01/03/2012

Agrindotana, B.O., Ahonsia, M.O., Domier, L.L., Gray, M.E., Bradley, C.A. 2010. Application of Sequence-Independent Amplification (SIA) for the Identification of RNA Viruses in Bioenergy Crops. Journal of Virological Methods. 169(1):119-128.

Bekal S., Domier, L.L., Niblack, T.L., and Lambert, K.N. 2011. Discovery and initial analysis of novel viral genomes in the soybean cyst nematode. Journal of General Virology 92(8):1870-1879

Damsteegt, V. D., Stone, A. L., Kuhlmann, M., Gildow, F. E., Domier, L. L., Sherman, D. J., Tian, B., and Schneider, W. L. 2011. Acquisition and transmissibility of U.S. Soybean dwarf virus isolates by the soybean aphid, Aphis glycines. Plant Disease 95:945-950.

Domier, L.L., Hobbs, H.A., McCoppin, N.K., Bowen, C.R., Steinlage, T.A., Chang, S., Wang, Y., and Hartman, G.L. 2011. Multiple loci condition seed transmission of Soybean mosaic virus in soybean. Phytopathology 101:750-756.

Richardson, M.L., Lagos, D.M., Mitchell, R.F., Hartman, G.L.,and Voegtlin, D.J. 2011. Life history and morphological plasticity of the soybean aphid, Aphis glycines. Entomol. Experim. Appl. 140: 139-145.

Zhang, C., Bradshaw, J. D., Whitham, S. A., and Hill, J. H. 2010. The development of an efficient multipurpose Bean pod mottle virus viral vector set for foreign gene expression and RNA silencing. Plant Physiol. 153:52-65.

Pandey, A. K., Yang, C., Zhang, C., Graham, M., Horstman, H. D., Lee, Y., Zabotina, O. A., Hill, J. H., Pedley, K. F., and Whitham, S. A. 2011. Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2. MPMI 24:194-206.

Hajimorad, M. R., Wen, R.-H., Eggenberger, A. L., Hill, J. H., and Saghai Maroof, M. A. 2011. Experimental Adaptation of an RNA Virus Mimics Natural Evolution. J. Virol. 85:2557-2564.

Liu, J. Z., Horstman, H. D., Braun, E., Graham, M. A., Zhang, C., Navarre, D., Qiu, W. L., Lee, Y., Nettleton, D., Hill, J. H., and Whitham, S. A. 2011. Soybean homologs of MPK4 negatively regulate defense responses and positively regulate growth and development. Plant Physiol. In press. doi: 10.1104/pp.111.185686

Pandey, A. K., Yang, C., Zhang, C., Graham, M. A., Horstman, H. D., Lee, Y., Zabotina, O. A., Hill, J. H., Pedley, K. F., and Whitham, S. A. 2011. Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2. Mol. Plant Microbe Interact. 24: 194206. doi: 10.1094/MPMI-08-10-0187 (Highlighted as the Editors Pick for the February 2011 issue of Mol. Plant Microbe Interactions)

Bradshaw, J. D., Zhang, C., Hill, J. H., and Rice, M. E. 2011. Landscape epidemiology of Bean pod mottle comovirus: Molecular evidence of heterogeneous sources. Arch Virol. 156:1615-1619.

He, B., Hill, J. H., and Hajimorad, M. R. 2011. Factors to improve detection of Alfalfa mosaic virus in soybean. Online. Plant Health Progress doi: 10.1094/PHP-2010-0926-02-RS.

Haidi, B., Bradshaw, J., Rice, M., and Hill, J. Bean leaf beetle (Coleoptera:Chrysomelidae) and Bean pod mottle virus in soybean: Biology, ecology, and management. Journal of Integrated Pest Management. In press.

Zhang, C., Whitham, S. A., Hill, J. H. 2011. Virus-induced gene silencing in soybean and common bean. In Methods in Molecular Biology. Edited by A. Becker. Humana Press, Totowa, NJ. In press.

Pandey, A. K., Yang, C., Zhang, C., Pedley, K. F., Graham, M., Hill, J. H., and Whitham, S. A. 2010. Identification of soybean genes that contributes to Rpp2-mediated defense against Asian soybean rust using VIGS. Phytopathology 100:S96.

Pedley, K. F., Pandey, A. I., Kendrick, M. D., Zhang, C., Graham, M. A., Whitham, S. A., and Hill, J. H. 2011. Functional analysis of Asian soybean rust resistance pathways using virus-induced gene silencing. Phytopathology 101:S139.

