03/02/2015

01/15/2016

Alston, D. G., 2015. Growing cover crops for pest management. Utah Pests News, Utah State    University Extension, 9(Fall). http://utahpests.usu.edu/files/uploads/UtahPests-Newsletter-fall15.pdf

Asselin, J.E., J.M. Bonasera, and S.V. Beer. 2016. PCR Primers for detection of Pantoea ananatis, Burkholderia spp., and Enterobacter sp. from onion. Plant Disease. 100: 1-11.

Asselin, J. E., J.M. Bonasera, and S.V. Beer. 2015. New York bacterial rot research update: Critical factors. Onion World 31(3):20-23.

Buckland, K., Alston, D. G., Reeve, J., Nischwitz, C., & Drost, D. T. Trap crops in onion to reduce onion thrips and Iris yellow spot virus: Environmental Entomology/Entomological Society of America. (Submitted).

du Toit, L.J. and Derie, M.L. 2015. 2014 Onion pink root Serenade Soil efficacy trial, Connell, WA. Research report submitted to Bayer CropScience, Feb. 2015. 4 pp.

du Toit, L.J., Waters, T., and Reitz, S. 2016. Internal dry scale and associated bulb rots of onion. Extension Bulletin PNW 686. In press.

du Toit, L.J., Waters, T., and Reitz, S. 2015. Internal dry scale and associated bulb rots: Bane of the 2014 Pacific Northwest onion season. Onion World May/June 2015:4-7.

Gill, H.K., H. Garg, A.K. Gill, J.L. Gillett-Kaufman, and B.A. Nault. 2015. Onion thrips   (Thysanoptera: Thripidae) biology, ecology, and management in onion production systems. J. Integ. Pest Mngmt. 6(1): 6. DOI: 10.1093/jipm/pmv006.

Gugino, B.K. and E.E. Pfeufer. 2015. Bacterial disease management of onion. 2015 Mid-Atlantic   Fruit and Vegetable Convention Proceedings, Pennsylvania Vegetable Growers Association, Richfield, PA. pp. 79-81.

Hoepting, C.A. 2015. New top performing pesticides now registered in onions in New York. March 1, 2015 Veg Edge, 11(3): 136-145.

Hoepting, C.A. 2015. Onion thrips breaking spray threshold in upland transplanted onion.  May 27, 2015, 2015 Veg Edge, 11(7): 9-10.

Hoepting, C.A. 2015. The conflicts of simultaneous control of onion thrips and Botrytis leaf blight in onions. June 17, 2015 Veg Edge, 11(10): 6-7.

Hoepting, C.A. 2015. Management of Summer Leaf Diseases in Onion: Target Spot Diseases. July 1, 2015, 2015 Veg Edge, 11(13): 6-7.

Hoepting, C.A. and B.A. Nault. 2015. Strategic Management of Onion Thrips in Onions. July 15, 2015, 2015 Veg Edge, 11(14): 4.

Hoepting, C.A. 2015. Causes of Outer and Inner Leaf Dieback in Onions. July 22, 2015, 2015 Veg Edge, 11(15): 5.

Hoepting, C.A. 2015. Scouting Tips for Identifying Downy Mildew in Onions. July 29, 2015, 2015 Veg Edge, 11(16): 5.

Hoepting, C.A. 2015. Managing Downy Mildew of Onion: Control of target Spot Diseases is Critical. August 5, 2015, 2015 Veg Edge, 11(17): 4-5.

Hoepting, C.A. 2015. Iris Yellow Spot Virus of Onion. August 12, 2015, 2015 Veg Edge, 11(18): 3.

Hoepting, C.A. 2015. Using Ridomil to Manage Downy Mildew in Onion. August 12, 2015,  2015 Veg Edge, 11(18): 6.

Hoepting, C.A. 2015. Managing Stemphylium leaf blight and downy mildew. Onion World,  31(7): 34-37.

Maughan, T., D. Drost and N. Allen. 2015. Vegetable Irrigation: Onion. Utah State University Cooperative Extension Bulletin. http://digitalcommons.usu.edu/extension_curall/723/

Nault, B.A. 2015. Onion thrips management: Crisis averted? What’s next?, 4 pgs. Empire State   Producers EXPO. January 22, 2015. Syracuse, NY.             http://www.hort.cornell.edu/expo/proceedings/2015/onions/Thrips%20management%20crises%20averted.pdf

Nault, B.A. 2015. Onion maggot and onion thrips management in onion. Onion World 31(2):   16-19.

Pappu, H.R. 2015. Thrips-transmitted Iris yellow spot virus – A threat to onion sustainability. Agricultural Research Journal 52: 10-12

Pfeufer, E., C. Hoepting, and B. Gugino. 2015. Advances in managing onion bacterial diseases in the Northeastern U.S. Onion World 31(6): 22-27.

Rinehold, J., Bell, N., Waters, T.D., & McGrath, D. 2015. Vegetable Insect Pests. In Craig Hollingsworth (Eds.), 2015 Pacific Northwest Insect Management Handbook Corvallis, OR: Oregon State University.

Sharma-Poudyal, D., Paulitz, T.C., and du Toit, L.J. 2015. Evaluation of onion genotypes for resistance to stunting caused by Rhizoctonia solani AG 8. HortScience 50:551-554.

Sharma-Poudyal, D., Paulitz, T.C., and du Toit, L.J. 2015. Stunted patches in onion bulb crops in Oregon and Washington: Etiology and yield loss. Plant Disease 99:648-658.

Sharma-Poudyal, D., Paulitz, T.C., and du Toit, L.J. 2016. Timing of glyphosate applications to wheat cover crops to reduce onion stunting caused by Rhizoctonia solani. Plant Disease 100: accepted Nov. 2015 pending minor revisions, revised & re-submitted Dec. 2015. PDIS-10-15-1234-RE

Shock, C.C., E.B.G. Feibert, A. Rivera, L.D. Saunders. 2015. Response of onion yield, grade, and financial return to plant population and irrigation system. HortScience 50(9):1312-1318.

Shock, C.C., J.M. Pinto, E.B.G. Feibert, and C.B. Shock. 2015. Optimal irrigation criteria for drip irrigated onions. Growing Produce. March 24, 2015.

Smith, E.A. 2016. Patters of dispersal activity of onion thrips, Thrips tabaci Lindeman, in onion ecosystems. Cornell University, PhD. Dissertation. Pp. 131.

Smith, E.A., M. Fuchs, E.J. Shields, and B.A. Nault. 2015. Long-distance dispersal potential for onion thrips (Thysanoptera: Thripidae) and Iris yellow spot virus (Bunyaviridae: Tospovirus) in an onion ecosystem. Environ. Entomol. 44(4): 921-930. DOI: 10.1093/ee/nvv072.

Vahling-Armstrong, C., Dung, J.K.S., Humann, J.L., and Schroeder, B. K. 2015. Effects of postharvest onion curing parameters on bulb rot caused by Pantoea agglomerans, Pantoea ananatis and Pantoea allii in storage. Plant Pathology, http://onlinelibrary.wiley.com/doi/10.1111/ppa.12438/epdf

Tripathi, D., G. Raikhy, and H.R. Pappu (2015). Movement and nucleocapsid proteins coded by two tospovirus species interact through multiple binding regions in mixed infections. Virology 478:143-53. doi: 10.1016/j.virol.2015.01.009

Tripathi, D., G. Raikhy, R. Dietzgen, M. Goodin, and H.R. Pappu (2015). In vivo Localization of Iris yellow spot virus (Bunyaviridae: Tospovirus)-encoded Proteins and Identification of Interacting Regions of Nucleocapsid and Movement Proteins. PLoS ONE 10(3): e0118973. doi:10.1371/journal.pone.0118973

Tripathi, D., and H.R. Pappu (2015). Evaluation of Acibenzolar-S-Methyl-Induced Resistance against Iris yellow spot tospovirus. European J. Plant Pathology 142:855–864. DOI 10.1007/s10658-015-0657-0 E.

Waters, T.D. and Skoczylas, J.C. 2015. Thrips Control in Dry Bulb Onions in Washington State, 2012. Arthropod Management Tests. Report #E70.

Waters, T.D. and Skoczylas, J.C. 2015. Thrips Control in Dry Bulb Onions in Washington State, 2014. Arthropod Management Tests. Report #E72.

Waters, T.D. and Skoczylas, J.C. 2015. Thrips Control on Dry Bulb Onions Using Overhead Chemigation of Insecticides, 2014. Arthropod Management Tests. Report #E71.

Wohleb, C.H. and Waters T.D. Yield, Quality, and Storage Characteristics of Onion Cultivars in the Columbia Basin of Washington. HortTech. Submitted.

Zaid, A.M., J.E. Asselin, and S.V. Beer. 2016. Detection of Burkholderia cepacia in onion planting materials and onion seeds. Chapter 22 in M. Fatmi and N. W. Schaad, eds. APS Manual on Detection of Plant Pathogenic Bacteria in Seed and Planting Material. 2nd Ed. APS Press. St. Paul, MN. (In Press).

02/21/2017

Peer-reviewed Articles

 

1. Anapalli, S.S., L.R. Ahuja, P.H. Gowda, L. Ma, G. Marek, S. Evett and T. Howell. Simulation of crop evapotranspiration and crop coefficient in weighing lysimeters. Agric. Water Manage. 177 (2016) 274–283. http://dx.doi.org/10.1016/j.agwat.2016.08.009. 2016.


2. Anderson, R.G., Alfieri, J.G., Tirado-Corbala, R., Gartung, J.L., Mckee, L.G., Prueger, J.H., Wang, D., Ayars, J.E., Kustas, W.P. 2016. Assessing FAO-56 dual crop coefficients using eddy covariance flux partitioning. Agricultural Water Management. 179:92-102. doi:10.1016/j.agwat.2016.07.027. Scudiero, T. H. Skaggs, D. L. Corwin. 2015. Regional-scale soil salinity assessment using Landsat ETM+ canopy reflectance. Remote Sensing of Environment 169: 335–343, doi:10.1016/j.rse.2015.08.026.


3. Armindo, R.A.2, and O. Wendroth. 2016. Physical Soil Structure Evaluation based on Hydraulic Energy Functions. Soil Sci. Soc. Am. J. 80:1167–1180, doi:10.2136/sssaj2016.03.0058


4. Arthur, E., M. Tuller, P. Moldrup, and L.W. De Jonge, 2016. Evaluation of Theoretical and Empirical Water Vapor Sorption Isotherm Models for Soils. Water Resour. Res., 52(1):190–205, doi:10.1002/2015WR017681


5. Baath G. S., M. K. Shukla, P. W. Bosland, R. L. Steiner, and S. J. Walker. 2017. Irrigation Water Salinity Influences at Various Growth Stages of Capsicum annuum. Ag Water Management. 179: 246-253.


6. Bohrer, S.L., R. Limb, A.L. Daigh, J.M. Volk, and A.F. Wick. 2016. Fine and coarse-scale patterns of vegetation diversity on reclaimed surface coal mineland over a 40-year chronosequence. Environ. Management. Accepted.


7. Bradford, S. A., and S. Torkzaban.  2015.  Determining parameters and mechanisms of colloid retention and release in porous media.  Langmuir.  31, 12096–12105.


8. Bradford, S. A., H. Kim, B. Headd, and S. Torkzaban.  2016.  Evaluating the transport of Bacillus subtilis spores as a potential surrogate for Cryptosporidium parvum oocysts.  Environmental Science & Technology, 50, 1295-1303.


9. Bradford, S.A., and R. Harvey. 2017. Future research needs involving pathogens in groundwater.  Hydrogeology Journal, In Press.


10. Brunetti, G. J. Šimůnek, and P.Piro, A comprehensive analysis of the variably-saturated hydraulic behavior of a green roof in Mediterranean climate, Vadose Zone Journal, 15(9), pp. 15, doi: 10.2136/vzj2016.04.0032, 2016a.


11. Brunetti, G., J. Šimůnek, and P. Piro, A comprehensive numerical analysis of the hydraulic behavior of a permeable pavement, Journal of Hydrology, 540, 1146-1161, doi: 10.1016/j.jhydrol.2016.07.030, 2016b.


12. Chahal, M. K., Z. Shi, and M. Flury, Nutrient leaching and copper speciation in compost-amended bioretention systems, Sci. Total Environ., 556, 302–309, 2016.


13. Chahal, M. K., J. B. Harsh, and M. Flury, Translocation of fluoranthene in porous media by advancing and receding air-water interfaces, Colloids Surf. Physicochem. Eng. Aspects, 492, 62–70, 2016.


14. Colaizzi, P.D., N. Agam, J.A. Tolk, S.R. Evett, T.A. Howell, Sr., S.A. O’Shaughnessy, P.H. Gowda, W.P. Kustas and M.C. Anderson. Advances in a two-source energy balance model: Partitioning of evaporation and transpiration for cotton. Trans. ASABE 59(1):181-197. DOI 10.13031/trans.59.11215. 2016.


15. Cosh M.H., T.E. Ochsner, L. McKee, J. Dong, J. Basara, S.R. Evett, C. Hatch, E. Small, S. Steele-Dunne, M. Zreda and C. Sayde. The Soil Moisture Active Passive Marena, Oklahoma, In Situ Sensor Testbed (SMAP-MOISST): Testbed Design and Evaluation of In Situ Sensors. Vadose Zone J. 15(4) doi:10.2136/vzj2015.09.0122. 2016.


16. Daehyun Kim, D.R. Hirmas, R.W. McEwan, T.G. Mueller, S.J. Park, P. Šamonil, J.A. Thompson, and O. Wendroth. 2016. Predicting the Influence of Multi-Scale Spatial Autocorrelation on Soil–Landform Modeling. Soil Sci. Soc. Am. J. 80:409-419, doi:10.2136/sssaj2015.10.0370.


17. Dafny, E., and J. Šimůnek, Infiltration in layered loess deposits: Revised numerical simulations and recharge assessment, Journal of Hydrology, 518, 339-354, doi:10.1016/j.jhydrol.2016.04.029, 2016.


18. Daigh, A.L.M. and A.W. Klaustermeier. 2016. Approaching brine spill remediation from the surface: A new in situ method. Agric. Environ. Letters. 1: doi:10.2134/ael2015.12.0013


19. De Jong van Lier, Q., and O. Wendroth. 2016. Reexamination of the field capacity concept in a Brazilian Oxisol. Soil Sci. Soc. Am. J. Soil Sci. Soc. Am. J. 80:264-274, doi:10.2136/sssaj2015.01.0035.


20. Deb, S. K., P. Sharma, M. K. Shukla, J. Ashigh, and J. Šimůnek, Numerical evaluation of nitrate distributions in the onion root zone under conventional furrow fertigation, Journal of Hydrologic Engineering, 21(2), 05015026-1-12, doi:10.1061/(ASCE)HE.1943-5584.0001304, 2016.


21. Dietzel, R., M.Z. Liebman, R.P. Ewing, M.J. Helmers, R. Horton, M. Jarchow, and S. Archontoulis. 2016. How efficiently do corn- and soybean-based cropping systems use water? A systems modeling analysis. Global Change Biology 22, 666–681, doi: 10.1111/gcb.131.


22. Doody, M.A., D.J. Wang, H. P. Bais, and Y. Jin. 2016. Differential antimicrobial activity of Silver nanoparticles to bacteria Bacillus subtilis and Escherichia coli, and toxicity to crop plant Zea mays and beneficial B. subtilis-Inoculated Z. mays. J. Nano Res. 18:290, DOI 10.1007/s11051-016-3602-z.


23. Engda, T.A., T.J. Kelleners, and G.B. Paige. 2016. Soil water monitoring and numerical flow modeling to quantify drought conditions in a rangeland ecosystem. Vadose Zone J. doi:10.2136/vzj2016.04.0036.


24. Engda, T.A., T.J. Kelleners, G.B. Paige, and A.L. Hild. 2016. Rainfall, evapotranspiration, and soil moisture as biomass predictors for Wyoming rangelands. Arid Land Research and Management 30: 445-459.


25. Engda, T.A. and T.J. Kelleners. 2016. Soil moisture-based drought monitoring at different time scales: A case study for the US Great Plains. Journal of the American Water Resources Association


26. Evett, S.R., T.A. Howell, Sr., A.D. Schneider, K.S. Copeland, D.A. Dusek, D.K. Brauer, J.A. Tolk, G.W. Marek, T.M. Marek and P.H. Gowda. The Bushland weighing lysimeters: A quarter century of crop ET investigations to advance sustainable irrigation. Trans. ASABE 58(5):163-197. DOI 10.13031/trans.58.11159. 2016.


27. Flores A., M.K. Shukla, D. Daniel, A. Ulery, B. Schutte, G. Pichionni and S. Fernald. 2016. Evapotranspiration Changes with Irrigation Using Saline Groundwater and RO Concentrate. J. Arid Environments. 131:35-45.


28. Flores A., M.K. Shukla, B. Schutte, G. Picchioni, and D. Daniel. 2017. Physiologic response of six plant species grown in two contrasting soils and irrigated with brackish groundwater and RO concentrate. Arid land Res. And Manag. Journal. (In Press).


29. Ghanbarian, B., C. Torres-Verdin, and T. H. Skaggs. 2016. Quantifying tight-gas sandstone permeability via critical path analysis. Adv. Water Resour. 92:316–322, doi:10.1016/j.advwatres.2016.04.015


30. Gonzalez, A., M.K. Shukla, J. Ashigh, and R. Purkins. 2016. Effect of application rate and irrigation on the movement and dissipation of indaziflam. J. Environmental Science. http://dx.doi.org/10.1016/j.jes.2016.09.002 (In Press)


31. Gonzalez A., M.K. Shukla, D. Dubois, J. Margez, J. Hernandez and E Olivas. 2016. Microbial and size characterization of airborne particulate matter collected on sticky tapes along US-Mexico border. J. Environmental Science. DOI:1016/j.jes.2015.10.037.


