02/01/2018

02/09/2019

Publications

 

Abdullah S, Halterman D. 2018. “Methods for Transient Gene Expression in Wild Relatives of Potato,” in Plant Pathogenic Fungi and Oomycetes, vol. 1848, Methods in Molecular Biology, W. Ma, T. Wolpert, Eds., New York City: Humana Press. pp. 131–138.

Bali S, Patel G, Novy R, Vining K, Brown C, Holm D, Porter G, Endelman J, Thompson A, Sathuvalli V. 2018. Evaluation of genetic diversity among Russet potato clones and varieties from breeding programs across the United States. PLoS ONE 13(8):e0201415.

Bali S, Robinson BR, Sathuvalli V, Bamberg JB, Goyer A. 2018. Single nucleotide polymorphism markers associated with high folate content in wild potato species. PLoS ONE 13(2):e0193415

Bamberg, J.B.  2018.  Diurnal alternating temperature improves germination of some wild potato (Solanum) botanical seedlots.  American Journal of Potato Research 95:368-373.

 

Bisognin, D. A., N. C. Manrique-Carpintero, and D. S. Douches. 2018. QTL Analysis of Tuber Dormancy and Sprouting in Potato. American Journal of Potato Research 95:374–382. https://doi.org/10.1007/s12230-018-9638-0

 

Crossley, M.S., S.D. Schoville, D.M. Haagenson, and S.H. Jansky. 2018. Host plant resistance to Colorado potato beetle (Coleoptera:Chrysomelidae) in diploid F2 families derived from crosses between cultivated and wild potato. Journal of Economic Entomology.  doi: 10.1093/jee/toy120

 

Deperi, S. I., Ma. E. Tagliotti, M. Cecilia Bedogni, N. C. Manrique-Carpintero, J. Coombs, R. Zhang, D. Douches, and M. A. Huarte. 2018. Discriminant analysis of principal components and pedigree assessment of genetic diversity and population structure in a tetraploid potato panel using SNPs. PloS One 13:e0194398.

 

Ellis, D., O. Chavez, J. J. Coombs, J. V. Soto, R. Gomez, D. S. Douches, A. Panta, R. Silvestre, and N. L. Anglin. 2018. Genetic Identity in Genebanks: Application of the SolCAP 12K SNP Array in Fingerprinting and Diversity Analysis in the Global In Trust Potato Collection. Genome 61:523-537.

 

Enciso-Rodriguez, F., D. Douches, M. Lopez-Cruz, J. Coombs, and G.de los Campos. 2018. Genomic Selection for Late Blight and Common Scab Resistance in Tetraploid Potato (Solanum tuberosum). G3: Genes, Genomes, Genetics 8:2471-2481.

 

Endelman JB, Schmitz Carley CA, Bethke PC, Coombs JJ, Clough ME, da Silva WL, De Jong WS, Douches DS, Frederick CM, Haynes KG, Holm DG, Miller JC, Muñoz PR, Navarro FM, Novy RG, Palta JP, Porter GA, Rak KT, Sathuvalli VR, Thompson AL, Yencho GC. 2018. Genetic variance partitioning and genome-wide prediction with allele dosage information in autotetraploid potato. Genetics 209:77–87.

 

Graebner RC, Brown CR, Ingham RE, Hagerty CH, Mojtahedi H, Quick RA, Hamlin LL, Wade N, Bamberg JB, Sathuvalli V. 2018. Resistance to Meloidogyne chitwoodi identified in wild potato species.  American Journal of Potato Research 95:679-686.

 

Hirsch RL, Miller S, Halterman D. 2018. An inquiry-based investigation of bacterial soft rot of potato. The American Biology Teacher. 80: 594-599.

 

Jansky, S., D. Douches, and K. Haynes. 2018. Transmission of scab resistance to tetraploid potato via unilateral sexual polyploidization. American Journal of Potato Research. 95:272-277.

 

Jansky, S., D. Douches, and K. Haynes. 2018. Three tetraploid clones with resistance to common scab. American Journal of Potato Research. 95:178-182.

 

Jansky, S.H. and D.M. Spooner. 2018. The evolution of potato breeding. Plant Breeding Reviews. 41:169-214.

 

Leisner, C. P., J. P. Hamilton, E. Crisovan, N. C. Manrique‐Carpintero, A. P. Marand, L. Newton, G. M. Pham et al. 2018. Genome sequence of M6, a diploid inbred clone of the high‐glycoalkaloid‐producing tuber‐bearing potato species Solanum chacoense, reveals residual heterozygosity. The Plant Journal 94:562-570.

 

Li, M., H. An, A. Ruthie, C. Bagaza, A. Batushansky, L. Clark, V. Coneva, M.J. Donoghue, E.

            Edwards, D. Fajardo, H. Fang, M. H. Frank, T. Gallaher, S. Gebken, T. Hill, S. Jansky, B. Kaur, P. C. Klahs, L. L. Klein, V. Kuraparthy, W. C. Otoni, J. C. Pires, E. Rieffer, S. Schmerler, E. Spriggs, C. N. Topp, A. van Deynze, K. Zhang, L. Zhu, B.M. Zink, and D. H. Chitwood. 2018. Topological data analysis as a morphometric method: Using persistent homology to demarcate a leaf morphospace. Frontiers in Plant Science 9:1-14.