Pandey, A. K., Yang, C., Zhang, C., Graham, M. A., Hill, J. H., Pedley, K. F., and Whitham, S. A. 2011. Functional analysis of the Rpp2-mediated Asian soybean rust disease resistance pathway. American Society of Plant Biologists. Abs. # 19057. http://abstracts.aspb.org/pb2011/public/P19/P19057.html

Diaz-Camino C, Annamalai P, Sanchez F, Kachroo A, Ghabrial SA. 2011. An effective virus-based gene silencing method for functional genomics studies in common bean. Plant Methods 2011, 7:16.

Singh AK, Fu DQ, El-Habbak M, Navarre D, Ghabrial S, Kachroo A. 2011. Silencing genes encoding omega-3 fatty acid desaturase alters seed size and accumulation of Bean pod mottle virus in soybean. Mol Plant Microbe Interact, 24:506-515.

Soria-Guerra, R. E., Rosales-Mendoza, S., Chang, S., Haudenshield, J. S., Rao, S. S., Hartman, G. L., Ghabrial, S. A. and Korban, S. S. 2010. Identifying differentially expressed genes in leaves of Glycine tomentella in the presence of the fungal pathogen Phakopsora pachyrhizi. Planta 232:11811189

Soria-Guerra, R. E., Rosales-Mendoza, S., Chang, S., Haudenshield, J. S., Annamalai, P., Rodriguez-Zas, S., Hartman, G. L., Ghabrial, S. A. and Korban, S. S. 2010. Transcriptome analysis of resistant and susceptible genotypes of Glycine tomentella during Phakopsora pachyrhizi infection reveals novel rust resistance genes. Theor. Appl. Genet. 120, 1315-1333.

McDonald, M., Kendall, A., Bian, W., McCullough, I, Lio, E., Havens, W. M., Ghabrial, S. A., Stubbs, G. 2010. Architecture of the potyviruses. Virology 405, 309-313.

Jun, Tae-Hwan, M.A. Rouf Mian and Andrew P. Michel. 2011. Genetic mapping revealed two loci for soybean aphid resistance in PI 567301B. Theor. Appl. Genet. (In press).

Xiuchun Zhang, Shirley Sato, Xiaohong Ye, Anne E. Dorrance, T. Jack Morris, Thomas E. Clemente, and Feng Qu. 2011. Robust RNAi-based resistance to mixed infection of three viruses in soybean plants expressing separate short hairpins from a single transgene. Phytopathology (in press).

05/31/2013

Zhang, X., Sato, S.. Ye, X., Dorrance, A. E., Morris, T. J., Clemente, T. E., and Qu, F. 2011. Robust RNAi-based resistance to mixed infection of three viruses in soybean plants expressing separate short hairpins from a single transgene. Phytopathology 101, 1264-1269.

Han, J., Domier, L. L., Dorrance, A. E., and Qu, F. (2012). Complete genome sequence of a novel pararetrovirus isolated from soybean. Journal of Virology 86, 9555.

Nam, M., Koh, S., Kim, S. U., Domier, L. L., Jeon, J. H., Kim, H. G., Lee, S. H., Bent, A. F., and Moon, J. S. 2011. Arabidopsis TTR1 causes LRR-dependent lethal systemic necrosis, rather than systemic acquired resistance, to Tobacco ringspot virus. Molec. Cells 32(5), 421-429.

Han. J., Domier, L. L., Dorrance, A., and Qu, F. 2012.Complete genome sequence of a novel pararetrovirus isolated from soybean. J. Virol. 86(17), 9555.

Hill, C. B., Chirumamilla, A. and Hartman, G. L. 2012. Resistance and virulence in the soybean-Aphis glycines interaction Euphytica 186: 635-646.

Hobbs, H.A., Domier, L. L. and Nelson, B. D. 2012.First Report of Alfalfa mosaic virus and Soybean dwarf virus on Soybean in North Dakota. Plant Dis. doi:10.1094/PDIS-07-12-0673-PDN.

Hobbs, H. A., Jossey, S., Wang, Y., Hartman, G. L., and Domier, L. L. 2012.Diverse soybean accessions identified with temperature-sensitive resistance to Tobacco streak virus. Crop Sci. 52(2), 738-744.

Lim, H. S., Jang, C. Y., Nam, J., Li, M., Hong, J. S., Bae, H., Ju, H. J., Kim, H. G., Ford, R. E., and Domier, L. L. 2012. Characterization of the in vitro activities of the P1 and helper component proteases of Soybean mosaic virus strain G2 and Tobacco vein mottling virus. Plant Pathol. J. 28(2), 197-201.