32. Guilin, S., Sun, Y., Cheng, Q., Wang, Z., Zhou, H., Wang, L., Xue, X., Chen, B., Jones, S. B., Schulze-Lammers, P., Berg, A., Damerow, L. (2016). Monitoring Tomato Root Zone Water Content Variation And Partitioning Evapotranspiration With A Novel Horizontally-Oriented Mobile Dielectric Sensor. Ag. Forest Meteorology.


33. Hall, S. J., Baker, M. A., Jones, S. B., Stark, J. M., Bowling, D. R. (2016). Contrasting soil nitrogen dynamics across a montane meadow and urban lawn in a semi-arid watershed. Urban Ecosystems. http://link.springer.com/article/10.1007/s11252-016-0538-0


34. Han, J., J. Shi, L. Zeng, J. Xu, and L. Wu. 2016. Impacts of continuous excessive fertilization on soil potential nitrification activity and nitrifying microbial community dynamics in greenhouse system, Journal of Soils and Sediments. DOI: 10.1007/s11368-016-1525-z.


35. Han, Y., G. Hwang, D. Kim, S. A. Bradford, B. Lee, I. Eom, P. J. Kim, S. Q. Choi, and H. Kim.  2016.  Transport, retention, and long-term release behavior of ZnO nanoparticle aggregates in saturated quartz sand coated: Role of solution pH and biofilm coating.  Water Research, 90, 247-257.


36. Hartge, K.H., R. Horn, R. Horton, J. Bachmann, and S. Peth. 2016. Essential Soil Physics: An introduction to soil processes, functions, structure and mechanics. Schweizerbart'sche Verlagsbuchhandlung, Germany.


37. Headd, B., and S. A. Bradford.  2016.  Use of aerobic spores as a surrogate for Cryptosporidium oocysts in surface water and groundwater.  Water Research, 90, 185-202.


38. Hlaváčiková, H., V. Novák, and J. Šimůnek, The effects of rock fragment shapes and positions on modeled hydraulic conductivities of stony soils, Geoderma, 281, 39-48, doi: 10.1016/j.geoderma.2016.06.034, 2016.


39. Li, X., J. Šimůnek, H. Shi, J. Yan, Z. Peng, and X. Gong, Spatial distribution of soil water, soil temperature, and plant roots in a drip-irrigated intercropping field with plastic mulch, European Journal of Agronomy, 83, 47-56, doi: 10.1016/j.eja.2016.10.015, 2017.


40. Horton, R. 2016. Set loving relationships as your highest priority. CSA News 61 (7), 31-32.


41. Huang, J., E. Scudiero, Michael Bagtang, Dennis L. Corwin, John Triantafilis, Monitoring scale-specific and temporal variation in electromagnetic conductivity images. Irrigation Sciences. 2016, 34:187-200.


42. Huang, J., E, Scudiero, Wes Clary, Dennis L. Corwin, John Triantafilis, Time-lapse monitoring of soil water content using electromagnetic conductivity imaging. Soil Use & Management. 2016, doi: 10.1111/sum.12261. (SPECIAL ISSUE PAPER)


43. Huang, J., E. Scudiero, H. Choo, Dennis L. Corwin, John Triantafilis, Mapping soil moisture across an irrigated field using electromagnetic conductivity imaging. Agricultural Water Management. 2016, 163:285-294.


44. Karandish, F. and J. Šimůnek, A field-modeling study for assessing temporal variations of soil-water-crop interactions under water-saving irrigation strategies, Agricultural Water Management, 178(12), 291-303, doi: 10.1016/j.agwat.2016.10.009, 2016a.


45. Karandish, F., and J. Šimůnek, A comparison of numerical and machine-learning modeling of soil water content with limited input data, Journal of Hydrology, 543, 892-909, doi: 10.1016/j.jhydrol. 2016.11.007, 2016b.


46. Karup, D., P. Modrup, M. Tuller, E. Arthur, and L.W. De Jonge, 2017. Prediction of the Soil Water Retention Curve for Structured Soil from Saturation to Oven-Dryness. Eur. J. Soil Sci., 68(1), doi:10.1111/ejss.12401.


47. Klaustermeier, A., H. Tomlinson, A.L. Daigh, R. Limb, T. DeSutter, and K. Sedivec. 2016. Comparison of soil-to-water suspension ratios for determining electrical conductivity of brine contaminated soils. Canadian J. Soil Sci. 96:233-243.


48. Kelleners, T.J., J. Koonce, R. Shillito, J. Dijkema, M. Berli, M.H. Young, J.M. Frank, and W.J. Massman. 2016. Numerical modeling of coupled water flow and heat transport in soil and snow. Soil Science Society of America Journal 80:247-263.


49. Kojima,Y., J.L. Heitman, G.N. Flerchinger, T. Ren, and R. Horton. 2016. Sensible heat balance estimates of transient soil ice contents. Vadose Zone J. doi:10.2136/vzj2015.10.0134.


50. Leij, F.J., S. A. Bradford, and A. Sciortino. 2016. Analytic solutions for colloid transport with time-and depth-dependent retention in porous media. Journal of Contaminant Hydrology, 195, 40–51.


51. Liang, Xi, Vasilis Liakos, Ole Wendroth, and George Vellidis. 2016. Using the Van Genuchten Model for Irrigation Scheduling. Agricultural Water Management 176:170-179.


52. Liu, G., M. Wen, R. Ren, B. Si, R. Horton, and K. Hu. 2016. A general in situ probe spacing correction method for dual probe heat pulse sensor. Agric. and Forest Meteorol. 226:50–56.


53. Levintal, E. M.I. Dragila, T. Kamai, N. Weisbrod (2017), Free and forced gas convection in highly permeable, dry porous media, Agricultural and Forest Metrology, 232, 469-478, Jan 15 2017


54. Lu, Y., X. Liu, J.L. Heitman, R. Horton, and T. Ren. 2016. Determining soil bulk density with thermo-time domain reflectometry: A thermal conductivity based approach. Soil Sci. Soc. Am. J. 80:48-54.


55. Man, J., W. Li, L. Zeng, and L. Wu. 2016. Data assimilation for unsaturated flow models with restart adaptive probabilistic collocation based Kalman filter, Advances in Water Resources. 92: 258-270.


56. Man, J., J. Zhang, W. Li, L. Zeng, and L. Wu. 2016. Sequential ensemble-based optimal design for parameter estimation, Water Resources Research. DOI: 10.1002/2016WR018736.


57. Mark, N., J. D. Arthur, K. Dontsova, M. Brusseau, S. Taylor, and J. Šimůnek, Column transport studies of 3-nitro-1,2,4-triazol-5-one (NTO) in soils, Chemosphere, doi: 10.1016/j.chemosphere.2016.12.067, 171, 427-434, 2017.


58. Marek, G.W., P.H. Gowda, T.H. Marek, B.W. Auvermann, S.R. Evett and D.K. Brauer. Estimating preseason irrigation losses by characterizing evaporation of effective precipitation under bare soil conditions using large weighing lysimeters. Agric. Water Manage. 169(May 2016):115–128. doi:10.1016/j.agwat.2016.02.024. 2016.


59. Marek, G., P. Gowda, S.R. Evett, R. Baumhardt, D. Brauer, T.A. Howell, T.H. Marek, R. Srinivasan. 2016. Calibration and validation of the SWAT model for predicting daily ET over irrigated crops in the Texas high plains using lysimetric data. Trans. ASABE 59(2):611-622. DOI.10.13031/trans.59.10926. 2016.


60. Naveed, M., Moldrup, P., Schaap, M.G., Tuller, M., Kulkarni, R., Vogel, H-J., and de Jonge, L.W., 2016. Prediction of biopore- and matrix-dominated flow from X-ray CT-derived macropore network characteristics. HESS, Vol. 20(10), p 4017-4030, DOI: 10.5194/hess-20-4017-2016.


61. O’Shaughnessy, S.A., S.R. Evett, A. Andrade, F. Workneh and C.M. Rush. Site-specific variable rate irrigation as a means to enhance water use efficiency. Trans. ASABE 59(1):239-249. DOI 10.13031/trans.59.11165. 2016.


62. Pelletier, M.G., R.C. Schwartz, G.A. Holt, J.D. Wanjura, and T.R. Green. Frequency domain probe design for high frequency sensing of soil moisture. Agriculture 6:60. doi:10.3390/agriculture6040060. 2016.


63. Schwartz, R.C., S.R. Evett, S. Anderson and D. Anderson. Evaluation of a direct-coupled TDR for determination of soil water content and bulk electrical conductivity. Vadose Zone J. 15(1)2016. doi: 10.2136/vzj2015.08.0115. 2016


64. Peng, H., T. Lei, Z. Jiang, and R. Horton. 2016. A method for estimating maximum static rainfall retention in pebble mulches used for soil moisture conservation. J Hydrol. 537:346–355.


65. Phogat, V., M. A. Skewes, J. W. Cox, and J. Šimůnek, Statistical assessment of a numerical model simulating agro hydro-chemical processes in soil under drip fertigated mandarin tree, Irrigation & Drainage System Engineering, 5(1), pp. 9, ISSN: 2168-9768, doi:10.4172/2168-9768.1000155, 2016.


66. Phogat, V., J. Šimůnek, M. A. Skewes, J. W. Cox, and M. G. McCarthy, Improving the estimation of evaporation by the FAO-56 dual crop coefficient approach under subsurface drip irrigation, Agricultural Water Management, 178(12), 189-200, doi: 10.1016/j.agwat.2016.09.022, 2016.


67. Phogat, V., M. A. Skewes, M. G. McCarthy, J. W. Cox, J. Šimůnek, and P. Petrie, Evaluation of crop coefficients, water productivity, and water balance components for wine grapes irrigated at different deficit levels by a sub-surface drip, Agricultural Water Management, 180, 22-34, doi: 10.1016/j.agwat.2016.10.016, 2017.


68. Poudyal, S., V.D. Zheljazkov, C.L. Cantrell, and T.J. Kelleners. 2016. Coal-bed methane water effects on Dill and its essential oils. Journal of Environmental Quality 45:728-733.


69. Prater, J.R., R. Horton, and M.L. Thompson. 2016. Impacts of environmental colloids on the transport of 17 β-estradiol in intact soil cores. Soil and Sediment Contamination: An International Journal, 25:2, 164-180, DOI:10.1080/15320383.2016.1112360.


70. Radcliffe, D., T. Knappenberger, and A. Daigh. 2016. Using Khan Academy videos in flipped classroom mode to bolster calculus skills in soil physics courses. Natural Sci. Education. 45: doi:10.4195/nse2016.04.0008


71. Raij, I., J. Šimůnek, A. Ben-Gal, and N. Lazarovitch, Water flow and multicomponent solute transport in drip irrigated lysimeters: Experiments and modeling, Water Resources Research, 52, 6557-6574, doi: 10.1002/2016WR018930, 2016.


72. Ren, R., G. Liu, M. Wen, R. Horton, B. Li, and B. Si. 2017. The effects of probe misalignment on sap flux density measurements and in situ probe spacing correction methods. Agricultural and Forest Meteorology 232, 176-185


73. Robinson, D. A., Jones, S. B., Lebron, I., Reinsch, S., Dominguez, M. T., Smith, A. R., Jones, D. L., Marshall, M. R., Emmett, B. (2016). Experimental Evidence for Drought Induced Alternative Stable States of Soil Moisture. Scientific Reports, 6, 20018.


74. Sadeghi, M., Ghahraman, B., Warrick, A., Tuller, M., Jones, S. B. 2016. A Critical Evaluation of the Miller and Miller Similar Media Theory for Application to Natural Soils. Water Resour. Res., 52(5), 3829–3846. http://onlinelibrary.wiley.com/doi/10.1002/2015WR017929/full


75. Sadeghi, M., A. Tabatabaeenejad, M. Tuller, M. Moghaddam, and S.B. Jones, 2017. Advancing NASA’s AirMOSS P-Band Radar Root Zone Soil Moisture Retrieval Algorithm via Incorporation of Richards’ Equation. Remote Sensing, 9(1), 17, doi:10.3390/rs9010017.


76. Sasidharan, S., S. Torkzaban, S. A. Bradford, P. G. Cook, and V. V. Gupta.  2017. Temperature dependency of virus and nanoparticle transport and retention in saturated porous media. J. Contamin. Hydrol., 196:10-20.


77. Sasidharan, S., S. Torkzaban, S. A. Bradford, R. Kookana, D. Page, and P. G. Cook.  2016.  Transport of bacteria and viruses in biochar-amended sand. Science of the Total Environment, 548-549, 100-109.


78. Schott, L.R., A. Lagzdins, A.L.M. Daigh, K. Craft, C. Pederson, G. Brenneman, and M.J. Helmers. 2016. Drainage water management effects over five years on water tables, drainage, and yields in southeast Iowa. J. Soil Water Conserv. Accepted.


79. Schutte B. J., N. Klypina and M. K. Shukla. 2016. Influence of Irrigation Timing on Disturbance-Induced Reductions in Soil Seedbank Density. Weed Science. 64:613-623.


80. Scudiero, E., D. L. Corwin, F. Morari, R. G. Anderson, and T. H. Skaggs. 2016. Spatial interpolation quality assessment for soil sensor transect datasets.  Computers and Electronics in Agriculture, 123:74–79.


81. Scudiero, E., D. L. Corwin, R. G. Anderson, T. H. Skaggs. 2016. Moving forward on remote sensing of soil salinity at regional scale. Frontiers in Environmental Science, 4:65, doi:10.3389/fenvs.2016.00065


82. Scudiero, E., Scott Lesch, Dennis L. Corwin, Validation of Sensor-Directed Spatial Simulated Annealing Soil Sampling Strategy. Journal of Environmental Quality. 2016, 45:1226-1233.


83. Scudiero, E., Dennis L. Corwin, Brian J. Weinhold, Bruce Bosley, John F. Shanahan, Cinthia K. Johnson, Downscaling Landsat 7 Canopy Reflectance Employing a Multi Soil Sensor Platform. Precision Agriculture. 2016, 17:55-73.


84. Scudiero, E., T. H. Skaggs, D. L. Corwin. 2016. Comparative regional-scale soil salinity assessment with near-ground apparent electrical conductivity and remote sensing canopy reflectance. Ecological Indicators. 70:276–284. http://dx.doi.org/10.1016/j.ecolind.2016.06.015


85. Sharma, P., M. K. Shukla, B. Stringam and D. VanLeeuwen. 2016. Alternate Approaches to Determine Spatial Dependence of Some Soil Properties. GSTF Journal on Agricultural Engineering. (in press)


86. Sharma P., M.K. Shukla, P. Bosland and R. Steiner. 2017. Soil moisture sensor calibration, actual evapotranspiration and crop coefficients for deficit irrigated greenhouse chile. Ag Wat Manag. 179: 81-91.


87. Sheng, W., Rumana, K., Sakai, M., Silfa, F., Jones, S. B. (2016). A Multi-Functional Penta-Needle Thermo-Dielectric Sensor for Porous Media Sensing. IEEE Sensors, 16(10), 3670-3678. ieeexplore.ieee.org/document/7400927/


88. Shuai, X., X. Li, R. Yost, and O. Wendroth. 2016. State-space estimation of the intrinsic soil Phosphorus pools from Mehlich-3 Test. Comm. Soil Sci. Plant Anal. 47:1058-1068, DOI: 10.1080/00103624.2016.1166244.


89. Šimůnek, J., M. Th. Van Genuchten, and M. Šejna, Recent developments and applications of the HYDRUS computer software packages, Vadose Zone Journal, 15(7), pp. 25, doi: 10.2136/vzj2016.04.0033, 2016.


90. Šimůnek, J., K. L. Bristow, S. A. Helalia, and A. A. Siyal, The effect of different fertigation strategies and furrow surface treatments on plant water and nitrogen use, Irrigation Science, 34(1), 53-69, doi:10.1007/s00271-015-0487-z, 2016.


91. Sintim, H. Y., and M. Flury, Is biodegradable plastic mulch the solution to agriculture’s plastic problem?, Environ. Sci. Technol., 50, (in press), 2016.


92. Slimene, E. B., L. Lassabatere, J. Šimůnek, T. Winiarski, and R. Gourdon, The role of heterogeneous lithology in a glaciofluvial deposit on unsaturated preferential flow – a numerical study, Journal of Hydrology and Hydromechanics, 65(??), ???-???, (in press).


93. Song, L. W.P. Kustas, S. Liu, P.D. Colaizzi, H. Nieto, Z. Xu, Y. Mae, M. Li, T. Xu, N. Agam, J.A. Tolk and S.R. Evett. Applications of a thermal-based two-source energy balance model using Priestley-Taylor approach for surface temperature partitioning under advective conditions. J. Hydrol. 540(2016):574–587. http://dx.doi.org/10.1016/j.jhydrol.2016.06.034. 2016


94. Thapa, R., A. Chatterjee, R. Awale, D. McGranahan, and A. Daigh. 2016. Meta-analysis on the effect of enhanced efficiency fertilizers on nitrous oxide emissions and crop yields in major cereal systems. Soil Sci. Soc. Am. J. 80:1121-1134.


95. Tian, Z., Y. Lu, R. Horton, and T. Ren.   A simplified de Vries-based model to estimate thermal conductivity of unfrozen and frozen soil. Europ. J. Soil Sci. 66:1-9.  doi: 10.1111/ejss.12366


96. Tolk, J.A., S.R. Evett, Wenwei Xu and R.C. Schwartz. Constraints on water use efficiency of drought tolerant maize grown in a semi-arid environment. Field Crops Res. 186:66–77. 2016.


