.T. and J.A. Menge. 2004. Microbial suppression of Phytophthora cinnamomi in avocado soils. Phytopathology 94:S68 (Abstr.).

Menge, J.A. and McDonald, V.T. 2004. Management of soil microorganisms for the control of Phytophthora root rot. Phytopathology 94:S125 (Abstr.).

Olatinwo, R.O., B. Yin, J.O. Becker, and J. Borneman. 2004. An approach for identifying microorganisms involved in soil suppressiveness: utilization for identifying microorganisms that suppress the plant-parasitic nematode, Heterodera schachtii. Phytopathology 94:S78 (Abstr.).

Pagliaccia, D., Merhaut, D., and Stanghellini, M.E. 2004. Enhancement of the fluorescent pseudomonad population after amending the recirculating nutrient solution of hydroponically-grown plants with a nitrogen stabilizer. Phytopathology 94:S80.

Radewald,K.C., Ferrin, D.M., and Stanghellini, M.E. 2004. Sanitation practices that inhibit reproduction of Monosporascus cannonballus in melon roots left in the field after crop termination. Plant Pathology 53:660-668.

Stanghellini, M.E., Waugh, M.M., Radewald, K.C., Kim, D.H., Ferrin, D.M. and Turini, T. 2004. Crop residue destruction strategies that enhance rather than inhibit reproduction of Monosporascus cannonballus. Plant Pathology 53:50-53.

Stanghellini, M.E., Kim, D.H., Waugh, M.M., Ferrin, D.M., Alcantara, T. and Rasmussen, S.L. 2004. Infection and colonization of melon roots by Monosporascus cannonballus in two cropping seasons in Arizona and California. Plant Pathology 53:54-57.

Stanghellini, M.E., and El-Hamalawi, Z.A. 2004. Efficacy of Beauveria bassiana on colonized millet seed as a biopesticide for the control of shore flies in greenhouses. Phytopathology 94:S98.

Yin, B.A., A.J. Scupham, J.A. Menge, and J. Borneman. 2004. Identifying microorganisms similar to that of the pathogen: a new investigative approach for discovering biocontrol organisms. Plant and Soil 259:19-27.


MONTANA

Yang, Y., Chang, K. F., Hwang, S. F., Callan, N. W., Howard, R. J., and Blade, S. F. 2004. Biological control of Pythium damping-off in Echinacea angustifolia with Trichoderma species. Zeitschrift fur Pflanzenkrankheiten and Pflanzenschutz 111:126-136.


NEW YORK

Abawi, G. S., J. W. Ludwig, and C. H. Petzoldt. 2004. Assessing root health by a soil bioassay with beans as an indicator of soil health. Phytopathology 94 (Suppl.): S1 (Abstr. #579B).

Abawi, G. S. 2004. Soil; Health Program Work Team at Cornell. PP. 35-36. Proceedings III, Empire State Fruit & Vegetable Expo, CCE, Cornell University, Ithaca, NY.

Abawi, G. S. and J. W. Ludwig. 2004. Beet diseases, management options and research results, 2003. PP. 106-108. Proceedings III, Empire State Fruit & Vegetable Expo, CCE, Cornell University, Ithaca, NY.


OREGON

Anderson, L.M., Stockwell, V.O., and Loper, J.E. 2004. An extracellular protease of Pseudomonas fluorescens Pf-5 inactivates antibiotics of Pantoea agglomerans. Phytopathology 94:1228-1234.

Brodhagen, M., Henkels, M. D., and Loper, J. E. 2004. Positive autoregulation of the antibiotic pyoluteorin in the biological control organism Pseudomonas fluorescens Pf-5. Appl. Environ. Microbiol. 70:1758-1766.

Hansen, E. M., Parke, J. L., and Sutton, W. 2004. Susceptibility of Oregon forest trees and shrubs to Phytophthora ramorum: a comparison of artificial inoculation and natural infection. Plant Dis. (in press).