McClellan, M. S., Domier, L. L., and Bailey, R. C. 2012. Label-free virus detection using silicon photonic microring resonators. Biosen. Bioelec. 31(1), 388-392.

Pandey, A. K., Yang, C., Zhang, C., Graham, M., Horstman, H. D., Lee, Y., Zabotina, O. A., Hill, J. H., Pedley, K. F., and Whitham, S. A. 2011. Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2. MPMI 24:194-206.

Hajimorad, M. R., Wen, R.-H., Eggenberger, A. L., Hill, J. H., and Saghai Maroof, M. A. 2011. ExperimentalAdaptation of an RNA Virus Mimics Natural Evolution. J. Virol. 85:2557-2564.

Pandey, A. K., Yang, C., Zhang, C., Graham, M. A., Horstman, H. D., Lee, Y., Zabotina, O. A., Hill, J. H., Pedley, K. F., and Whitham, S. A. 2011. Functional analysis of the Asian soybean rust resistance pathway mediated by Rpp2. Mol. Plant Microbe Interact. 24: 194206.

Bradshaw, J. D., Zhang, C., Hill, J. H., and Rice, M. E. 2011. Landscape epidemiology of Bean pod mottle comovirus: Molecular evidence of heterogeneous sources. Arch Virol. 156:1615-1619.

He, B., Hill, J. H., and Hajimorad, M. R. 2011. Factors to improve detection of Alfalfa mosaic virus in soybean. Online. Plant Health Progress doi: 10.1094/PHP-2010-0926-02-RS.

Chowda-Reddy, R. V., Sun, H., Hill, J., Poysa, V., and Wang, A. 2011. Simultaneous mutations in multi-viral proteins are required for an avirulent Soybean mosaic virus isolate to gain virulence n Rsv1-, Rsv3-, and Rsv4-genotype soybeans. PloS ONE 6(11): e28342. doi:10.1371/journal.pone.00283

Haidi, B., Bradshaw, J., Rice, M., and Hill, J. 2012. Bean leaf beetle (Coleoptera:Chrysomelidae) and Bean pod mottle virus in soybean: Biology, ecology, and management. Journal of Integrated Pest Management. DOI: http://dx.doi.org/10.1603/IPM11007

Liu, J-Z., Horstman, H. D., Braun, E., Graham, M. A., Zhang, C., Navarre, D., Qiu, W-L., Lee, Y., Nettleton, D., Hill, J. H., and Whitham, S. A. 2011. Soybean homologs of MPK4 negatively regulate defense responses and positively regulate growth and development. Plant Physiology 157:1363-1378.

Zhang, C., Grosic, S., Whitham, S. A., and Hill, J. H. 2012. The Requirement of Multiple Defense Genes in Soybean Rsv1Mediated Extreme Resistance to Soybean mosaic virus. Molecular Plant Microbe Interact. 25:1307-1313.

Juvale, P. S., Hewezi, T., Zhang, C., Kandoth, P. K., Mitchum, M. G., Hill, J. H., Whitham, S. A., and Baum, T. J. 20112. Temporal and spatial Bean pod mottle virus-induced gene silencing in soybean. Journal of Molecular Plant Pathology. DOI: 10.1111/J.1364-3703.2012.00808.X

Liu, S., Kandoth, P. K., Warren, S. D., Yeckel, G., Heinz, R., Alden, J., Yang, C., Aziz, J., El-Mellouki, T., Juvale, P. S., Hill, J., Baum, T. J., Cianzio, S., Whitham, S. A., Korkin, D., Mitchum, M., and Meksem, K. 2012. A soybean cyst nematode resistance gene points to a new mechanism of plant resistance to pathogens. Nature. DOI:10.1038/nature11651

Khatabi, B., Wen, R.-H., Hershman, D. E., Kennedy, B. S., Newman, M. A., and Hajimorad, M. R. 2012. Generation of polyclonal antibodies and serological analyses of nucleocapsid protein of Soybean vein necrosis-associated virus: A distinct soybean infecting tospovirus serotype. European Journal of Plant Pathology 133, 783-790.

Khatabi, B., He, B., and Hajimorad, M. R. 2012. Diagnostic potential of polyclonal antibodies against bacterially expressed recombinant coat protein of Alfalfa mosaic virus in soybean. Plant Disease 96, 1352-1357.

Khatabi, B., Fajolu, O. L., Wen, R.-H., and Hajimorad, M. R. 2012. Evaluation of North American isolates of Soybean mosaic virus for gain of virulence on Rsv-genotype soybeans with special emphasis on resistance-breaking determinants on Rsv4. Molecular Plant Pathology 13, 1077-1088.

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