97. Tong, B., Z. Gao, R. Horton, Y. Li, and L. Wang. 2016. An empirical model for estimating soil thermal conductivity from soil water content and porosity. Hydrometeor, 17, 601–613.


98. Tong, B., Z. Gao, R. Horton, and L. Wang. 2016. Soil apparent thermal diffusivity estimated by conduction and by conduction-convection heat transfer models. J. Hydrometeor. doi.org/10.1175/JHM-D-16-0086.1.


99. Torkzaban, S., and S. A. Bradford.  2016.  Critical role of surface roughness on colloid retention and release in porous media.  Water Research, 88, 274-284.


100. Vereecken, H., A. Schnepf, J. W. Hopmans, M. Javaux, D. Or, T. Roose, J. Vanderborght, M. Young, W. Amelung, M. Aitkenhead, S. D. Allisson, S. Assouline, P. Baveye, M. Berli, N. Bruggemann, P. Finke, M. Flury, T. Gaiser, G. Govers, T. Ghezzehei, P. Hallett, H. J. Hendricks Franssen, J. Heppel, R. Horn, J. A. Huisman, D. Jacques, F. Jonard, S. Kollet, F. Lafolie, K. Lamorski, D. Leitner, A. McBratney, B. Minasny, C. Montzka, W. Nowak, Y. Pachepsky, J. Padarian, N. Romano, K. Roth, Y. Rothfuss, E. C. Rowe, A. Schwen, J. Simunek, J. Van Dam, S. E. A. T. M. van der Zee, H. J. Vogel, J. A. Vrugt, T. Wohling, and I. M. Young, Modeling soil processes: Key challenges and new perspectives, Vadose Zone J., 15, doi:10.2136/vzj2015.09.0131, 2016.


101. Wang, Z., Y. Lu, Y. Kojima, S. Lu, M. Zhang, Y. Chen, and R. Horton. 2016. Tangent line/second-order bounded mean oscillation waveform analysis for short TDR probe. doi:10.2136/vzj2015.04.0054.  Vadose Zone J. 15:1-7.


102. Wang Dengjun, Shen Chongyang, Jin Yan, Su Chunming, Chu Lingyang, Zhou Dongmei. 2016. Role of Solution Chemistry in the Retention and Release of Graphene Oxide Nanomaterials in Uncoated and Iron Oxide-Coated Sand. Sci. of the Total Environ. 577, xx-xx. DOI: 10.1016/j.scitotenv.2016.11.029.


103. Wang, D.J., Y. Xie, D. P. Jaisi, Y. Jin. 2016. Effects of low-molecular-weight organic acids on the dissolution of hydroxyapatite Nanoparticles. Environ. Sci.: Nano. 3: 768-779, DOI: 10.1039/C6EN00085A.


104. Wang, Z., Y. Jin, C. Shen, T. Li, Y. Huang, B. Li. 2016. Spontaneous detachment of colloids from primary energy minima by Brownian diffusion. PLOS One, 11(1), doi.org/10.1371/journal.pone.0147368


105. Wang, Haizhen, Jun Lou, Haiping Gu, Xiaoyan Luo, Li Yang, Laosheng Wu, Yong Liu, Jianjun Wu, and Jianming Xu. 2016. Efficient biodegradation of phenanthrene by a novel strain Massilia sp. WF1 isolated from a PAH-contaminated soil. Environ Sci Pollut Res. 23:13378-13388.


106. Xiao, X., T.J. Sauer, J.W. Singer, R. Horton, J.L. Heitman, and T. Ren. Partitioning evaporation and transpiration in a maize field using heat pulse sensors for evaporation measurement. Transactions of the ASABE 59:591-599.


107. Xu, S., J. Qi, X.J. Chen, V. Lazouskaya, J. Zhuang, and Y. Jin. 2016. Coupled effect of extended DLVO and capillary interactions on the retention and transport of colloids through unsaturated porous media. Sci. of the Total Environ. 573: 564-572.


108. Yan, J., V. Lazouskaya, Y. Jin. 2016. Soil colloid release and stability affected by DOM under different redox conditions. Vadose Zone J. DOI:10.2136/vzj2015.02.0026


109. Yang, Y.1, O. Wendroth, and R.J. Walton. 2016. Temporal dynamics and stability of spatial soil matric potential in two land use systems. Vadose Zone J. 15, doi:10.2136/vzj2015.12.0157.


110. Yang, Ting, Quanjiu Wang, Laosheng Wu, Pengyu Zhang, Guangxu Zhao, Yanli Liu. A mathematical model for the transfer of soil solutes to runoff under water scouring. Science of the Total Environment. 2016, 569-570: 332-341.


111. Yang, Ting, Quanjiu Wang, Laosheng Wu, Guangxu Zhao, Yanli Liu, Pengyu Zhang. An Approximately Semi-Analytical Model for Describing Surface Runoff of Rainwater Over Sloped Land. Water Resources Management. 2016, 30: 1-14.


112. Yang, Ting, Quanjiu Wang, Laosheng Wu, Guangxu Zhao, Yanli Liu and Pengyu Zhang. A mathematical model for soil solute transfer into surface runoff as influenced by rainfall detachment. Science of the Total Environment. 2016, 557-558: 590-600.


113. Zeng, W., C. Xu, J. Huang, J. Wu, and M. Tuller, 2016. Predicting Near-Surface Moisture Content of Saline Soils from NIR Reflectance Spectra with a Modified Gaussian Model. Soil Sci. Soc. Am. J., 80, doi:10.2136/sssaj2016.06.0188.


114. Zhang, M. I. Engelhardt, J. Šimůnek, S.A. Bradford, D. Kasel, A.E. Berns, H. Vereecken, and E. Klumpp, Co-transport of chlordecone and sulfadiazine in the presence of functionalized multi-walled carbon nanotubes in soils, Environmental Pollution, doi: 10.1016/j.envpol.2016.12.018, 2016. (in press)


115. Zhang, J., W. Li, L. Zeng, and L. Wu. 2016. An adaptive Gaussian process-based method for efficient Bayesian experimental design in groundwater contaminant source identification problems, Water Resources Research. 52(8): 5971-5984.


116. Zhang, M, S. A. Bradford, J. Šimůnek, H. Vereecken, and E. Klumpp, Do goethite surfaces really control the transport and retention of multi-walled carbon nanotubes in chemically heterogeneous porous media? Environmental Science & Technology, 543, 892-909, doi: 10.1016/j.jhydrol. 2016.11.007, 2016.


117. Zhang, M., S.A. Bradford, J. Šimůnek, H. Vereecken, and E. Klumpp, Roles of cation valance and exchange on the retention and colloid-facilitated transport of functionalized multi-walled carbon nanotubes in a natural soil, Water Research, 109, 358-366, doi: 10.1016/j.watres.2016.11.062, 2017.


118. Zhang, Y.G, Schaap, M.G., Guadagnini, A. and Neuman S.P., 2016. Inverse modeling of unsaturated flow using clusters of soil texture and pedotransfer functions. WRR, Vol 52(10),p 7631-7644. DOI: 10.1002/2016WR019016.


119. Zhang, Y.G., Schaap, M.G., 2016 (accepted). Weighted Recalibration of the Rosetta Pedotransfer Model with Improved Estimates of Hydraulic Parameter Distributions and Summary Statistics (Rosetta3). To be published in 2017.


120. Zhang, X., H. Lei, L. Zhu, M. Qian, G. Yadavalli, J. Wu, S. Chen, From plastics to jet fuel range alkanes via combined catalytic conversions, Fuel 188, 28–38, 2016.


121. Zhang, X., H. Lei, L. Zhu, X. Zhu, M. Qian, G. Yadavalli, J. Wu, S. Chen, Thermal behavior and kinetic study for catalytic co-pyrolysis of biomass with plastics, Bioresources 220, 233–238, 2016.


122. Zhang, X., H. Lei, L. Zhu, M. Qian, X. Zhu, J. Wu, S. Chen, Enhancement of jet fuel range alkanes from co-feeding of lignocellulosic biomass with plastics via tandem catalytic conversions, Appl. Energ. 173, 418–430, 2016.


123. Zhang, X., H. Lei, J. Wu, S. Chen, Development of a catalytically green route to produce renewable cycloalkanes for jet fuels from diverse lignocellulosic biomasses and techno-economic analysis, Catal. Sci. Technol. 6, 4210–4220, 2016. doi: 10.1039/C5CY01623A.


124. Zhang, X., H. Lei, J. Wu, S. Chen, M. Chandoor, Catalytic co-pyrolysis of lignocellulosic biomass with polymers: A critical review, Green. Chem. 18, 4145–4169, 2016. doi: 10.1039/C6GC00911E


125. Zhang, X., H. Lei, L. Zhu, X. Zhu, M. Qian, G. Yadavalli, D. Yan, J. Wu, S. Chen, Optimizing carbon efficiency of jet fuel range alkanes from cellulose co-fed with polyethylene via catalytically combined processes, Bioresour. Technol. 214, 45–54, 2016. doi: 10.1016/j.biortech.2016.04.086.


126. Zhang, M., S. A. Bradford, J. Šimůnek, H. Vereecken, and E. Klumpp. 2016. Do goethite surfaces really control the transport and retention of multi-walled carbon nanotubes in chemically heterogeneous porous media?Environmental Science & Technology, 50, 12713-12721.


127. Zhang, M., S. A. Bradford, J. Šimůnek, H. Vereecken, and E. Klumpp.  2017.  Roles of cation valance and exchange on the retention and colloid-facilitated transport of functionalized multi-walled carbon nanotubes in a natural soil.  Water Research, 109, 358-366


128. Zhang, M., I. Engelhardt, J. Šimůnek, S. A. Bradford, D. Kasel, A. E. Berns, H. Vereecken, and E. Klumpp.  2017.  Co-transport of chlordecone and sulfadiazine in the presence of functionalized multi-walled carbon nanotubes in soils. Environ. Poll., 221:470-479.


129. Zhi, Y., P. Li, J. Shi, L. Zeng, and L. Wu. 2016. Source identification and apportionment of soil cadmium in cropland of Eastern China: a combined approach of models and geographic information system, Journal of Soils and Sediments. 16(2): 467–475.


130. Zhi, Y., T. Guo, J. Shi, L. Zeng, and L. Wu. 2016. Expressing lead isotopic compositions by fractional abundances for environmental source apportionment, Environmental Pollution. DOI: 10.1016/j.envpol.2016.07.024.


131. Zhu, Y., H. Lü, R. Horton, Z. Yu, and F. Ouyang. 2016. A modified soil moisture model for two-layer soil. Groundwater DOI: 10.1111/gwat.12387.

 

 

Theses/Dissertations:

1. Yan, J. 2016. Quantification and Characterization of Mobile Colloids: Their Potential Role in Carbon Cycling under Varying Redox Conditions. University of Delaware.


2. Klaustermeier, A. 2016. Brine-contaminated soils in western North Dakota: Site assessment methodology and a new in-situ remediation method. M.S. thesis North Dakota State Univ., Fargo.


3. Fenix, Ashley R. Field investigation of the variation of unsaturated flow under SDI and MESA irrigated cultivated fields. Submitted in Partial Fulfillment of the Requirements for the Degree Master of Science. Major Subject: Environmental Science. West Texas A&M University, Canyon, Texas, December 2016.

 

Patents

1. O’Shaughnessy, S.A., S.R. Evett, M.A. Hebel and P.D. Colaizzi. Multi-Band Photodiode Sensor. US Patent No. 9,451,745 B1. Issued Sept. 27, 2016.

 

 

Multimedia

Maps of annual and long-term average drainage rates across the state of Oklahoma available online at http://soilmoisture.okstate.edu/html/drainage-map.html.

02/04/2018

1. Abdu, Hiruy David A. Robinson, Janis Boettinger, Scott B. Jones. 2017. Electromagnetic induction mapping at varied soil moisture reveals field-scale soil textural patterns and gravel lenses. Agr. Sci. Eng. 4(2): 135-145, doi: 10.15302/J-FASE-201714

 

2. Aggarwal, P., R. Bhattacharyya, A. K. Mishra, T. K. Das, J. Šimůnek, P. Pramanik, S. Sudhishri, A. Vashisth, Krishnan, D. Chakraborty, and K. H. Kamble, Modelling soil water balance and root water uptake in cotton grown under different soil conservation practices in the Indo-Gangetic Plain, Agriculture, Ecosystems & Environment, 240, 287-299, doi: 10.1016/j.agee.2017.02.028, 2017.

 

3. Ajami, H., A. Sharma, L.E. Band, J.P. Evans, N. K. Tuteja, G.E. Amirthanathan, M.A. Bari. 2017. On the Non-stationarity of Hydrological Response in Anthropogenically Unaffected Catchments: An Australian Perspective, Hydrology and Earth System Sciences, doi:10.5194/hess-21-281-2017

 

4. Aller, D., K. Moore, R. Hintz. D. Laird, and R. Horton. 2017. Biochar age and crop rotation impacts on soil quality. Soil Sci. Soc. Am. J. 81:1157–1167. doi:10.2136/sssaj2017.01.0010.

 

5. Arthur, E., M. Tuller, P. Moldrup, M.H. Greve, M. Knadel, and L.W. DE Jonge, 2017. Applicability of the Guggenheim–Anderson–Boer water vapour sorption model for estimation of soil specific surface area. Eur. J. Soil Sci., 69(1), doi: doi: 10.1111/ejss.12524

 

6. Arthur, J. D., N. W. Mark, S. Taylor, J. Šimůnek, M. L. Brusseau, and K. M. Dontsova, Batch soil adsorption and column transport studies of 2,4-dinitroanisole (DNAN) in soils, Journal of Contaminant Hydrology, 199, 14-23, doi: 10.1016/j.jconhyd.2017.02.004, 2017.

 

7. Arthur, J. D., N. W. Mark, S. Taylor, J. Šimůnek, M. L. Brusseau, and K. M. Dontsova, Dissolution and transport of insensitive munitions formulations IMX-101 and IMX-104 in saturated soil columns, Science of Total Environment, (in press).

 

8. Baath G. S., M. K. Shukla, P. W. Bosland, R. L. Steiner, and S. J. Walker. 2017. Irrigation Water Salinity Influences at Various Growth Stages of Capsicum annuum. Ag Water Management. 179: 246-253.

 

9. Baram, S., V. Couvreur, T. Harter, M. Read, P.H. Brown, M. Kandelous, D.R. Smart, and J.W. Hopmans, 2016. Estimating Nitrate Leaching to Groundwater from Orchards: Comparing Crop Nitrogen Excess, Deep Vadose Zone Data-Driven Estimates, and HYDRUS Modeling. Vadose Zone J. 15. doi:10.2136/vzj2016.07.0061.

 

10. Baram S., V. Couvreur, T. Harter, M. Read, P.H. Brown, J.W. Hopmans, D.R. Smart, 2016. Assessment of orchard N losses to groundwater with a vadose zone monitoring network. Agricultural Water Management 172:83-95. doi:10.1016/j.agwat.2016.04.012

 

11. Brunetti, G., J. Šimůnek, M. Turco, and P. Piro, On the use of surrogate-based modeling for the numerical analysis of Low Impact Development techniques, Journal of Hydrology, 548, 263-277, doi: 1016/j.jhydrol.2017.03.013, 2017.

 

12. Brunetti, G., H. Saito, T. Saito, and J. Šimůnek, A computationally efficient pseudo-3D model for the numerical analysis of borehole heat exchangers, Applied Energy, 208, 113-1127, doi.: 10.1016/j.apenergy.2017.09.042, 2017 (IF=7.18).

 

13. Caruso P., C. Ochoa, T. Deboodt and T. Jarvis. 2017. Influence of hydrogeology on groundwater dependent ecosystems. OSU-Research Progress Report. 16 pp.

 

14. Chen, Z., W. Zhang, G. Wang, Y. Zhang, Y. Gao, S.A. Boyd, B.J. Teppen, J.M. Tiedje, D. Zhu, and H. Li. 2017. Bioavailability of soil-sorbed tetracycline to Escherichia coli under unsaturated conditions. Environmental Science & Technology, 51(11), 6165-6173.

 

15. Darzi-Naftchali, A., F. Karandish, and J. Šimůnek, Numerical modeling of soil water dynamics in subsurface drained paddies with midseason drainage or alternate wetting and drying management, Agricultural Water Management, 197, 67-78, doi: 10.1016/j.agwat.2017.11.017,

 

16. Diamantopoulos, E., J. Šimůnek, C. Oberdörster, K. Hammel, B. Jene, T. Schröder, and T. Harter, Assessing the potential risk of groundwater to pesticides – a model comparison, Vadose Zone Journal, 16(11), pp. 13, doi: 2136/vzj2017.04.0070, 2017.

 

17. Diamantopoulos, E., J. Simunek, C. Oberdoerster, K. Hammel,B. Jene, T. Schroeder, and T. Harter, 2017. Asessing the potential exposure of groundwater to pesticides: A model comparison. Vadose Zone J. 16(11), 13 pages, doi:10.2136/vzj2017.04.0070.

 

18. Diamantopoulos, E., W. Durner, T. Harter, Prediction of capillary air-liquid interfacial area vs. saturation function from relationship between capillary pressure and water saturation, Advances in Water Resources, Volume 97, November 2016, Pages 219-223, ISSN 0309-1708, doi:10.1016/j.advwatres.2016.09.012.

 

19. Dijkema, J., J.E. Koonce, R.M. Shillito, T.A. Ghezzehei, M. Berli, M. van der Ploeg, et al. 2017. Water Distribution in an Arid Zone Soil: Numerical analysis of data from a large weighing lysimeter. Vadose Zone Journal. doi:10.2136/vzj2017.01.0035.