Lewis, C. D., Roth, M. L., Choquette, C. J. and Parke, J.L. 2004. Root infection of rhododendron by Phytophthora ramorum. Phytopathology 94:S60 (Abstr.)

Parke, J., Frankel, S., Alexander, J. and Thomas, C. 2004. Phytophthora ramorum Educate to Detect (PRED) Program. http://www.ncipmc.org/sod/

Parke, J. L., Linderman, R. G., Osterbauer, N. K., and Griesbach, J. A. 2004. Detection of Phytophthora ramorum blight in Oregon nurseries and completion of Kochs Postulates on Pieris, Rhododendron, Viburnum, and Camellia. Plant Dis. 88:87.

Parke, J., Pscheidt, J., and Linderman, R. 2004. Phytophthora ramorum: a guide for Washington nurseries. 8 pp. Washington State Nursery and Landscape Association.

Parke, J. L. and Roth, M. L. 2004. Relative virulence of Phytophthora ramorum isolates in Oregon. Phytopathology 94:S81 (Abstr.).

Parke, J. L., Roth, M. L., Lewis, C. and Choquette, C.J. 2004. Infection of Rhododendron macrophyllum roots, stems, and leaves by soilborne inoculum of Phytophthora ramorum. Proceedings, IUFRO Conference on Phytophthora in Forests, Freising, Germany, Sept. 11-17.

Temple, T., Stockwell, V.O., Loper, J.E., and Johnson, K.B. 2004. Bioavailability of iron to Pseudomonas fluorescens strain A506 on flowers of pear and apple. Phytopathology 94:1286-1294.

WASHINGTON

Ahuja, E. G., Mavrodi, D. V, Thomashow, L. S., and Blankenfeldt, W. 2004. Overexpression, purification and crystallization of PhzA, the first enzyme of the phenazine biosynthesis pathway of Pseudomonas fluorescens 2-79. Acta Crystallogr. D 60:1129-1131.

Allende-Molar, R., Landa, B. B., and Weller, D. M. 2004. Long-term survival of different genotypes of 2,4-diacetylphloroglucinol (DAPG)-producing Pseudomonas fluorescens in soil. Phytopathology 94:S4 (Abstr.).

Blankenfeldt, W., Kuzin, A., Skarina, T., Korniyenko, Y., Tong, L., Bayer, P., Janning, P., Thomashow, L. S., and Mavrodi, D. V. 2004. Structure and function of the phenazine biosynthetic protein PhzF from Psesudomonas fluorescens. Proc. Natl. Acad. Sci. USA 101:16431-16436.

Blouin Bankhead, S., Brown, A., Son, M. Y., Thomashow, L. S., and Weller, D. M. 2004. Population dynamics and non-target effects of transgenic Pseudomonas fluorescens in the rhizosphere of wheat and pea. Phytopathology 94:S8 (Abstr.).

Blouin-Bankhead, S., Landa, B., Lutton, E., Weller, D. M., and McSpadden Gardener, B. B. 2004. Minimal changes in rhizobacterial population structure following root colonization by wild type and transgenic biocontrol strains. FEMS Microbiology Ecol. 49:307-318.

De La Fuente, L., Landa, B. B., Thomashow, L. S., and Weller, D. M. 2004. Dynamics of rhizosphere competition among genotypes of 2,4-diacetylphlorogucinol (DAPG)-producing Pseudomonas fluorescens depends on the host crop. Phytopathology 94:S24 (Abstr.).

De La Fuente, L., Thomashow, L. S., Weller, D. M., Bajsa, N., Quagliotto, L., Chernin L., and Arias, A. 2004. Pseudomonas fluorescens UP61 isolated from birdsfoot trefoil rhizosphere produces multiple antibiotics and exerts a broad spectrum of biocontrol activity. Eur. J. Plant Pathol. (in press).

Higginbotham, R. W., Paulitz, T. C., and Kidwell, K. K. 2004. Virulence of Pythium species isolated from wheat fields in eastern Washington. Plant Dis. 88:1021-1026.