 

Majeed, N., B. Javaid, F. Deeba, S. Muhammad Sa. Naqvi, and D. S. Douches. 2018. Enhanced Fusarium oxysporum f. sp. tuberosi Resistance in Transgenic Potato Expressing a Rice GLP Superoxide Dismutase Gene. American Journal of Potato Research  95:383–394. https://doi.org/10.1007/s12230-018-9639-z

 

Mambetova, S., W. W. Kirk, N. Rosenzweig, and D. S. Douches. 2018. Characterization of Late Blight Resistance Potato Breeding Lines with the RB Gene from Solanum bulbocastanum. American Journal of Potato Research 95:564–574. https://doi.org/10.1007/s12230-018-9664-y

 

Manrique-Carpintero, N. C., J. J. Coombs, G. M. Pham, F. P. E. Laimbeer, G. T. Braz, J. Jiang, R.E. Veilleux, C. R. Buell, and D. S. Douches. 2018. Genome reduction in tetraploid potato reveals genetic load, haplotype variation, and loci associated with agronomic traits. Frontiers in Plant Science 9, 944.

 

Schmitz Carley CA, Coombs JJ, Clough ME, De Jong WS, Douches, Haynes KG, Higgins CR, Holm DG, Miller Jr. JC, Navarro FM, Novy RG, Palta JP, Parish DL, Porter GA, Sathuvalli VR, Thompson AL, Yencho GC, Zotarelli L, Endelman JB. 2018. Genetic covariance of environments in the National Chip Processing Trial. Crop Science, published online ahead of print, Nov. 8, 2018. doi: 10.2135/cropsci2018.05.0314

 

Tai H, De Koeyer D, Sønderkær M, Hedegaard S, Lägue M, Goyer C, Nolan L, Davidson C, Gardner K, Neilson J, Paudel J, Murphy A, Bizimungu B, Wang HY, Xiong X, Halterman D, and Nielsen KL. 2018. Verticillium dahliae disease resistance and the regulatory pathway for tuberization in potato. The Plant Genome. 11: 170040.

 

Tagliotti, M. E., S. I. Deperi, M. C. Bedogni, R. Zhang, N. C. Manrique Carpintero, J. Coombs, D. Douches, and M. A. Huarte. 2018. Use of easy measurable phenotypic traits as a complementary approach to evaluate the population structure and diversity in a high heterozygous panel of tetraploid clones and cultivars. BMC Genetics 19:8.

 

Wu S, Zhang B, Keyhaninejad N, Rodriguez G, Kim H, Chakrabarti M, Illa-Berenguer E, Taitano N, Jose Gonzalo M, Diaz A, Pan Y, Leisner C, Halterman D, Buell CR, Weng Y, Jansky S, van Eck H, Willemsen J, Monforte A, Meulia T, and van der Knaap E. 2018. A common genetic mechanism underlies morphological diversity in fruits and other plant organs. Nature Communications. 9:4734.

 

Yong, YS and SH Jansky. 2018. Considerations for selecting disease resistant wild germplasm: Lessons from a case study of resistance to bacterial soft rot and Colorado potato beetle. Genetic Resources and Crop Evolution. 65:2287-2292.

 

07/29/2020

Publications

 

Alsahlany, M., D. Zarka, J. Coombs, and D. Douches. 2019. Comparison of methods to distinguish diploid and tetraploid potato for applied diploid breeding. American Journal of Potato Research.  https://doi.org/10.1007/s12230-018-09710-7.

 

Caraza-Harter MV, Endelman JB (2019) Image-based phenotyping and genetic analysis of potato skin set and color. Crop Science, doi:10.2135/cropsci2019.07.0445

 

Enciso-Rodriguez F, Manrique-Carpintero NC, Nadakuduti SS, Buell CR, Zarka D and Douches D (2019) Overcoming Self-Incompatibility in Diploid Potato Using CRISPR-Cas9. Front. Plant Sci. 10:376. doi: 10.3389/fpls.2019.00376.

 

Fulladolsa, A.C., A. Charkowski, X. Cai, J. Whitworth, S. Gray, and S.H. Jansky. 2019. Germplasm with Resistance to Potato Virus Y Derived from Solanum chacoense: Clones M19 (39-7) and M20 (XD3). American Journal of Potato Research. 96:390-395.

 

Jansky, S., Haynes, K. & Douches, D. Am. J. Potato Res. (2019) Comparison of Two Strategies to Introgress Genes for Resistance to Common Scab from Diploid Solanum chacoense into Tetraploid Cultivated Potato. https://doi.org/10.1007/s12230-018-09711-6.

 

Satya Swathi Nadakuduti, Colby Starker, Dae Kwan Ko, Thilani B. Jayakody, C. Robin Buell,

Daniel F. Voytas and David S. Douches (2019). Evaluation of methods to assess in vivo activity

of engineered genome-editing nucleases in protoplasts. Frontiers in Plant Science, 10: 110.

 

Satya Swathi Nadakuduti, Colby Starker, C. Robin Buell, Daniel F. Voytas and David S.

Douches (2019) “Genome editing in potato with CRISPR/Cas9”, Plant Genome Editing with

CRISPR Systems: Methods and protocols, Methods in Molecular Biology, Springer Nature

1917: 183-201 (Book chapter).

 

 

 

 

01/01/1970

03/07/2022