 

20. Dokoohaki, H., F.E. Miguez, D. Laird, R. Horton, and A.S. Basso. 2017. Assessing the biochar effects on selected physical properties of a sandy soil: an analytical approach, Communications in Soil Science and Plant Analysis, DOI:10.1080/00103624.2017.1358742.

 

21. Dörner, J., R. Horn, D. Dec, O. Wendroth, H. Fleige, and F. Zunigaugalde. 2017. Land-use-dependent change in the soil mechanical strength and resilience of a shallow volcanic ash soil in southern Chile. Soil Sci. Soc. Am. J. 81:1064-1073.


22. Durfee, N. and C. Ochoa. 2017. Stream temperature dynamics in a semiarid riparian system in northcentral Oregon. 2017. OSU-Research Progress Report. 14 pp.

 

23. Edwards, E. C., Harter, T., Fogg, G. E., Washburn, B., & Hamad, H. (2016). Assessing the Effectiveness of Drywells as Tools for Stormwater Management and Aquifer Recharge and Their Groundwater Contamination Potential. Journal of Hydrology 539:539-553, doi:10.1016/j.jhydrol.2016.05.059.

 

24. Flores A., M.K. Shukla, B. Schutte, G. Picchioni, and D. Daniel. 2017. Physiologic response of six plant species grown in two contrasting soils and irrigated with brackish groundwater and RO concentrate. Arid land Res. and Manag. Journal. 31:182-203.

 

25. Flury, M., and S. Aramrak, Role of air-water interfaces in colloid transport in porous media: A review, Water Resour. Res., 53, 5247–5275, 2017. (dx.doi.org/10.1002/2017WR020597)


26. Gao, Y., X. Hu, Z. Zhou, W. Zhang, Y. Wang, and B. Sun. 2017. Phytoavailability and mechanism of bound PAH residues in filed contaminated soils. Environmental Pollution, 222, 465-476.

 

27. Gao, Z., Tong, B., Horton, R., Mamtimin, A., Li, Y., & Wang, L. 2017. Determination of desert soil apparent thermal diffusivity using a conduction-convection algorithm. J. Geophysical Research: Atmospheres, 122. 9569–9578, doi.org/10.1002/2017JD027290.

 

28. Garcia-Serrana, M., J.S. Gulliver and J.L. Nieber, 2017. Non-uniform overland flow-infiltration model for roadside swales, J. Hydrol., 552: 586–599.

 

29. Garcia-Serrana, M., J.S. Gulliver and J.L. Nieber, 2017. Infiltration capacity of roadside filter strips with non-uniform overland flow, J. Hydrol., 545: 451–462.

 

30. Garcia-Serrana, M., J.L. Nieber and J.S. Gulliver, 2017. Infiltration flux for parallel strip water sources, Vadose Zone J., doi:10.2136/vzj2017.07.0137.

 

31. Gemitzi, A., H. Ajami, H. Richnow. 2017. Developing Empirical Monthly Groundwater Recharge Equations based on Modeling and Remote Sensing Data - Modeling Future Groundwater Recharge to Predict Potential Climate Change Impacts, Journal of Hydrology, http://dx.doi.org/10.1016/j.jhydrol.2017.01.005

 

32. Gohardoust, M.R., M. Sadeghi, M. Ziatabar Ahmadi, S.B. Jones, and M. Tuller, 2017. Hydraulic Conductivity of Stratified Unsaturated Soils: Effects of Random Variability and Layering. Journal of Hydrology, 546:81–89, doi: 10.1016/j.jhydrol.2016.12.055.

 

33. Gonzalez, A., M.K. Shukla, and B. Schutte. 2017. Effect of Indaziflam application and soil manipulations on Pecan evapotranspiration and gas exchange parameters. Hort Science. 52:910-915. doi: 10.21273/HORTSCI11905-17.

 

34. Gonzalez, A., M.K. Shukla, J. Ashigh, and R. Purkins. 2017. Effect of application rate and irrigation on the movement and dissipation of indaziflam. J. Environmental Science. http://dx.doi.org/10.1016/j.jes.2016.09.002. 52:910-915.

 

35. Gonzalez A., M.K. Shukla, D. Dubois, J. Margez, J. Hernandez and E Olivas. 2017. Microbial and size characterization of airborne particulate matter collected on sticky tapes along US-Mexico border. J. Environmental Science. DOI:1016/j.jes.2015.10.037. 53: 207-216.

 

36. Gu, H., Yuanzhi Chen, Xingmei Liu, Haizhen Wang*, Jue Shen-Tu, Laosheng Wu, Lingzao Zeng, Jianming Xu. The effective migration of Massilia sp. WF1 by Phanerochaete chrysosporium and its phenanthrene biodegradation in soil. Science of the Total Environment, 2017, 593-594: 695-703. (IF2016=4.9)

 

37. Gutierrez-Jurado K., A.G. Fernald, S.J., Guldan, and C.G. Ochoa. 2017. Surface water and groundwater interactions in traditionally-irrigated fields in northern New Mexico, U.S.A. Water, 9(102): 1–14.

 

38. Hafner, S. C., N. Watanabe, Harter, B. A. Bergamaschi, S. J. Parikh, 2016. Effects of solid-liquid separation and storage on monensin attenuation in dairy waste management systems, Journal of Environmental Management, Volume 190, 1 April 2017, Pages 28-34, ISSN 0301-4797, doi:10.1016/j.jenvman.2016.12.024.

 

39. Hafner, S.C., T. Harter, and S.J. Parikh, 2016. Evaluation of monensin transport to shallow groundwater after irrigation with dairy lagoon water. J. Env. Qual. 45(2):480-487. doi:10.2134/jeq2015.05.0251

 

40. Hamidisepehr1, A., M.P. Sama, A.P. Turner, and O.O. Wendroth. 2017. A method for reflectance index wavelength selection from moisture-controlled soil and crop residue samples. ASABE 60:1479-1487

 

41. Han, J., Jiachun Shi, Lingzao Zeng, Jianming Xu, Laosheng Wu. Impacts of continuous excessive fertilization on soil potential nitrification activity and nitrifying microbial community dynamics in greenhouse system, Journal of Soils and Sediments, 2017, 17(2): 471-480. ( DOI 10.1007/s11368-016-1525-z)

 

42. Hartmann, A., J. Šimůnek, K. Aidoo, S. J. Seidel, and N. Lazarovitch, Modeling root growth as a function of different environmental stresses using HYDRUS, Vadose Zone Journal, pp. 16, doi: 10.2136/vzj2017.02.0040, (in press).

 

43. Hayes, D. G., L. C. Wadsworth, H. Y. Sintim, M. Flury, M. English, S. Schaeffer, and A. M. Saxton, Effect of diverse weathering conditions on the physicochemical properties of biodegradable plastic mulches, Polymer Testing, 62, 454–467, 2017. (dx.doi.org/10.1016/j.polymertesting.2017.07.027)

 

 

44. He, H., M.F. Dyck, R. Horton, M. Li, H. Jin, and B. Si. 2017. Distributed temperature sensing for soil physical measurements and its similarity to heat pulse method. Advances in Agronomy (in press), doi.org/10.1016/bs.agron.2017.11.003.

 

45. Heitman, J.L., X. Zhang, X. Xiao, T. Ren, and R. Horton. 2017. Advances in heat-pulse methods: measuring soil water evaporation with sensible heat balance. Methods of Soil Analysis Vol. 2, doi:10.2136/msa2015.0029.

 

46. Jacques, D., J. Šimůnek, D. Mallants, and M. Th. van Genuchten, The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications, Journal of Hydrology and Hydromechanics, 66(2), doi: 10.1515/johh-2017-0049, (in press).

 

47. Jones, A.S., Z.T. Aanderud, J.S. Horsburgh, D. Eiriksson, D. Dastrup, C. Cox, S.B. Jones, D. Bowling, J. Carlisle, G. Carling, M.A. Baker. 2017. Designing and Implementing a Network for Sensing Water Quality and Hydrology across Mountain to Urban Transitions. Journal of the American Water Resources Association (JAWRA) 53(5):1095–1120. https://doi.org/10.1111/1752-1688.12557

 

48. Jun Man, Qinzhuo Liao, Lingzao Zeng, Laosheng Wu. ANOVA-based transformed probabilistic collocation method for Bayesian data-worth analysis. Advances in Water Resources. (2017). 110: 203-214.

 

49. Kacimov, A., Y. Obnosov, and J. Šimůnek, Steady flow from an array of subsurface emitters: Kornev’s irrigation technology and Kidder’s free boundary problems revisited, Transport in Porous Media, doi: 10.1007/s11242-017-0978-x, (in press).

 

50. Karandish, F., A. Darzi-Naftchali, and J. Šimůnek, Application of HYDRUS (2D/3D) for predicting the influence of subsurface drainage on soil water dynamics in a rainfed-canola cropping system, Irrigation and Drainage Journal, 11 p., doi: 10.1002/ird.2194, (in press).

 

51. Karandish, F., and J. Šimůnek, Two-dimensional modeling of nitrogen and water dynamics under various N-managed water saving irrigation strategies using HYDRUS, Agricultural Water Management, 193, 174-190, doi: 10.1016/j.agwat.2017.07.023, 2017.

 

52. Karimov, K., M. A. Hanjra, J. Šimůnek, and M. Avliyakulov, Can a change in cropping pattern produce water savings and social gains: A case study from the Fergana Valley, Central Asia, Journal of Hydrology and Hydromechanics, 66(2), doi: 10.1515/johh-2017-0054, (in press).

 

53. Karup, D., P. Moldrup, M. Tuller, E. Arthur, and L.W. DE Jonge, 2017. Prediction of the Soil Water Retention Curve for Structured Soil from Saturation to Oven-Dryness. Eur. J. Soil Sci., 68(1), doi: 10.1111/ejss.12401.

 

54. Kreba1, S.A., O. Wendroth, M.S. Coyne, and R.J. Walton. 2017. Soil Gas Diffusivity, Air-filled Porosity, and Pore Continuity: Land Use and Spatial Patterns. Soil Sci. Soc. Am. J. 81:477-489.

 

55. Krider, L., J. Magner, B. Hansen, G. Kramer, B. Wilson, J. Peterson and J.L. Nieber, 2017. Improvements in fluvial stability associated with two-stage ditch construction in Mower County, Minnesota, J. Amer. Water Resour. Assoc., DOI: 10.1111/1752-1688.12541.

 

56. Lamorski, K., J. Šimůnek, C. Sławiński, and J. Lamorska, An estimation of the main wetting branch of soil water retention curve based on its main drying branch using the machine learning method, Water Resources Research, 53, pp. 14, doi: 10.1002/2016WR019533, 2017.

 

57. Lawrinenko, M., Z. Wang, R. Horton, D. Mendivelso-Perez, E.A. Smith, T.E. Webster, D.A. Laird, and J. van Leeuwen. 2017. Macroporous carbon supported zerovalent iron for remediation of trichloroethylene. DOI: 10.1021/acssuschemeng.6b02375. ACS Sustainable Chem. Eng. 5:1586−1593.

 

58. Lazarovitch, N., J. Vanderborght, Y. Jin, and M. Th. Van Genuchten. 2018. The root zone: Soil physics and beyond. Vadose Zone J. (in press)

 

59. Li, T. T., Y. Jin, Y. F. Huang, B.G. Li, and C.Y. Sheng*. 2017. Observed dependence of colloid detachment on the concentration of initially attached colloids and collector surface heterogeneity in porous media. Sci.  Technol. 51, 2811−282, DOI:10.1021/acs.est.6b06264.

 

60. Li, W. and J.L. Nieber, 2017. A modified simple dynamical model: derived from the information manifested in streamflow observation. J. Hydrol., 552: 198–209.

 

61. Li, X., J. Šimůnek, Shi, J. Yan, Z. Peng, and X. Gong, Spatial distribution of soil water, soil temperature, and plant roots in a drip-irrigated intercropping field with plastic mulch, European Journal of Agronomy, 83, 47-56, doi: 10.1016/j.eja.2016.10.015, 2017a.

 

62. Li, Y., J. Šimůnek, S. Wang, J. Yuan, and W. Zhang, Modeling of soil water regime and water balance in a transplanted rice field experiment with reduced irrigation, Water, 9(4), 248, 14 pp, doi: 10.3390/w9040248,

 

63. Li, Y., J. Šimůnek, S. Wang, W. Zhang, and J. Yuan, Simulating the effects of lake wind waves on water and solute exchange across the lakeshore using Hydrus-2D, Water, 9(8), 566, 18 pp., doi: 10.3390/w9080566, 2017c.

 

64. Liang, J., S. A. Bradford, J. Šimůnek, A. Hartmann, Adapting HYDRUS-1D to simulate overland flow and reactive transport during sheet flow deviations, Vadose Zone Journal, 16(6), pp. 18, doi: 10.2136/vzj2016.11.0113, 2017.

 

65. Liu, G., Y. Lu, M. Wen, T. Ren, and R. Horton. 2017. Advances in the heat-pulse technique: improvements in measuring soil thermal properties. Methods of Soil Analysis Vol. 2, doi:10.2136/msa2015.0028.

 

66. Lu, Y., X. Liu, M. Zhang, J. Heitman, R. Horton, and T. Ren. 2017. Thermo–time domain reflectometry method: advances in monitoring in situ soil bulk density. Methods of Soil Analysis Vol. 2, doi:10.2136/msa2015.0031.

 

67. Ludington, W.B., T.D. Seher, O. Applegate, X. Li, J.I. Kliegman, C. Langelier, E.R. Atwill, T. Harter, and J.L. DeRisi, 2017. Assessing biosynthetic potential of agricultural groundwater through metagenomic sequencing: A diverse anammox community dominates nitrate-rich groundwater. PloS one, 12(4), p.e0174930 (open access).

 

68. Luo, C., Z. Wang, T.J. Sauer, M.J. Helmers, and R. Horton. 2018. Portable canopy chamber measurements of evapotranspiration in corn, soybean, and reconstructed prairie. Agricultural Water Management 198:1–9, doi.org/10.1016/j.agwat.2017.11.024.

 

69. Ma, D., J. Zhang, R. Horton, Q. Wang, and J. Lai. 2017. Analytical method to determine soil hydraulic properties from vertical infiltration experiments. Soil Sci. Soc. Am. J. doi:10.2136/sssaj2017.02.0061.

 

70. Mallants, D., J. Šimůnek, and D. Torkzaban, Determining water quality requirements of coal seam gas produced water for sustainable irrigation, Agricultural Water Management, 189, 52-69, doi: 10.1016/j.agwat.2017.04.011, 2017a.

 

71. Mallants, D., J. Šimůnek, M. Th. van Genuchten, and D. Jacques, Simulating the fate and transport of coal seam gas chemicals in variably-saturated soils using HYDRUS, Special Issue “Water and Solute Transport in Vadose Zone”, Water, 9, 385, 34 pp., doi: 10.3390/w9060385, 2017b.

 

72. Mallmann, F. J. K., D. R. dos Santos, M. A. Bender, E. Gubiani, M. da Veiga, J. P. G. Minella, F. van Oort, and J. Šimůnek, Modeling zinc and copper movement in an Oxisol contaminated by long-term pig slurry amendments, Vadose Zone Journal, Special issue "Soil Variability and Biogeochemical Fluxes", 16(10), pp. 14, doi: 10.2136/vzj2017.01.0011, 2017.

 

73. Mark, N. W., J. D. Arthur, K. M. Dontsova, M. L. Brusseau, S. Taylor, and J. Šimůnek, Column transport studies of 3-nitro-1,2,4-triazol-5-one (NTO) in soils, Chemosphere, 171, 427-434, doi: 10.1016/j.chemosphere.2016.12.067, 2017.

 

74. Niraula, R., T. Meixner, F. Dominguez, N. Bhattarai, M. Rodell, H. Ajami, D. Gochis, C. Castro. 2017. How Might Recharge Change Under Projected Climate Change in the Western US?, Geophysical Research Letters, doi:10.1002/2017GL075421

 

75. Niraula, R., T, Meixner, H. Ajami, M. Rodell, D. Gochis, C.L. Castro. 2017. Comparing Potential Recharge Estimates from Three Land Surface Models across the Western US, Journal of Hydrology,

 

76. Paradis, A., C. Brueck, D. Meisenheimer, T. Wanzek, and M.I. Dragila. 2017. Sandy Soil Microaggregates: Rethinking Our Understanding of Hydraulic Function, Vadose Zone Journal, 16(9), DOI: 10.2136/vzj2017.05.0090

 

77. Parajuli, K., M. Sadeghi and S.B. Jones. 2017. A Binary Mixing Model for Characterizing Stony-Soil Water Retention. Agricultural and Forest Meteorology, Volumes 244–245:1-8.

 

78. Peng, X., J. Heitman, R. Horton, and T. Ren. 2017. Determining near-surface soil heat flux density using the gradient method: a thermal conductivity model–based approach. J. Hydrometeorology 18:2285-2295, DOI: 10.1175/JHM-D-16-0290.1.

 

79. Peng, X., Y. Wang, J. Heitman, T. Ochsner, R. Horton, and T. Ren. 2017. Measurement of soil-surface heat flux with a multi-needle heat-pulse probe. European Journal of Soil Science 68:336–344, doi: 10.1111/ejss.12421.


80. Phogat, V., M. A. Skewes, M. G. McCarthy, J. W. Cox, J. Šimůnek, and P. Petrie, Evaluation of crop coefficients, water productivity, and water balance components for wine grapes irrigated at different deficit levels by a sub-surface drip, Agricultural Water Management, 180, 22-34, doi: 10.1016/j.agwat.2016.10.016, 2017a.

 

81. Phogat, V., N. J. Potter, J.W. Cox, and J. Šimůnek, Long-term quantification of stream-aquifer exchange in a variably saturated heterogeneous environment, Water Resources Management, 31(13), 4353-4366, doi: 1007/s11269-017-1752-0, 2017b.