Higginbotham, R. W., Paulitz, T. C., Campbell, K. G. and Kidwell, K. K. 2004. Evaluation of adapted wheat cultivars for tolerance to Pythium root rot. Plant Dis. 88:1027-1032.

Huang, Z., Bonsall, R. F., Mavrodi, D. V., Weller, D. M., and Thomashow, L. S. 2004. Transformation of Pseudomonas fluorescens with genes for biosynthesis of phenazine-1-carboxylic acid improves biocontrol of Rhizoctonia root rot and in situ antibiotic production. FEMS Microbiol. Ecol. 49:243-251.

Mavrodi, D. V., Bleimling, N., Thomashow, L. S., and Blankenfeldt, W. 2004. The purification, crystallization and preliminary structural characterization of PhzF, a key enzyme in the phenazine-biosynthesis pathway from Pseudomonas fluorescens 2-79. Acta Crystallogr. D 60:184-186.

Mavrodi, D., Validov, S., Mavrodi, O., De La Fuente, L., Boronin, A., Weller, D., and Thomashow, L. 2004. Bacteriocin activity among 2,4-diacetylphloroglucinol (DAPG)-producing fluorescent Pseudomonas spp. Phytopathology 94:S67 (Abstr.).

Mavrodi, O. V., Mavrodi, D. V., Weller, D. M., and Thomashow L. S. 2004. Role of sss recombinase and dsbA in root colonization by Pseudomonas fluorescens Q8r1-96. Phytopathology 94:S67 (Abstr.).

Okubara, P., and Paulitz, T. C. 2004. Simultaneous identification and quantification of Rhizoctonia solani and R. oryzae from root samples using real-time PCR. Phytopathology 94:S77 (Abstr.).

Okubara, P.A., and Skinner, D.Z. 2004. Microarray expression profiles of wheat roots and shoots during cold stress and root colonization by Pseudomonas fluorescens. Plant Biology 2004, Abstract No. 694 (Abstr.).

Okubara, P.A., Kornoely, J.P., and Landa, B.B. 2004. Rhizosphere colonization of hexaploid wheat by Pseudomonas fluorescens strains Q8r1-96 and Q2-87 is cultivar-variable and associated with changes in gross root morphology. Biological Control, vol. 30, p. 392-403.

Paulitz, T. C. and Rossi, R. E. 2004. Spatial distribution of Rhizoctonia solani and Rhizoctonia oryzae at three different scales in direct-seeded wheat. Can. J. Plant Path. 26:419 (Abstr.).

Paulitz, T. C. And Schroeder, K. L. 2004. A method for the quantification of Rhizoctonia solani and Rhizoctonia oryzae from soil using toothpicks. Phytopathology 94:S82 (Abstr.).

Paulitz, T. C., Dugan, F., Chen, W., and Grünwald, N. J. 2004. First report of Pythium irregulare on lentils in the United States. Plant Disease 88:310.

Schroeder, K. L. and Paulitz, T. C. 2004. Real-time PCR identification of Pythium spp. from cereals in eastern Washington. Phytopathology 94:S94 (Abstr.).

Thomashow, L. S., Delaney, S. M., Mavrodi, D. V., and Weller, D. M. 2004. Sequences encoding phzO and methods. United States Patent No. 6,737,260 B1 (Patent).

Validov, S., Mavrodi, O., De La Fuente, L., Boronin, A., Weller, D., Thomashow, L., and Mavrodi, D. 2004. Antagonistic activity among 2,4-diacetylphloroglucinol-producing fluorescent Pseudomonas spp. FEMS Microbiol. Lett. (in press).

Weller, D. M., van Pelt, J. A., Mavrodi, D. V., Pieterse, C. M. J., Bakker, P. A. H. M., and van Loon, L. C. 2004. Induced systemic resistance (ISR) in Arabidopsis against Pseudomonas syringae pv. tomato by 2,4-diacetylphloroglucinol (DAPG)-producing Pseudomonas fluorescens. Phytopathology 94:S108 (Abstr.).

01/19/2006

12/31/2006

01/09/2008

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