WDC12: Integrating Access to Information from Herbaria

(Multistate Research Coordinating Committee and Information Exchange Group)

Status: Inactive/Terminating

SAES-422 Reports

Annual/Termination Reports:

[09/21/2008] [08/31/2009]

Date of Annual Report: 09/21/2008

Report Information

Annual Meeting Dates: 07/26/2008 - 07/31/2008
Period the Report Covers: 10/01/2007 - 09/01/2008

Participants

Murrell, Zack;murrellze@appstate.edu;Appalachia State University;
Neill, Amanda;aneill@brit.org;Botanical Research Institute of Texas;
Best, Jason;jbest@brit.org;Botanical Research Institute of Texas;
Trock, Debra;dtrock@calacademy.org;California Academy of Sciences;
Blair, Charles E.;blairc@verizon.net;California Polytechnic, San Luis Obispo;
Simmons, Mark;psimmons@lamar.colostate.edu;Colorado State University;
Wu, Wenying;wuw@si.edu;Dept. of Paleobiology, Smithsonian Institution;
Hannan, Gary L.;ghannan@emich.edu;Eastern Michigan;
Woodbury, Lynka;lwoodbury@fairchildgarden.org;Fairchild Tropical Garden;
Morin, Nancy;nancy.morin@nau.edu;Flora of North America;
Schmidt, Heidi;heidi.schmidt@mobot.org;Flora of North America, Missouri Botanical Garden;
Pinzl, Ann;apinzl@sbcglobal.net;Formerly Nevada State Museum;
Fortunato, Renee H.;rfortunato@cnia.inta.gov.ar;Inst. Recursos Biologicos, INTA;
Mayfield, Mark;markherb@ksu.edu;Kansas State University;
Prather, Alan;alan@msu.edu;Michigan State University;
Hardy, Chris;christopher.hardy@millersville.edu;Millersville University, Lancaster, Pennsylvania;
Hardy, Nazli;nazli.hardy@millersville.edu;Millersville University, Lancaster, Pennsylvania;
Solomon, James;jim.solomon@mobot.org;Missouri Botanical Garden;
Miller, Chuck;chuck.miller@mobot.org;Missouri Botanical Garden;
Stevenson, Jan;jstevenson@nybg.org;New York Botanical Garden;
Krings, Alexander;Alexander_krings@ncsu.edu;North Carolina State University;
Liston, Aaron;listona@science.oregonstate.edu;Oregon State University;
Parks, Matthew;parksma@science.oregonstate.edu;Oregon State University;
Cherniawsk, Donna;donna.cherniawsky@gov.ab.ca;Royal Alberta Museum, Edmonton, Alberta;
Struwe, Lena;struwe@aesop.rutgers.edu;Rutgers University;
Giddens, Michael;mikegiddens@silverbiology.com;SilverBiology;
Poston, Muriel;mposton@skidmore.edu;Skidmore College;
Guala, Stinger;stinger@stingersplace.com;U.S.D.A.;
Ickert-Bond, Steffi;ffsi1@uaf.edu;University of Alaska;
Jenkins, Philip;pjenkins@email.arizona.edu;University of Arizona;
Starbuck, Tom;tjstarbuck@ucdavis.edu;University of California - Davis;
Dean, Ellen;eadean@ucdavis.edu;University of California - Davis;
Cellinese, Nico;ncellinese@flmnh.ufl.edu;University of Florida;
Yashinaga, Alvin;alviny@hawaii.edu;University of Hawaii - Manoa;
Rabeler, Rich;rabeler@umich.edu;University of Michigan;
Sullivan, Janet R.;janets@cisunix.unh.edu;University of New Hampshire;
Elisens, Wayne;elisens@ou.eou;University of Oklahoma;
Gil-de-Rub, Pedro;pedro.d.gil@uprp.edu;University of Puerto Rico;
Martinez, Nirzka M.;nirzk@yahoo.com;University of Puerto Rico;
Cameron, Ken;kmcameron@wisc.edu;University of Wisconsin - Madison;
Pollock, Jennifer;japollock@usgs.gov;US Geological Survey;
Ford-Werntz, Donna;dford2@wvu.edu;West Virginia University;
Dobson, Heidi;dobsonhe@whitman.edu;Whitman College;
Barkworth, Mary;mary@biology.usu.edu;Utah State University;

Brief Summary of Minutes

Summary of the USVH Open Meeting, July 31, 2008


held in conjunction with Botany 2008 at the University of British Columbia


Chair: Mary Barkworth


Others: Aaron Liston, Mary Mayfield, Zack Murrell, Jenn Pollock (all members of the USVH steering committee); 43 other individuals, representing 35 different institutions/agencies/companies.


Barkworth opened by summarizing the background to the meeting and announcing that the Council of the American Society of Plant Taxonomists had formally endorsed the goal of seeking to make development of a national virtual herbarium (USVH) for the United States a formal project under the auspices of the Agricultural Experiment Station system. USVH will provide a single portal for accessing information in all the nations herbaria and will be built on, and in collaboration with, existing and developing regional herbarium networks.