 

82. Pinon-Villarreal, A., A. Bawazir, M.K. Shukla, A. Samani, and J.P. King. 2017. Modeling capillary rise in Clinoptilolite zeolite and riparian soils to sustain vegetation in water scarce areas. J. Irrigation and Drainage ASCE. 143 (11): DOI: 10.1061/(ASCE)IR.1943-4774.0001235.

 

83. Pleasants, M.S., T.J. Kelleners, and N. Ohara. 2017. Analysis of snowpack dynamics during the spring melt season using point measurements and numerical modeling. Hydrological     Processes 31:4568-4585.

 

84. Qin, C., F. Kang, W. Zhang, W. Shou, and Y. Gao. 2017. Environmentally-relevant concentrations of Al(III) and Fe(III) cations induce aggregation of free DNA by complexation with phosphate group. Water Research, 123, 58-66.

 

85. Ransom, K.M., B.T. Nolan, J.A. Traum, C.C. Faunt, A.M. Bell, J.M. Gronberg, D.C. Wheeler, C.Z. Rosecrans, B.Jurgens, G.E. Schwarz, K. Belitz, S.M. Eberts, G. Kourakos, and T. Harter, 2017. A hybrid machine learning model to predict and visualize nitrate concentration throughout the Central Valley aquifer, California, USA, Science of The Total Environment, Volumes 601–602 (1), p. 1160-1172, doi:10.1016/j.scitotenv.2017.05.192 (open access).

 

86. Ransom, K. M., M. N. Grote, A. Deinhart, G. Eppich, C. Kendall, M. E. Sanborn, A. K. Souders, J. Wimpenny, Q.-Z. Yin, M. Young, and T. Harter, 2016. Bayesian nitrate source apportionment to individual groundwater wells in the Central Valley by use of elemental and isotopic tracers, Water Resour. Res., 52, 5577–5597, doi:10.1002/2015WR018523 (open access).

 

87. Ren, R., G. Liu, M. Wen, R. Horton, B. Li, and B. Si. 2017. The effects of probe misalignment on sap flux density measurements and in situ probe spacing correction methods. Agricultural and Forest Meteorology 232, 176-185.

 

88. Sadeghi, M., W. Sheng, E. Babaeian, M. Tuller, and S.B. Jones, 2017. High Resolution Shortwave Infrared Imaging of Water Infiltration into Dry Soil. Vadose Zone Journal, doi: 10.2136/vzj2016.11.0112.

 

89. Sadeghi, M., E. Babaeian, M. Tuller, and S.B. Jones, 2017. The Optical Trapezoid Model: A Novel Approach to Remote Sensing of Soil Moisture Applied to Sentinel-2 and Landsat-8 Observations. Remote Sens Environ., 198:52-68, doi: 10.1016/j.rse.2017.05.041.


90. Sadeghi, M., A. Tabatabeiinejad, M. Tuller, M. Moghaddam, and S.B. Jones, 2017. Advancing NASA’s AirMOSS P-Band Radar Root Zone Soil Moisture Retrieval Algorithm via Incorporation of Richards’ Equation. Remote Sensing, 9(1), 17, doi:10.3390/rs9010017.

 

91. Saglam, M., H. Y. Sintim, A. I. Bary, C. A. Miles, S. Ghimire, D. A. Inglis, and M. Flury, Modeling the effect of biodegradable paper and plastic mulch on soil moisture dynamics, Agric. Water Manage., 193, 240–250, 2017. (dx.doi.org/10.1016/j.agwat.2017.08.011)

 

92. Sasidharan, S., A. Bradford, J. Šimůnek, S. Torkzaban, and J. Vanderzalm, Transport and fate of viruses under managed aquifer recharge conditions in a carbonate aquifer, Journal of Hydrology, 555, 724-735, doi: 10.1016/j.jhydrol.2017.10.062, 2017.

 

93. Sharma P., M.K. Shukla, P. Bosland and R. Steiner. 2017. Soil moisture sensor calibration, actual evapotranspiration and crop coefficients for deficit irrigated greenhouse chile. Ag Wat Manag. 179: 81-91.

 

94. Sheng, W., R. Zhou, M. Sadeghi, D.A. Robinson, M. Tuller, and S.B. Jones, 2017. A TDR Array Probe for Monitoring Near-surface Soil Moisture Distribution. Vadose Zone Journal, doi: 10.2136/vzj2016.11.0112.

 

95. Shelia, V., Šimůnek, K. Boote, and G. Hoogenbooom, Coupled DSSAT and HYDRUS-1D for simulations of soil water dynamics in the soil-plant-atmosphere system, Journal of Hydrology and Hydromechanics, 66(2), doi: 10.1515/johh-2017-0055, (in press).

 

96. Šimůnek, J., M. Šejna, and M. Th. van Genuchten, New Features of the Version 3 of the HYDRUS (2D/3D) Computer Software Package, Journal of Hydrology and Hydromechanics, 66(2), doi: 10.1515/johh-2017-0050, (in press).

 

97. Šimůnek, J., Th. van Genuchten, and R. Kodešová, Thematic issue on HYDRUS applications to subsurface flow and contaminant transport problems, Journal of Hydrology and Hydromechanics, 66(2), 129-132, doi: 10.1515/johh-2017-0060, (in press).

 

98. Slimene, E. B., L. Lassabatere, Šimůnek, T. Winiarski, and R. Gourdon, The role of heterogeneous lithology in a glaciofluvial deposit on unsaturated preferential flow – a numerical study, Journal of Hydrology and Hydromechanics, 65(3), 209-221, doi: 10.1515/johh-2017-0004, 2017.

 

99. Sintim, H. Y., and M. Flury, Is biodegradable plastic mulch the solution to agriculture’s plastic problem?, Environ. Sci. Technol., 51, 1068–1069, 2017. (dx.doi.org/10.1021/acs.est.6b06042)

 

 100.Srivastava, A., J. Q. Wu, W. J. Elliot, E. S. Brooks, and D. C. Flanagan, Modeling streamflow in a snow-dominated forest watershed using the Water Erosion Prediction Project (WEPP) model, Trans. ASABE, 60, 1171-1187, 2017.

 

101. Sun, W., M. Li, W. Zhang, J. Wei, B. Chen, and C. Wang. 2017. Sediments inhibit adsorption of 17?-estradiol and 17?-ethinylestradiol to carbon nanotubes and graphene oxide. Environmental Science: Nano, 4, 1900-1910.

 

102. Sun, Y., Cheng, H., Cheng, Q., Zhou, H., Li, M., Fan, Y., Shan, G., Damerow, L., Lammers, P.S. and Jones, S.B., 2017. A smart-vision algorithm for counting whiteflies and thrips on sticky traps using two-dimensional Fourier transform spectrum. Biosystems Engineering, 153, pp.82-88. http://dx.doi.org/10.1016/j.biosystemseng.2016.11.001.

 

103. Szymkiewicz, A., A. Gumuła-Kawęcka, J. Šimůnek, B. Leterme, S. Beegum, B. Jaworska-Szulc, M. Pruszkowska Caceres, W. Gorczewska-Langner, R. Angulo-Jaramillo, and D. Jacques, Simulation of freshwater lens recharge and salt/freshwater interfaces using the Hydrus and SWI2 packages for Modflow, Journal of Hydrology and Hydromechanics, 66(2), (in press).

 

104. Tang, Y., L. Marshall, A. Sharma, H. Ajami. 2017. A Bayesian Alternative for Multi-objective Ecohydrological Model Specification, Journal of Hydrology, https://doi.org/10.1016/j.jhydrol.2017.07.040

 

105. Tian, Z., T. Ren, Y. Kojima, Y. Lu, R. Horton, and J.L. Heitman. 2017. An improved thermo-time domain reflectometry method for determination of ice contents in partially frozen soils. Journal of Hydrology 555:786–796.

 

106. Tong, B., Z. Gao, R. Horton, and L. Wang. 2017. Soil apparent thermal diffusivity estimated by conduction and by conduction-convection heat transfer models. J. Hydrometeor. doi.org/10.1175/JHM-D-16-0086.1.

 

107. Wang, B., W. Zhang, H. Li, H. Fu, X. Qu, and D. Zhu. 2017. Micropore clogging by leachable pyrogenic organic carbon: A new perspective on sorption irreversibility and kinetics of hydrophobic organic contaminants to black carbon. Environmental Pollution, 220, 1349–1358.

 

108. Wang, D.J., C.Y. Sheng, Y. Jin, C. Su, L. Y. Chu, and D. M. Zhou. 2017. Role of solution chemistry in the retention and release of graphene oxide nanomaterials in uncoated and iron oxide-coated sand. of the Total Environ. 579:776-785.

 

109. Wang, Y., T. Ochsner, J. Heitman, R. Horton, X. Xue, and T. Ren. 2017. Weighing lysimeter data confirm the accuracy and precision of the heat-pulse technique for measuring daily soil evaporation. Soil Sci. Soc. Am. J. 81:1074–1078, doi:10.2136/sssaj2017.02.0049n.

 

110. Wang, Y., X. Zhang, X. Xiao, J. Heitman, R. Horton, and T. Ren. 2017. An empirical calibration for heat-balance sap-flow sensors in maize. Agron. J. 109:1–7, doi:10.2134/agronj2016.10.0611.

 

111. Wang, Z., M. Ankeny, and R. Horton. 2017. The impact of water vapor diodes on soil water redistribution. J. Hydrology 552:600–608. doi.org/10.1016/j.jhydrol.2017.07.009.

 

112. Wang, Z., R. Schwartz, Y. Kojima, Y. Chen, and R. Horton. 2017. A comparison of second-order derivative based models for time domain reflectometry waveform analysis. Vadose Zone J. 16. doi:10.2136/vzj2017.01.0014.

 

113. Wendroth, O. 2017. Wilfried Ehlers – Agronomist and Soil Physicist. Editorial. Soil Till. Res. 171:A1-A2, http://dx.doi.org/10.1016/ j.still.2017.04.005.

 

114. Wilson, G.V., J.L. Nieber, G.A. Fox, SM Dabney, M. Ursic, and J.R. Rigby, 2017. Threshold behavior of catchments with duplex hillslope soils feeding soil pipe networks, Hydrol. Process. J., 31: 1–20.

 

115. Wilson, G.V., R.R. Wells, R. Kuhnle, G.A. Fox, J.L. Nieber, 2017. Sediment detachment and transport processes associated with internal erosion of soil pipes: Often overlooked processes of gully erosion, Earth Surf. Proc. Landforms, DOI: 10.1002/esp.4147.

 

116. Wyatt, B.M., T.E. Ochsner, C.A. Fiebrich, C.R. Neel and D.S. Wallace. 2017. Useful drainage estimates obtained from a large-scale soil moisture monitoring network by applying the unit-gradient assumption. Vadose Zone J. 16. doi:10.2136/vzj2017.01.0016.

 

117. Xu, S, R. Attinti, E. Adams, J. Wei; K. Kniel, J. Zhuang*, Y. Jin. 2017. Mutually facilitated co-transport of two different viruses through reactive porous media. Water Res. 123:40-48. doi: 10.1016/j.watres.2017.06.039

 

118. Xue, Y., W. J. G. M. Peijnenbury, J. Huang, D. Wang, and Y. Jin. 2018. Tropic transfer of cadmium from Duckweed (Lemna minor L.) to Tilapia (Oreochromis mossambicus). DOI: 10.1002/etc.4076 Environ Toxicol & Chem. (in press)

 

119. Yan, J., X. Meng, and Y. Jin. 2017. Size-dependent turbidimetric quantification of suspended soil colloids. Vadose Zone J. 16(5). doi:10.2136/vzj2016.10.0098.

 

120. Yang, W., Y. Wang, P. Sharma, B. Li, K. Liu, J. Liu, M. Flury, and J. Shang, Effect of naphthalene on transport and retention of biochar colloids through saturated porous media, Colloids Surf. Physicochem. Eng. Aspects, 530, 146–154, 2017. (dx.doi.org/10.1016/j.colsurfa.2017.07.010)

 

121. Ying, S., Jiangjiang Zhang, Lingzao Zeng, Jiachun Shi, Laosheng Wu. Bayesian inference for kinetic models of biotransformation using a generalized rate equation. Science of the Total Enviroment. (2017). 592: 287-296.

 

122. Zhang, J., Weixuan Li, Guang Lin, Lingzao Zeng, Laosheng Wu. Efficient evaluation of small failure probability in high-dimensional groundwater contaminant transport modeling via a two-stage Monte Carlo method. Water Resources Research. (2017). 53: 1948-1962.


123. Zhang, M., S. A. Bradford, J. Šimůnek, H. Vereecken, and E. Klumpp, Roles of cation valance and exchange on the retention and colloid-facilitated transport of functionalized multi-walled carbon nanotubes in a natural soil, Water Research, 109, 358-366, doi: 10.1016/j.watres.2016.11.062, 2017a.

 

124. Zhang, M., I. Engelhardt, J. Šimůnek, S. A. Bradford, D. Kasel, A. E. Berns, H. Vereecken, and E. Klumpp, Co-transport of chlordecone and sulfadiazine in the presence of functionalized multi-walled carbon nanotubes in soils, Environmental Pollution, 221, 470-479, doi: 1016/j.envpol.2016.12.018, 2017b.

 

125. Zhang, X., H. Lei, L. Zhu, M. Qian, G. Yadavalli, J. Wu, and S. Chen, From plastics to jet fuel range alkanes via combined catalytic conversions, Fuel, 188, 28-38, 2017.

 

126. Zheng, Q., Wenjie Xu, Jun Man, Lingzao Zeng, Laosheng Wu. A probabilistic collocation based iterative Kalman filter for landfill data assimilation. Advances in Water Resources. (2017). 109: 170-180.

 

127. Zhang, W., Jiachun Shi, Laosheng Wu. Effects of different passivators and vermicomposting on fractionations of Cu and Zn from pig manure. Journal of Zhejiang University (Agric. & Life Sci.), 2017,43(6):678-685

 

128. Zhang, X., T. Ren, J. Heitman, and R. Horton. 2017. Advances in heat-pulse methods: measuring near-surface soil water content. Methods of Soil Analysis Vol. 2, doi:10.2136/msa2015.0032.

 

129. Zhou, H., Xiuling Yu, Cheng Chen, Lingzao Zeng, Shenggao Lu, Laosheng Wu. 2017. Application of synchrotron-based X-ray microcomputed tomography and high-performance pore-scale simulations to evaluate hydraulic properties of biocharamended soil aggregates. Soil Sci. Soc. Am. J. Accepted Paper, posted 10/12/2017. doi:10.2136/sssaj2017.02.0053

 

Theses/Dissertations:

1. Edwards, Emily Claire, 2017. Assessing the groundwater contamination risk of drywell-induced stormwater infiltration using analytical and numerical methods. University of California, Davis, 222 pages.


2. Ransom, Katherine Marie, 2017. Bayesian and machine learning methods for the analysis of nitrate in groundwater in the Central Valley, California, USA. Dissertation, University of California, Davis, 167 pages.

 

Patents

Liu, G., M. Wen, R. Horton, R. Ren, B.C. Si, J. Wang, and B. Li. 2017. In situ spacing-correcting heat pulse sensor and method for measuring sap flow or water flux. U.S. Patent 9638558. Date issued: 2 May 2017.

03/06/2019

1. Abolt, C.J., M.H. Young, A. Atchley, and D. Harp. 2018. Microtopographic control on the ground thermal regime in ice wedge polygons. The Cryosphere. 12:1957–1968. doi.org/10.5194/tc-12-1957-2018.


2. Abolt, C., T.G. Caldwell, B. Wolaver, and H. Pai (2018), Unmanned aerial vehicle-based monitoring of groundwater inputs to surface waters using an economical thermal infrared camera, Opt. Eng., 57(5), 053113, 9, 10.1117/1.OE.57.5.053113.


3. Adrian, Y. F., U. Schneidewind, S. A. Bradford, J. Šimůnek, T. M. Fernandez-Steeger, and R. Azzam, Transport and retention of surfactant- and polymer-stabilized engineered silver nanoparticles in silicate-dominated aquifer material, Environmental Pollution, 236, 195-207, doi: 10.1016/j.envpol.2018.01.011, 2018.


4. Ajami, H., A. Sharma. 2018. Disaggregating Soil Moisture to Finer Spatial Resolutions - A Comparison of Alternatives, Water Resources Research, https://doi.org/10.1029/2018WR022575


5. Akuoko, O., D. Kool, T.J. Sauer, and R. Horton. 2018. Surface energy balance partitioning in tilled bare soils. Agric. Environ. Lett. 3:180039. doi:10.2134/ael2018.07.0039


6. Arciniega-Esparza, S., J.A. Breña-Naranjo, A. Hernández-Espriú, A. Pedrozo-Acuña, B.R. Scanlon, J.-P. Nicot, M.H. Young, B.D. Wolaver. 2017. Baseflow recession analysis in a large shale play: climate variability and anthropogenic alterations mask effects of hydraulic fracturing. J. Hydro. 533:160-171. https://doi.org/10.1016/j.jhydrol.2017.07.059.


7. Arthur, E., M. Tuller, P. Moldrup, M.H. Greve, M. Knadel, and L.W. de Jonge, 2018. Applicability of the Guggenheim–Anderson–Boer water vapour sorption model for estimation of soil specific surface area. Eur. J. Soil Sci., 69(1):245-255, doi: 10.1111/ejss.12524.


8. Arthur, J. D., N. W. Mark, S. Taylor, J. Šimůnek, M. L. Brusseau, and K. M. Dontsova, Dissolution and transport of insensitive munitions formulations IMX-101 and IMX-104 in saturated soil columns, Science of Total Environment, 624, 758-768, doi: 10.1016/j.scitotenv.2017.11.307, 2018.


9. Arya, L.M., and J.L. Heitman. 2018. Response to “Comment on ‘A Non-Empirical Method for Computing Pore Radii and Soil Water Characteristics from Particle Size Distribution’ by Arya and Heitman (2015)”. Soil Sci. Soc. Am. J. 82:1595-1596.


10. Baatz, R, Sullivan, P.R., Li, L., Weintraub, S.R., Loescher H.W., Mirtl, M., Groffman, P.M., Young, M. H., and others, 2018, Steering operational synergies in terrestrial observation networks: opportunity for advancing Earth system dynamics modelling: Earth Surface Dynamics, 9:593-609, http://doi.org/10.5194/esd-9-593-2018.


11. Babaeian, E., M. Sadeghi, S.B. Jones, and M. Tuller, 2018. Mapping soil moisture with the OPtical TRApezoid Model (OPTRAM) based on long-term MODIS observations. Remote Sens Environ., 211:425-440, doi: 10.1016/j.rse.2018.04.029.


12. Bandala, E.R. and M. Berli. 2018. Nanomaterials: New agrotechnology tools to improve soil quality? In: F. López-Valdez and F. Fernández-Luqueño, editors, Agricultural nanobiotechnology: Modern agriculture for a sustainable future. Springer Nature, Cham, Switzerland. p. 127-140.


13. Basinger, N.T., K.M. Jennings, D. Monks, W. Mitchem, J.L. Heitman, S. Chaudhari, J.L. Havlin, A.M. Howard, S.E. Spayd. 2018. Effect of Herbicide Strip Width and Postveraison Competition on Cabernet Franc, Growth, Berry Composition, and Yield. Catalyst. DOI:10.5344/catalyst.2018.17005.


14. Bayat, H., B. Mazaheri, and B.P. Mohanty, Estimating Soil Water Characteristic Curve using Landscape Features and Soil Thermal Properties, Soil and Tillage Research, 189, 1-14, 2019.


15. Beegum, S., J. Šimůnek, A. Szymkiewicz, K. P. Sudheer, and I. M. Nambi, Updating the coupling algorithm between HYDRUS and MODFLOW in the ‘HYDRUS Package for MODFLOW’, Technical Note, Vadose Zone Journal, 17(1), 180034, 8 p., doi: 10.2136/vzj2018.02.0034, 2018.


16. Beegum, S., J. Šimůnek, A. Szymkiewicz, K. P. Sudheer, and I. M. Nambi, Implementation of solute transport in the vadose zone into the 'HYDRUS package for MODFLOW', Groundwater, 17 p., doi: 10.1111/gwat.12815, (accepted July 29 2018). (https://doi.org/10.1111/gwat.12815)


17. Bhalsod, G.D., Y.-H. Chuang, S. Jeon, W.J. Gui, Hui Li, E.T. Ryser, A.K. Guber, and W. Zhang. 2018. Uptake and accumulation of pharmaceuticals in overhead- and surface-irrigated greenhouse lettuce. Journal of Agricultural and Food Chemistry, 66(4), 822–830. DOI: 10.1021/acs.jafc.7b04355.


18. Bindlish, R., M. H. Cosh, T. J. Jackson, T. Koike, H. Fujii, S. K. Chan, J. Asanuma, A. Berg, D. D. Bosch, T.G. Caldwell, C. H. Collins, H. McNairn, J. Martínez-Fernández, J. Prueger, T. Rowlandson, M. Seyfried, P. Starks, M. Thibeault, R. V. D. Velde, J. P. Walker, and E. J. Coopersmith (2018), GCOM-W AMSR2 Soil Moisture Product Validation Using Core Validation Sites, IEEE J-STARS, 11, 209-219, 10.1109/JSTARS.2017.2754293.


19. Brunetti, G., J. Šimůnek, M. Turco, and P. Piro, On the use of global sensitivity analysis for the numerical analysis of permeable pavements, Urban Water Journal, 15(3), 269-275, doi: 10.1080/1573062X.2018.1439975, 2018a.


20. Brunetti, G., J. Šimůnek, H. Bogena, R. Baatz, J. A. Huisman, H. Dahlke, and H. Vereecken, On the information content of cosmic-ray neutrons in Bayesian optimization of soil hydraulic properties, Vadose Zone Journal, doi: 10.2136/vzj2018.06.0123, (accepted September 24 2018).


21. Brye, K.R., A.L.M. Daigh, and R.L. McMullen. 2018. Seasonal effects on leachate quality from an Ozark Highlands managed grassland using automated, equilibrium tension lysimeters. Vadose Zone Journal 17:160082 doi:10.2136/vzj2016.09.0082.


22. Caldwell, T.G., M. Cosh, T. Bongiovanni, *C. Halley, M.H. Young 2018. Field and Laboratory Evaluation of the CS655 Soil Water Content Sensor. Vadose Zone J. http://doi.org/10.2136/vzj2017.12.0214.


23. Chan, S. K., R. Bindlish, P. O'Neill, T. Jackson, E. Njoku, S. Dunbar, J. Chaubell, J. Piepmeier, S. Yueh, D. Entekhabi, A. Colliander, F. Chen, M. H. Cosh, T. Caldwell, J. Walker, A. Berg, H. McNairn, M. Thibeault, J. Martínez-Fernández, F. Uldall, M. Seyfried, D. Bosch, P. Starks, C. Holifield Collins, J. Prueger, R. van der Velde, J. Asanuma, M. Palecki, E. E. Small, M. Zreda, J. Calvet, W. T. Crow, and Y. Kerr (2018), Development and assessment of the SMAP enhanced passive soil moisture product, Remote Sens. Environ., 204, 931-941, https://doi.org/10.1016/j.rse.2017.08.025.


24. Chen, G., H. Liu, W. Zhang, B. Li, L. Liu, and G. Wang. 2018. Roxarsone exposure jeopardizes nitrogen removal and regulates bacterial community in biological sequential batch reactors. Ecotoxicology and Environmental Safety, 159, 232–239. DOI: 10.1016/j.ecoenv.2018.05.012.


25. Chen, J., C. Shang, M. J. Eick, and R. D. Stewart. 2018. Water repellency decreases vapor sorption of clay minerals. Water Resources Research. doi: 10.1029/2018WR023352.


26. Chen, Z. B.P. Mohanty, and I. Rodriguez-Iturbe, Space-Time Modeling of Soil Moisture, Advances in Water Resources, 109: 343-354, 2017.


27. Chuang, Y.-H., C.-H. Liu, R. Hammerschmidt, W. Zhang, S.A. Boyd, and H. Li. 2018. Metabolic demethylation and oxidation of caffeine during uptake by lettuce. Journal of Agricultural and Food Chemistry, 66(30), 7907–7915. DOI: 10.1021/acs.jafc.8b02235. (2017-2018 IF: 3.412)


28. Clewley, D., J. B. Whitcomb, R. Akbar, A. R. Silva, A. Berg, J. R. Adams, T.G. Caldwell, D. Entekhabi, and M. Moghaddam (2017), A method for upscaling in situ soil moisture measurements to satellite footprint scale using random forests, IEEE J-STARS, 1-11, 10.1109/JSTARS.2017.2690220.


29. Colliander, A., T. J. Jackson, S. K. Chan, P. O'Neill, R. Bindlish, M. H. Cosh, T. Caldwell, J. P. Walker, A. Berg, H. McNairn, M. Thibeault, J. Martinez-Fernandez, K. H. Jensen, J. Asanuma, M. S. Seyfried, D. D. Bosch, P. J. Starks, C. H. Collins, J. H. Prueger, Z. Su, E. Lopez-Baeza, and S. H. Yueh (2018), An assessment of the differences between spatial resolution and grid size for the SMAP enhanced soil moisture product over homogeneous sites, Remote Sens. Environ., 207, 65-70.


30. Colliander, A., T. J. Jackson, R. Bindlish, S. Chan, N. Das, S. B. Kim, M. H. Cosh, R. S. Dunbar, L. Dang, L. Pashaian, J. Asanuma, K. Aida, A. Berg, T. Rowlandson, D. Bosch, T.G. Caldwell, K. Caylor, D. Goodrich, H. al Jassar, E. Lopez-Baeza, J. Martínez-Fernández, A. González-Zamora, S. Livingston, H. McNairn, A. Pacheco, M. Moghaddam, C. Montzka, C. Notarnicola, G. Niedrist, T. Pellarin, J. Prueger, J. Pulliainen, K. Rautiainen, J. Ramos, M. Seyfried, P. Starks, Z. Su, Y. Zeng, R. van der Velde, M. Thibeault, W. Dorigo, M. Vreugdenhil, J. P. Walker, X. Wu, A. Monerris, P. E. O'Neill, D. Entekhabi, E. G. Njoku, and S. Yueh (2017), Validation of SMAP surface soil moisture products with core validation sites, Remote Sens. Environ., 191, 215-231, DOI: 10.1016/j.rse.2017.01.021


31. Cruz, J.J., A.G. Fernald, D.M. VanLeeuwen, S.J. Guldan, and C.G. Ochoa. 2018. River-ditch flows relationship analysis in an agricultural valley of northern New Mexico. Journal of Irrigation Drainage and Engineering, 144(11): 1–12.


32. Cude, S.M., M.D. Ankeny, J.B. Norton, T.J. Kelleners, and C.F. Strom. 2018. Capillary barriers improve reclamation in drastically disturbed semiarid shrubland. Arid Land Research and Management 32:259-276.


33. Daigh, A.L.M., U. Ghosh, J. DeJong-Hughes, and R. Horton. 2018. Spatial response of near-surface soil water contents to newly imposed soil management. Agric. Environ. Lett. 3:180032. doi:10.2134/ael2018.06.0032


34. Daigh, A.L.M., W. Dick, M. Helmers, R. Lal, J. Lauer, E. Nafziger, C. Pederson, J. Strock, M.B. Villamil, A. Mukherjee, and R. Cruse. 2018. Yields and yield stability of no-till and chisel-plow corn and soybean fields in Midwestern US Corn Belt. Field Crops Research 218:243-253.


35. Darzi-Naftchali, A., F. Karandish, and J. Šimůnek, Numerical modeling of soil water dynamics in subsurface drained paddies with midseason drainage or alternate wetting and drying management, Agricultural Water Management, 197, 67-78, doi: 10.1016/j.agwat.2017.11.017, 2018.


36. Das, N. N., D. Entekhabi, R. S. Dunbar, A. Colliander, F. Chen, W. Crow, T. J. Jackson, A. Berg, D. D. Bosch, T. G. Caldwell, M. H. Cosh, C. H. Collins, E. Lopez-Baeza, M. Moghaddam, T. Rowlandson, P. J. Starks, M. Thibeault, J. P. Walker, X. Wu, P. E. O'Neill, S. Yueh, and E. G. Njoku (2018), The SMAP mission combined active-passive soil moisture product at 9 km and 3 km spatial resolutions, Remote Sens. Environ., 211, 204-217, https://doi.org/10.1016/j.rse.2018.04.011.


37. Day, S.J., J.B. Norton, C.F. Strom, T.J. Kelleners, and E.F. Aboukila. 2018. Gypsum, langbeinite, sulfur, and compost for reclamation of drastically disturbed calcareous saline-sodic soils. International Journal of Environmental Science and Technology doi 10.1007/s13762-018-1671-5.


38. de la Mota, F. J., S. D. Day, J. S. Owen, R. D. Stewart, M. S. Steele, V. Sridhar. 2018. Porous-Permeable Pavements Promote Growth and Establishment and Modify Root Depth Distribution of Platanus ×acerifolia (Aiton) Willd. in Simulated Urban Tree Pits. Urban Forestry & Urban Greening. 33: 27-36. doi: 10.1016/j.ufug.2018.05.003.


39. Degré, A., M. J. van der Ploeg, T.G. Caldwell, and H. P. A. Gooren (2017), Comparison of soil water potential sensors: A drying experiment, Vadose Zone J., 16, 10.2136/vzj2016.08.0067.


40. Dijkema, J., J.E. Koonce, R.M. Shillito, T.A. Ghezzehei, M. Berli, M. van der Ploeg, et al. 2018. Water Distribution in an Arid Zone Soil: Numerical analysis of data from a large weighing lysimeter. Vadose Zone Journal. doi:10.2136/vzj2017.01.0035.


41. Dose, H., Hopkins, D., Casey, F. 2018. Soil property distribution following oil well access road removal. Canadian Journal of Soil Science, 98:369-380.


42. Elad Levintal, Maria I. Dragila, Nadav G. Lensky, and Noam Weisbrod, 2018. Mechanisms controlling air stratification within a large diameter borehole and atmospheric exchange, Journal of Geophysical Research #2018JF004729R


43. Fan, Y., …, B.P. Mohanty, … (total 37 authors), Structures and Functions of Hillslope Hydrology with Relevance to Earth System Modeling: Syntheses and Testable Hypotheses, Water Resources Research. In Press, 2018.


44. Fu, W., X. Zhang, J. Zhao, S. Du, R. Horton, and M. Hou. 2018. Artificial warming-mediated soil freezing and thawing processes can regulate soybean production in Northeast China. Agricultural and Forest Meteorology 262:249-257. doi.org/10.1016/j.agrformet.2018.07.015


45. Fu Z, Gerken T, Bromley G, Araújo A, Bonal D, Burban B, Ficklin D, Fuentes JD, Goulden M, Hirano T, Kosugi Y, Liddell M, Nicolini G, Niu S, Roupsard O, Stefani P, Mi C, Tofte Z, Xiao J, Valentini R, Wolf S, Stoy PC (2018) Net ecosystem carbon dioxide exchange in tropical rainforests: Sensitivity to environmental drivers and flux measurement methodology. Agricultural and Forest Meteorology 263: 292-307. DOI: 10.1016/j.agrformet.2018.09.001.


46. Fullhart, A.T., T.J. Kelleners, D.G. Chandler, J.P. McNamara, and M.S. Seyfried. 2018. Water flow modeling with dry bulk density optimization to determine hydraulic properties in mountain soils. Soil Science Society of America Journal 82:31-44.


47. Gaur, N., and B.P. Mohanty, Land-Surface Controls on Near-Surface Soil Moisture Dynamics: Traversing Remote Sensing Footprints, Water Resources Research. 52, doi:10.1002/2015WR018095, 2016.


48. Gaur, N., and B.P. Mohanty, A Nomograph Incorporating Geophysical Heterogeneity in Soil Moisture Scaling, Water Resources Research. doi:10.1029/2018WR023513, 2018.


49. Gerken T, Williams S, Bromley GT, Ruddell BL, Stoy PC (2018) Convective suppression before and during the United States Northern Great Plains flash drought of 2017. Hydrology and Earth System Sciences 22: 4155–4163. DOI: 10.5194/hess-2018-211.


50. Gerken T, Bromley G, Stoy PC (2018) Surface moistening trends in the northern North American Great Plains increase the likelihood of convective initiation. Journal of Hydrometeorology 19: 227-244. DOI: 10.1175/JHM-D-17-0117.1.


51. Gerken T, Ruddell BL, Fuentes JD, Araújo A, Brunsell NA, Maia J, Manzi A, Mercer J, Nascimento dos Santos R, von Randow C, Stoy PC (2018) Investigating the mechanisms responsible for the lack of eddy covariance energy balance closure in a central Amazonian tropical rainforest. Agricultural and Forest Meteorology 255: 92-103, DOI: 10.1016/j.agrformet.2017.03.023.


52. Gholoubi, A., H. Emami, S.B. Jones, and M. Tuller, 2018. A Novel Shortwave Infrared Proximal Sensing Approach to Quantify the Water Stability of Soil Aggregates. Soil Sci. Soc. Am. J., 82(6):1358--1366.


53. Han J, Shi L, Wang Y, Chen Z, and Laosheng Wu. 2018. The regulatory role of endogenous iron on greenhouse gas emissions under intensive nitrogen fertilization in subtropical soils of China. Environmental Science and Pollution Research pp 1–10.


54. Hartmann, A., J. Šimůnek, M. K. Aidoo, S. J. Seidel, and N. Lazarovitch, Implementation and application of a root growth module in HYDRUS, Vadose Zone Journal, 17(1), 170040, 16 p., doi: 10.2136/vzj2017.02.0040, 2018.


55. He, H., M.F. Dyck, R. Horton, M. Li, H. Jin, and B. Si. 2018. Distributed temperature sensing for soil physical measurements and its similarity to heat pulse method. Advances in Agronomy, Volume 148:173-230. Elsevier Inc., ISSN 0065-2113, doi.org/10.1016/bs.agron.2017.11.003


56. He, H., M.F. Dyck, R. Horton, T. Ren, K.L. Bristow, J. Lv, and B. Si. 2018. Development and application of the heat pulse method for soil physical measurements. Reviews of Geophysics. 56. doi.org/10.1029/2017RG000584


57. He, M., H. Shen, Z. Li, L. Wang, F. Wang, K. Zhao, X. Liu*, O. Wendroth, and J. Xu. 2019. Ten-year regional monitoring of soil-rice grain contamination by heavy metals with implications for target remediation and food safety. Environ. Poll. 244:431-439. https://doi.org/10.1016/j.envpol.2018.10.070


58. He, Y., DeSutter, T., Norland, J., Chatterjee, A., Casey, F., Clay, D. 2018. The measurement, prediction, and development of soil management zones in low-relief sodic soils. Precision Agriculture 19:858-875


59. Henry, C.J., J.A. Brant, and T.J. Kelleners. 2018. Water transport mechanisms for salt-rejecting membranes driven by soil-water potentials. Journal of Membrane Science 563:107-114.


60. Hooks T.N., G. A. Pichionni, B. J. Schutte, M.K. Shukla, and D. Daniel. 2018. Sodium chloride effects on seed germination, growth, and evapotranspiration of Lepidium alyssoides, L. draba, and L. latifolium: traits of resistance and implications for invasiveness on saline soils. Rangeland Ecology & Management. 71:433-442.


61. Hu, E., P. Sutitarnnontr, M. Tuller, and S.B. Jones, 2018. Modeling temperature and moisture dependent emissions of carbon dioxide and methane from drying dairy cow manure. Front. Agr. Sci. Eng., 5(2), doi: 10.15302/J-FASE-2018215.


62. Jacques, D., J. Šimůnek, D. Mallants, and M. Th. van Genuchten, The HPx software for multicomponent reactive transport during variably-saturated flow: Recent developments and applications, Journal of Hydrology and Hydromechanics, 66(2), 211-226, doi: 10.1515/johh-2017-0049, 2018.


63. Jian, M., A.A. Berhe, M. Berli and T.A. Ghezzehei. 2018. Vulnerability of physically protected soil organic carbon to loss under low severity fires. Frontiers in Environmental Science 6: 66-77. doi:10.3389/fenvs.2018.00066.


64. Jian, M., M. Berli and T.A. Ghezzehei. 2018. Soil structural degradation during low-severity burns. Geophysical Research Letters 45: 5553-5561. doi:0.1029/2018GL078053.


65. Ju, L., Jiangjiang Zhang, Laosheng Wu, and Lingzao Zeng. 2018. Bayesian monitoring design for streambed heat tracing: Numerical simulation and sandbox experiments. Groundwater. https://doi.org/10.1111/gwat.12823.


66. Ju, L., Zhang Jiangjiang, Meng Long, Laosheng Wu and Lingzao Zeng. 2018. An adaptive Gaussian process-based iterative ensemble smoother for data assimilation. Advances in Water Resources, 115: 125-135.


67. Ju, L., Jiangjiang Zhang, Cheng Chen, Laosheng Wu, and Lingzao Zeng. 2018. Water flux characterization through hydraulic head and temperature data assimilation: Numerical modeling and sandbox experiments. Journal of Hydrology, 558: 104–114.


68. Karandish, F., A. Darzi-Naftchali, and J. Šimůnek, Application of HYDRUS (2D/3D) for predicting the influence of subsurface drainage on soil water dynamics in a rainfed-canola cropping system, Irrigation and Drainage Journal, 67, Supplement 2, 29-39, doi: 10.1002/ird.2194, 2018.


69. Karandish, F., and J. Šimůnek, An application of the Water Footprint concept to optimize the production of crops irrigated with saline water: Scenario assessment with HYDRUS, Agricultural Water Management, 208, 67-82, 2018.


70. Karandish, F., and J. Šimůnek, A comparison of the HYDRUS (2D/3D) and SALTMED models to investigate the influence of various water-saving irrigation strategies on the maize water footprint, Agricultural Water Management, 213, 809-820, doi: 10.1016/j.agwat.2018.11.023, 2019.


71. Karimov, A. K., M. A. Hanjra, J. Šimůnek, andM. Avliyakulov, Can a change in cropping pattern produce water savings and social gains: A case study from the Fergana Valley, Central Asia, Journal of Hydrology and Hydromechanics, 66(2), 189-201, doi: 10.1515/johh-2017-0054, 2018.


72. Kacimov, A., Y. Obnosov, and J. Šimůnek, Steady flow from an array of subsurface emitters: Kornev’s irrigation technology and Kidder’s free boundary problems revisited, Transport in Porous Media, 121(3), 643-664, doi: 10.1007/s11242-017-0978-x, 2018.


73. Kathuria, D., B.P. Mohanty, and M. Katzfuss, A Non-Stationary Geostatistical Framework for Soil Moisture Prediction in the Presence of Heterogeneity, Water Resources Research. In Press , 2019.


74. Kathuria, D., B.P. Mohanty, and M. Katzfuss, Multiscale Data Fusion for Soil Moisture Estimation: A Spatial Hierarchical Approach, Water Resources Research. Submitted.


75. Kellum D.S., M.K. Shukla, J. Mexal and S. Deb. 2018. Greenhouse gas emissions from pecan orchards in semi-arid southern New Mexico. Hort Sci. 53:704-709.


76. Kersebaum, K.C., E. Wallor, K. Lorenz, N. Beaudoin, J. Constantin, and O. Wendroth. 2018. Modeling cropping systems with HERMES – Model capability, deficits and data requirements. In: Wendroth, O., R.J. Lascano, and L. Ma (Eds.) Bridging among disciplines by synthesizing soil and plant processes. Advances in Agricultural Systems Modeling, Volume 8: 103-126, ASA, CSSA, SSSA, Madison, WI 53711-5801, USA.


77. Khan, U., H. Ajami, N.K. Tuteja, A. Sharma, S. Kim. 2018. Catchment Scale Simulations of Soil Moisture Dynamics Using an Equivalent Cross-Section based Hydrological Modelling Approach, Journal of Hydrology, 564: 944-966, https://doi.org/10.1016/j.jhydrol.2018.07.066


78. Kim, J., and B.P. Mohanty, Influence of Lateral Subsurface Flow and Connectivity on Soil Water Storage in Land Surface Modeling, Journal of Geophysical Research -Atmosphere. 121, doi:10.1002/2015JD024067, 2016.


79. Kim, J., and B.P. Mohanty, A Physically-Based Hydrological Connectivity Algorithm for Describing Spatial Patterns of Soil Moisture in the Unsaturated Zone, Journal of Geophysical Research -Atmosphere. 122, doi:10.1002/2016JD025591, 2017.


80. Kleindl WJ, Stoy PC, Binford M, Desai A, Dietze MC, Schultz C, Starr G, Staudhammer C, Wood DJA (2018) Toward a socioecological theory of forest macrosystems. Forests 9(4), 200. DOI: 0.3390/f9040200.


81. Klopp, H. A.L.M. Daigh, and T. DeSutter. 2018. Soil shrinkage characteristics as affected by solution composition and mineral contents. Communications in Soil Science and Plant Analysis 49:170-180.


82. Kojima, Y., J.L. Heitman, K. Noborio, T. Ren, and R. Horton. 2018. Sensitivity analysis of temperature changes for determining thermal properties of partially frozen soil with a dual probe heat pulse sensor. Cold Regions Science and Technology 151:188–195, doi.org/10.1016/j.coldregions.2018.03.022.


83. Kojima, Y., J.L. Heitman, M. Sakai, C. Kato, and R. Horton. 2018. Bulk density effects on soil hydrologic and thermal characteristics: a numerical investigation. Hydrological Processes. 32:2203-2216. DOI: 10.1002/hyp.13152


84. Kolassa, J., R. H. Reichle, Q. Liu, S. H. Alemohammad, P. Gentine, K. Aida, J. Asanuma, S. Bircher, T. Caldwell, A. Colliander, M. Cosh, C. Holifield Collins, T. J. Jackson, J. Martínez-Fernández, H. McNairn, A. Pacheco, M. Thibeault, and J. P. Walker (2018), Estimating surface soil moisture from SMAP observations using a Neural Network technique, Remote Sens. Environ., 204, 43-59, https://doi.org/10.1016/j.rse.2017.10.045.


85. Kustas, W.P., N. Agam, J.G. Alfieri, L.G. McKee, J.H. Prueger, L.E. Hipps, A.M. Howard, and J.L. Heitman. 2018. Below Canopy Radiation Divergence in a Vineyard: Implications on Interrow Surface Energy Balance. Irrigat. Sci. https://doi.org/10.1007/s00271-018-0601-0.


86. Kustas, W.P., M.C. Anderson, J.G. Alfieri, K. Knipper, A. Torres-Rua, C.K. Parry, H. Hieto, N. Agam, A. White, F. Gao, L. McKee, J.H. Prueger, L.E. Hipps, S. Los, M. Alsina, L. Sanchez, B. Sams, N. Dokoozlian, M. McKee, S. Jones, Y. Yang, T.G. Wilson, F. Lei, A. McElrone, J.L. Heitman, A.M. Howard, K. Post, F. Melton, C. Hain. 2018. The Grape Remote sensing Atmospheric Profile and Evapotranspiration eXperiment (GRAPEX). Bull. Am. Meteor. Soc. doi:10.1175/BAMS-D_16-0244.1


87. Levintal, Elad, Maria I Dragila, Noam Weisbrod, Impact of wind speed and soil permeability on aeration time in the upper vadose zone, in process of final review, AGRFORMET-D-18-00626R1


88. Li, Q., X.J., Chen, X. Chen, Y. Jin, and J. Zhuang. 2018. Cadmium removal from soil by fulvic acid-aided hydroxyapatite nanofluid. Chemosphere, 215: 227-233, doi.org/10.1016/j.chemosphere.2018.10.031


89. Li, S., W. Shi, W. Liu, H. Li, W. Zhang, J. Hu, Y. Ke, W. Sun, and J. Ni. 2018. A duodecennial national synthesis of antibiotics in China’s major rivers and seas (2005–2016). Science of the Total Environment, 615, 906-917. DOI: 10.1016/j.scitotenv.2017.09.328.


90. Li, Y., Y.-H. Chuang, J.B. Sallach, W. Zhang, S.A. Boyd, and H. Li. 2018. Potential metabolism of pharmaceuticals in radish: Comparison of in vivo and in vitro exposure. Environmental Pollution, 242, 962-969. DOI: 10.1016/j.envpol.2018.07.060.


91. Long J, Gerken T, Stoy PC (2018) Tornado seasonality in the southeastern United States. Weather and Climate Extremes 20: 81-91. DOI: 10.1016/j.wace.2018.03.002.


92. Liang, Y., S, A. Bradford, J. Šimůnek, and E. Klumpp, Mechanism of graphene oxide aggregation, retention, and release in quartz sand, Science of the Total Environment, 656, 70-79, doi: 10.1016/j.scitotenv.2018.11.258, 2019.


93. Liu, K., G. Huang, X. Xu, Y. Xiong, Q. Huang, and J. Šimůnek, A coupled model for simulating water flow and solute transport in furrow irrigation, Agricultural Water Management, 213, 792-802, 2019.


94. Lopez, S., A.F. Cibils, U.R. Smedly, S.J. Guldan, A.G. Fernald, C.G. Ochoa, K. Boykin, and L. Cibils. 2018. Linkages between acequia farming and rangeland grazing in traditional agropastoral communities of the southwestern USA. Sustainability, 10(2021): 1–17. doi:10.3390/su10062021


95. Lou J., L. Yang, H. Wang, Laosheng Wu, and J. Xu. Assessing soil bacterial community and dynamics by integrated high-throughput absolute abundance quantification. PeerJ 6: e4514. https://doi.org/10.7717/peerj.4514


96. Lu, Y., R. Horton, and T. Ren. 2018. Simultaneous determination of soil bulk density and water content: a heat pulse‐based method. European Journal of Soil Science 69:947-952. doi: 10.1111/ejss.12690.


97. Lu, Y., R. Horton, X. Zhang, and T. Ren. 2018. Accounting for soil porosity improves a thermal inertia model for estimating surface soil water content. Remote Sensing of Environment 212:79–89, doi.org/10.1016/j.rse.2018.04.045.


98. Lu, Y., X. Liu, M. Zhang, J. Heitman, R. Horton, and T. Ren. 2018. Summary of thermo–time domain reflectometry method: advances in monitoring in situ soil bulk density. Soil Sci. Soc. Am. J. 82:4:733-733. doi:10.2136/sssaj2018.01.0053


99. Luo, C., Z. Wang, T.J. Sauer, M.J. Helmers, and R. Horton. 2018. Portable canopy chamber measurements of evapotranspiration in corn, soybean, and reconstructed prairie. Agricultural Water Management 198:1–9, doi.org/10.1016/j.agwat.2017.11.024.


100. Luo, Z., J. Niu, L. Zhang, X. Chen, W. Zhang, B. Xie, J. Du, Z. Zhu, S. Wu, and X. Li. 2018. Roots-enhanced preferential flows in deciduous and coniferous forest soils revealed by dual-tracer experiments. Journal of Environmental Quality, 48(1), 136-146. DOI: 10.2134/jeq2018.03.0091.


101. Man, J., Jiangjiang Zhang, Laosheng Wu, and Lingzao Zeng. 2018. ANOVA-based multi-fidelity probabilistic collocation method for uncertainty quantification. Advances in Water Resources. 122: 176-186.


102. Mao, H., N. Duffield, D. Kathuria, and B.P. Mohanty, Gap Filling of High-Resolution Soil Moisture for SMAP/Sentinel-1: A Two-layer Machine Learning-based Framework with Spatial/Temporal Transfer Learning, Water Resources Research. Submitted.


103. Mohanty, B.P., Soil Hydraulic Property Estimation Using Remote Sensing: A Review, Vadose Zone Journal. doi:10.2136/vzj2013.06.0100, 2013.


104. Mohanty, B.P., M. Cosh, V. Lakshmi, and C. Montzka, Soil Moisture Remote Sensing – State-of-the- Science, Vadose Zone Journal. doi:10.2136/vzj2016.10.0105, 2017 (5000+ time read paper in 2017-18)


105. Nelson, R., E., McGinnis, A.L.M. Daigh. 2018. Rain garden sedges tolerate cyclical flooding and drought. HortScience. 53:1669-1676. doi:10.21273/HORTSCI13234-18.


106. Nelson, R., McGinnis, A.L.M. Daigh. 2018. Perigynia removal improved germination in two native sedge. Seed Science and Technology. 46:48-495. doi:10.15258/sst.2018.46.3.06


107. Nydia Celis, Donald L. Suarez, Laosheng Wu, Rui Li, Mary Lu Arpaia and Peggy Mauk. 2018. Salt Tolerance and Growth of 13 Avocado Rootstocks Related Best to Chloride Uptake. HortScience, 53 (12): p1737-1745.


108. O’Brien, P.L., T.M. DeSutter, F.X.M. Casey, A.L.M. Daigh, J.L. Heitman, N.E. Derby, and E. Khan. 2018. Daytime surface energy fluxes over soil material remediated using thermal desorption. Agrosystems, Geosciences & Environment. 1:180027. doi:10.2134/age2018.08.0027


109. O'Brien, P. L., DeSutter, T., Casey, F. 2018. Natural degradation of low-level petroleum hydrocarbon contamination under crop management. Journal of Soils and Sediments doi:10.1007/s11368-018-2153-6


110. O'Brien, P. L., DeSutter, T., Casey, F., Khan, E., Wick, A. 2018. Thermal remediation alters soil properties - a review. Journal of Environmental Management 2016:826-835


111. O’Brien, P., U. Acharya, R. Alghamdi, A.R. Niaghi, D. Sanyal, Jeremy Wirtz, A.L.M. Daigh, and T. DeSutter. 2018. Hydromulch application to bare soil: Soil temperature dynamics and evaporative fluxes. Agriculture and Environmental Letters 3:180014. doi:10.2134/ael2018.03.0014.


112. Ochsner, T.E., T.W. Schumacher, R.T. Venterea, G.W. Feyereisen and J.M. Baker. 2017. Soil Water Dynamics and Nitrate Leaching Under Corn–Soybean Rotation, Continuous Corn, and Kura Clover. Vadose Zone J. doi:10.2136/vzj2017.01.0028.


113. Ochoa C.G., P. Caruso, G. Ray, T. Deboodt, W.T. Jarvis, and S.J. Guldan. 2018. Ecohydrologic connections in semiarid watershed systems of central Oregon U.S.A. Water, 10(181): 1–19, doi:10.3390/w10020181.


114. Oliphant AJ, Stoy PC (2018) An evaluation of semi-empirical models for partitioning photosynthetically active radiation into diffuse and direct beam components. Journal of Geophysical Research 123: 889-901. DOI:10.1002/2017JG004370.


115. Ouellette, J. D., J. T. Johnson, A. Balenzano, F. Mattia, G. Satalino, S. B. Kim, R. S. Dunbar, A. Colliander, M. H. Cosh, T.G. Caldwell, J. P. Walker, and A. A. Berg (2017), A time-series approach to estimating soil moisture from vegetated surfaces using L-Band radar backscatter, IEEE Trans. Geosci. Remote Sens., PP, 1-8, 10.1109/TGRS.2017.2663768.


116. Ozturk, O., M.K. Shukla, B. Stringam and C. Gard. 2018. Irrigation water salinity induced changes in the evaporation, growth and ion uptake of two halophytes. J Ag. Water Manag. 195: 142-153.


117. Parke, Jennifer, Carol Mallory-Smith, Maria Dragila, Brian Hill, Nami Wada, Clara Weidman, Leonard Coop and Kristine Buckland, 2018, Soil solarization – a potential tool for organic growers to manage weeds and improve soil health, The Organic Farmer Magazine, p.12, Issue: Dec 2018- Jan 2019. http://organicfarmermag.com. Article at https://www.yumpu.com/en/document/fullscreen/62280511/organic-farmer-dec-jan-2019


118. Phogat, V., T. Pitt, J. W. Cox, J. Šimůnek, and M. A. Skewes, Soil water and salinity dynamics under sprinkler irrigated almond exposed to a varied salinity stress at different growth stages, Agricultural Water Management, 201, 70-82, doi: 10.1016/j.agwat.2018.01.018, 2018a.


119. Phogat, V., J. W. Cox, and J. Šimůnek, Identifying the future water and salinity risks to irrigated viticulture in the Murray-Darling Basin, South Australia, Agricultural Water Management, 201, 107-117, doi: 10.1016/j.agwat.2018.01.025, 2018b.


120. Phogat, V., J. W. Cox, J. Šimůnek, and P. Hayman, Modeling water and salinity risks to viticulture under prolonged sustained deficit and saline water irrigation, Journal of Water and Climate Change, 9, doi: 10.2166/wcc.2018.186, (accepted May 3 2018). (https://doi.org/10.2166/wcc.2018.186)


121. Pierre, J.P., M.H. Young, B.D. Wolaver, J.R. Andrews, C.L. Breton. 2017. Time series analysis of energy production and associated landscape fragmentation in the Eagle Ford shale play. Env. Mgmt. 60:852-866. doi:10.1007/s00267-017-0925-1.


122. Putz, T., J. Fank, and M. Flury, Lysimeters in vadose zone research, Vadose Zone J., 17, 180035, doi:10.2136/vzj2018.02.0035, 2018.


123. Qi, Y., J. Pu, F. Yang, M. K. Shukla, and Q. Chang. 2018. Response of soil physical, chemical and microbial biomass properties to land use changes in fixed desertified land. Catena. 160: 339-344.


124. Qin, C., W. Zhang, B. Yang, X. Chen, K. Xia, and Y. Gao. 2018. DNA facilitates sorption of polycyclic aromatic hydrocarbons on montmorillonites. Environmental Science & Technology, 52(5), 2694–2703. DOI: 10.1021/acs.est.7b05174.


125. Rahamati M et al., 2018. Development and analysis of the Soil Water Infiltration Global database. Earth System Science Data. 10:1237-1263. https://doi.org/10.5194/essd-10-1237-2018


126. Rahmatpour, S., M. R. Mosaddeghi, M. Shirvani, and J. Šimůnek, Transport of silver nanoparticles in intact columns of calcareous soils: The role of flow conditions and soil texture, Geoderma, 322, 89-100, doi: 10.1016/j.geoderma.2018.02.016, 2018.


127. Reyes, J., O. Wendroth, C. Matocha, J. Zhu, W. Ren, and A.D. Karathanasis. 2018. Reliably mapping clay content coregionalized with electrical conductivity. Soil Sci. Soc. Am. J. 82:578-592. doi:10.2136/sssaj2017.09.0327.


128. Rosas-Anderson, P., M.J. Taggart, J.L. Heitman, G.L. Miller, T.R. Sinclair, and T.W. Rufty. 2018. Partitioning between Evaporation and Transpiration from Agrostis stolonifera L. during Light and Dark Periods. Ag. For. Meteor. 260:73-79.


129. Rosolem, C.A., G. Castoldi, L.A. Pivetta and T.E. Ochsner. 2018. Nitrate leaching in soybean rotations without nitrogen fertilizer. Plant Soil 423: 27-40. doi:10.1007/s11104-017-3494-4.


130. Sadeghi, M., E. Babaeian, M. Tuller, and S.B. Jones, 2018. Particle size effects on soil reflectance explained by an analytical radiative transfer model. Remote Sens Environ., 210:375-386, doi: 10.1016/j.rse.2018.03.028.


131. Sadeghi, M., B. Ghanbarian, and R. Horton. 2018. Derivation of an explicit form of the percolation-based effective medium approximation for thermal conductivity of partially saturated soils. Water Resources Research, 54. https://doi.org/10.1002/2017WR021714.


132. Saefuddin, R., H. Saito, and J. Šimůnek, Experimental and numerical evaluation of a ring-shaped emitter for subsurface irrigation, Agricultural Water Management, 211, 111-122, doi: 10.1016/j.agwat.2018.09.039, 2019.


133. Sandoval, E., G. Baldo, N., Núñez, J., Oyarzún, J.P. Fairley, H. Ajami, J.L. Arumí, E. Aguirre, H. Maturana, R. Oyarzún. 2018. A Simple Approach for Groundwater Recharge Assessment in a Rural, Arid, Mid-mountain Basin in North-Central Chile, Hydrological Sciences Journal, https://doi.org/10.1080/02626667.2018.1545095


134. Sasidharan, S., S. A. Bradford, J. Šimůnek, and S. R. Kraemer, Influence of subsurface heterogeneity on drywell recharge, Journal of Hydrology, (accepted December 26 2018).


135. Sasidharan, S., S. A. Bradford, J. Šimůnek, and S. Torkzaban, Minimizing virus transport in porous media by optimizing solid phase inactivation, Journal of Environmental Quality, 47(5), 1058-1067, doi: 10.2134/jeq2018.01.0027, 2018.


136. Sasidharan, S. A. Bradford, J. Šimůnek, B. DeJong, and S. R. Kraemer, Evaluating drywells for stormwater management and enhanced aquifer recharge, Advances in Water Resources, 116, 167-177, doi: 10.1016/j.advwatres.2018.04.003, 2018.


137. Schulze-Makuch, D., et al. A transitory microbial habitat in the hyperarid Atacama Desert, Proc. Natl. Acad. Sci. USA, 115, 2670–2675, 2018.


138. Shang, J., Q. Zhu, and W. Zhang. 2018. Advancing soil physics for securing food, water, soil and ecosystem services. Vadose Zone Journal, 17: 180207. DOI:10.2136/vzj2018.11.0207.


139. Shelia, V., J. Šimůnek, K. Boote, and G. Hoogenbooom, Coupled DSSAT and HYDRUS-1D for simulations of soil water dynamics in the soil-plant-atmosphere system, Journal of Hydrology and Hydromechanics, 66(2), 232-245, doi: 10.1515/johh-2017-0055, 2018.


140. Shen, C., S. A. Bradford, M. Flury, Y. Huang, Z. Wang, and B. Li, DLVO interaction energies for hollow particles: The filling matters, Langmuir, 34, 12764–12775, 2018.


141. Shen, C.Y., Y. Jin, B. Li, E. Ruckenstein, and Y. Huang. 2018. Anomalous attachment behavior of nanoparticles inside nanotubes. Vadose Zone J. 17:180075.  doi:10.2136/vzj2018.04.0075


142. Shin, Y., B.P. Mohanty and A.V.M. Ines, Development of non-parametric evolutionary algorithm for predicting soil moisture dynamics, Journal of Hydrology. 564: 208-221, 2018.


143. Singh, G., N.N. Das, R.K. Panda, A. Colliander, T. Jackson, B.P. Mohanty, D. Entekhabi, and S.Yueh, Validation of SMAP Soil Moisture Products using Ground-based Observations for the Paddy Dominated Tropical Region of India, IEEE Trans. Geoscience and Remote Sensing. Revised.


144. Singh, G., R.K. Panda, and B.P. Mohanty, Spatio-Temporal Analysis of Soil Moisture and Optimal Sampling Design for Regional Scale Soil Moisture Estimation in a Tropical Watershed of India, Water Resources Research. Acceptance Pending Minor Revision.


145. Shuai, X., L. Ma, and O. Wendroth. 2018. Unified Weak and Strong Soil Tests to Estimate Intrinsic Plant Available Phosphorus Pools. Agron. J. 110:859-867, doi:10.2134/agronj2017.11.0650


146. Šimůnek, J., M. Th. van Genuchten, and R. Kodešová, Thematic issue on HYDRUS applications to subsurface flow and contaminant transport problems, Journal of Hydrology and Hydromechanics, 66(2), 129-132, doi: 10.1515/johh-2017-0060, 2018.


147. Šimůnek, J., M. Šejna, and M. Th. van Genuchten, New features of the version 3 of the HYDRUS (2D/3D) computer software package, Journal of Hydrology and Hydromechanics, 66(2), 133-142, doi: 10.1515/johh-2017-0050, 2018.


148. Srivastava, A., J. Q. Wu, W. J. Elliot, E. S. Brooks, D. C. Flanagan, A simulation study to estimate effects of wildfire and forest management on hydrology and sediment in a forested watershed, Northwestern U.S., Trans. ASABE 61, 1579–1601, 2018.


149. Stoy PC (2018) Deforestation intensifies hot days. Nature Climate Change 8(5): 366. DOI: 10.1038/s41558-018-01536.


150. Stoy PC, Peitzsh E, Wood D, Rottinghaus D, Wohlfahrt G, Goulden M, Ward H (2018) On the exchange of sensible and latent heat between the atmosphere and melting snow. Agricultural and Forest Meteorology 252: 167-174. DOI: 10.1016/j.agrformet.2018.01.028.


151. Stoy PC, Ahmed S, Jarchow M, Rashford B, Swanson D, Albeke S, Bromley G, Brookshire ENJ, Dixon M, Haggerty J, Miller P, Peyton B, Royem A, Spangler L, Straub C, Poulter B (2018) Opportunities and tradeoffs among BECCS and the food, water, energy, biodiversity, and social systems nexus at regional scales. Bioscience 68: 100-111, DOI: 10.1093/biosci/bix145.


152. Sun, A. Y., Y. Xia, T. G. Caldwell, and Z. Hao (2018), Patterns of precipitation and soil moisture extremes in Texas, US: A complex network analysis, Adv. Water Resour., 112, 203-213, 10.1016/j.advwatres.2017.12.019.


153. Sviercoski, R.F., Y. Efendiev, and B.P. Mohanty, Upscaling the Coupled Water Flow and Heat Transport in the Shallow Subsurface, Water Resources Research. 54. doi:10.1002/2017WR021490, 2018.


154. Szymkiewicz, A., A. Gumuła-Kawęcka, J. Šimůnek, B. Leterme, S. Beegum, B. Jaworska-Szulc, M. Pruszkowska-Caceres, W. Gorczewska-Langner, R. Angulo-Jaramillo, and D. Jacques, Simulation of freshwater lens recharge and salt/freshwater interfaces using the Hydrus and SWI2 packages for Modflow, Journal of Hydrology and Hydromechanics, 66(2), 246-256, doi: 10.2478/johh-2018-0005, 2018.


155. Tang, Y., L. Marshall, A. Sharma, H. Ajami. 2018. Modelling Precipitation Uncertainties in a Multi-objective Bayesian Ecohydrological Setting, Advances in Water Resources, https://doi.org/10.1016/j.advwatres.2018.10.015


156. Tang ACI, Stoy PC, Hirata R, Musin KK, Aeries EB, Wenceslaus J, Melling L (2018) Eddy covariance measurements of methane flux at a tropical peat forest in Sarawak, Malaysian Borneo. Geophysical Research Letters 45: 4390-4399. DOI: 10.1029/2017GL076457.


157. Thayer, D., A. Parsekian, K. Hyde, H. Speckman, D. Beverly, B. Ewers, M. Covalt, N. Fantello, T. Kelleners, N. Ohara, T. Rogers, W. Holbrook. 2018. Geophysical measurements to determine the hydrologic partitioning of snowmelt on a snow-dominated subalpine hillslope. Water Resources Research 54, doi: 10.1029/2017WR021324.


158. Tian, Z., W. Gao, D. Kool, T. Ren, R. Horton, and J.L. Heitman. 2018. Approaches for estimating soil water retention curves at various bulk densities with the extended van Genuchten model. Water Resour. Res. 10.1029/2018WR022871


159. Tian, Z., D. Kool, T. Ren, R. Horton, and J.L. Heitman. 2018. Determining in-situ unsaturated soil hydraulic conductivity at a fine depth scale with heat pulse and water potential sensors. J. Hydrol. 564:802-810. doi.org/10.1016/j.jhydrol.2018.07.052


160. Tian, Z., Y. Lu, T. Ren, R. Horton, J. L. Heitman. 2018. Improved thermo-time domain reflectometry method for continuous in-situ determination of soil bulk density. Soil & Tillage Research 178:118–129. doi.org/10.1016/j.still.2017.12.021.


161. Triston N. Hooks, Geno A. Picchioni, Brian J. Schutte, Manoj K. Shukla, David L. Daniel, and Jamshid Ashigh.   Salinity an Environmental “Filter” Selecting for Plant Invasiveness?  Evidence from the Indigenous Lepidium alyssoides on Chihuahuan Desert Shrublands.  Rangeland Ecology and Management. 71: 106-114


162. Turek, M.E., R.A. Armindo, O. Wendroth, and I. Dos Santos. 2018. Criteria for the estimation of field capacity and their implications for the bucket type model. Europ. J. Soil Sci. doi: 10.1111/ejss.12747.


163. Wang, D.J., Y. Jin, C.M. Park, J. Heo, X. Bai, N. Aich, and C. Su. 2018. Modeling the Transport of the “New-Horizon” Reduced Graphene Oxide—Metal Oxide Nanohybrids in Water-Saturated Porous Media. Environ. Sci. & Technol., 52 (8), 4610–4622. DOI: 10.1021/acs.est.7b06488.


164. Wang, G, Y Wang, L Liu, Y. Jin, N Zhu, X Li, BG Li, GQ Wang, GW Chen*. 2018. Comprehensive assessment of microbial aggregation characteristics of activated sludge bioreactors using fuzzy clustering analysis. Ecotoxicology and Environmental Safety. 162, 296-303.


165. Wang, Z., S. E. Taylor, P. Sharma, and M. Flury, Poor extraction efficiencies of polystyrene nano- and microplastics from biosolids and soil, PLoS ONE, 13, e0208009, doi.org/10.1371/journal.pone.0208009, 2018.


166. Wang, Z., and M. Flury, Effects of freezing-thawing and wetting-drying on heavy metal leaching from biosolids, Water Environ. Res., 90, DOI: 10.1002/wer.1011, 2018.


167. Wang, Z., C. Luo, T.J. Sauer, M.J. Helmers, L. Xu, and R. Horton. 2018. Canopy chamber measurements of carbon dioxide fluxes in corn and soybean fields. Vadose Zone J. 17:180130. doi:10.2136/vzj2018.07.0130.


168. Wei D, Fuentes JD, Gerken T, Chamecki M, Trowbridge AM, Stoy PC, Katul GG, Fisch G, Acevedo O, Manzi A, von Randow C, Nascimento dos Santos RM (2018) Vegetation phenology contributes to seasonal patterns of isoprene above a rainforest in central Amazonia. Agricultural and Forest Meteorology 256-257: 391-406. DOI: 10.1016/j.agrformet.2018.03.024.


169. Wei, J., W. Zhang, W. Pan, C. Li, and W. Sun. 2018. Experimental and theoretical investigations on Se(IV) and Se(VI) adsorption to UiO-66-based metal-organic frameworks. Environmental Science: Nano, 5, 1441-1453. DOI: 10.1039/C8EN00180D.


170. Wen, M., G. Liu, and R. Horton. 2018. Simplified computational approach for determining in situ probe spacing of a dual probe heat pulse sensor. Soil Sci. Soc. Am. J. 82:1113-1116. doi:10.2136/sssaj2017.11.0402


171. Wen, M., G. Liu, R. Horton, Y. Lu, and T. Ren. 2018. Summary of advances in the heat-pulse technique: improvements in measuring soil thermal properties. Soil Science Society of America Journal 82:5:1016-1016. doi:10.2136/sssaj2018.02.0067


172. Wen, M., G. Liu, R. Horton, and K. Noborio. 2018. An in situ probe‐spacing‐correction thermo‐TDR sensor to measure soil water content accurately. European Journal of Soil Science 69:1030–1034. doi: 10.1111/ejss.12718


173. Wendroth, O. O.B., Zhang, X., Reyes, J., Knott, C. A. (2018). Chapter 11: Irrigation Basics and Principles of an Approach Involving Soil Moisture Measurements, ID-249 - A Comprehensive Guide to Soybean Management in Kentucky (pp. 7) University of Kentucky Agricultural Communications Service. www2.ca.uky.edu/agcomm/pubs/ID/ID249/ID249.pdf


174. Wiesner S, Staudhammer CL, Stoy PC, Boring LR, Starr G (in review) Quantifying energy use efficiency via maximum entropy production: A case study from longleaf pine ecosystems. Biogeosciences Discussions. DOI: 10.5194/bg-2018-322.


175. Winckler J, Reick CH, Luyssaert S, Cescatti A, Stoy PC, Lejeune Q, Raddatz T, Chlond A, Heidkamp M, Pongratz J (in review) Differential response of surface and air temperature to deforestation in climate models. Submitted to Earth System Dynamics Discussions. DOI: 10.5194/esd-2018-66.


176. Wongkaew, A., H. Saito, H. Fujimaki, and J. Šimůnek, Numerical analysis of soil water dynamics in a soil column with an artificial capillary barrier growing leaf vegetables, Soil Use and Management, 34, 206-215, doi: 10.1111/sum.12423, 2018.


177. Wu, C., Huang, J., Zhu, H., Zhang, L., Minasny, B., Marchant, B.P., McBratney, A.B., 2019. Spatial changes in soil chemical properties in an agricultural zone in southeastern China due to land consolidation. Soil and Tillage Research, 187:1522–160.


178. Wu, P., P.-X. Cui, G.-D. Fang, Y. Wang, S.-Q. Wang, D.-M. Zhou, W. Zhang, and Y.-J. Wang. 2018. Biochar decreased the bioavailability of Zn to rice and wheat grains: Insights from microscopic to macroscopic scales. Science of the Total Environment, 621, 160–167. DOI: 10.1016/j.scitotenv.2017.11.236.Xie, X., Y. Lu, T. Ren, and R. Horton. 2018. An empirical model for estimating soil thermal diffusivity from texture, bulk density, and degree of saturation. Journal of Hydrometeorology 19:445-457. DOI: 10.1175/JHM-D-17-0131.1.


179. Yan, J., R. Maneski, B. Vasilas, and Y. Jin. 2018. Mobile colloids and colloidal organic carbon: an underestimated carbon pool in global carbon cycles? Front. Environ. Sci. 6:148, doi: 10.3389/fenvs.2018.00148


180. Yang Li, Jun Lou, Haizhen Wang, Laosheng Wu, and Jianming Xu. 2018. Use of an Improved High-throughput Absolute Abundance Quantification Method to Characterize Soil Bacterial Community and Dynamics. Science of the Total Environment. 633: 360-371.


181. Yang H., T. Du, X. Mao, R. Ding, and M.K. Shukla. 2019. A comprehensive method of evaluating the impact of drought and salt stress on tomato growth and fruit quality. Ag Water Manage. 213: 116-127.


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