Some of the reasons cited for developing USVH:


" To stress the importance of collections as sources of information


" To facilitate sharing and integrating information from multiple herbaria


" To help those working in herbaria


Some individuals commented that stakeholders, those whom we think would want to use herbarium information, should have been present. It was explained that, in the view of the committee, the most important step was to ensure that the herbarium community was supportive of the project. This was the function of the present meeting, and the multiple presentations during the week. Nevertheless, it is important that we understand the needs of our potential users, which means that we should invite them to participate in discussions once the initial organizational aspects have been addressed.


In discussion of priorities, several speakers emphasized that the greatest need was support for data entry. Different methods of increasing the efficiency of data entry were discussed. It was soon evident that herbaria differ substantially in non-financial resources that they can draw on. Consequently, finding multiple approaches to any problem is desirable.


It was suggested that all herbaria should focus on entering all their US specimens of 2-3 taxa that might be of general interest, e.g, a weed, a widespread native species, and a species with ornamental potential. The species selected should also be easy to identify and have an uncomplicated nomenclatural history.


The importance of working with existing initiatives, such as the Biodiversity Collections Index and TROPICOS, was emphasized. The Missouri Botanical Garden has agreed to support the project by facilitating of TROPICOS as an authoritative source of names for North American plants.


It was emphasized that USVH will be developed by collaboration, collaboration with the regional networks, with other initiatives, and among those who work in herbaria.


The implications of being a project within the Agricultural Experiment Station system were discussed. The financial implications, other than the possibility of one person per state receiving support to attend the annual meeting, were not known. It was pointed out that the linkage had already served to make more AES directors aware of herbaria and that also brought herbaria to the attention of the Extension Service, two groups with extensive experience in projects with national scope. The involvement of NBII was also proving mutually beneficial. Barkworth also commented that all herbaria should continue their own efforts to obtain funding, that the USVH project would assist in any way it could, but it might be more through workshops on best practices and information to support applications for funding rather than through direct funding of data entry.


For the second part of the meeting, the participants were asked to discuss what the priorities should be for the first year. The following are some of the activities presented:


" Develop a means, such as a Wiki, for discussing ideas and setting goals between meetings.


" Regional consortia should take responsibility for locating all the herbaria within their region, including those not listed in Index Herbariorum.


" Consider developing a basic portal using information already being made available to NBII.


" Demonstrate the power of pooling our data, by asking herbaria to enter all their records of 2-3 taxa that a) are rarely misidentified, b) have not been subject to many name changes, and c) would be of interest to potential user groups such as an invasive weed and a rare plant.


" Set up a Web site that shows progress in databasing a few weedy taxa so that the public and media could follow the progress, not only of databasing but also of the spread of a weed.


" Develop mechanisms for sharing best practices for efficient digitization of specimens.


" Provide a Web site that shows our progress in identifying the number of herbaria in the US and their status with respect to databasing, imaging, and information sharing.


There were many lively discussions during the meeting, which eventually adjourned around 12.30 pm.


Accomplishments

Goal: Secure support of those responsible for the nations herbaria in collaborative development of a national portal/Web site for providing integrated access to information in the nations herbaria.<p> <br /> 1. Requested formal endorsement of the American Society of Plant Taxonomists (ASPT) for pursuing collaborative development of a national virtual herbarium within the framework of the Agriculture Experiment Station System. Request approved.<p><br /> 2. Sponsored a meeting with those engaged in developing regional herbarium networks and those involved in major projects with which the USVH project needs to engage. In preparing for this meeting, and at the meeting itself, the role of the USVH Coordinating Committee relative to other initiatives was clarified and the support of other organizations for development of USVH was secured. One of the reasons for this meeting was to emphasize that the goal of the USVH was to promote collaboration, not to duplicate existing work. Report posted.<p><br /> 3. Sponsored an open meeting in conjunction with the annual meeting of the ASPT and Botanical Society of American (BSA) that was attended by 44 individuals. At this meeting, input was requested, and received, concerning short term and long term goals for the project. Major concerns were securing funding for data entry and providing clear, practical assistance in implementing best practices in data entry. It was emphasized that herbaria and consortia should continue to pursue their own funding resources, that the function of the USVH committee was to promote collaboration, sharing, and seeking funding for aspects that would have wide benefits. Report posted.<p><br /> 4. Requested Peter Raven's support, as President of the Missouri Botanical Garden (MBG), of the project and linkage to TROPICOS, the nomenclatural resource developed by MBG. Although intended primarily for internal use, because of MBGs active and widespread collecting program, TROPICOS is now the best available nomenclatural resource for those working with plants. Expressed agreement in principal. <p><br /> 5. In response to a suggestion made at the open meeting, Christopher Hardy,(Minersville University of Pennsylvania) established a Wiki site for USVH. <p><br /> 6. Jason Best (Botanical Research Institute of Texas) established a RedMine site for managing the USVH project on a server of the Botanical Research Institute of Texas. <p><br /> 7. Jenn Pollock, NBII, created a preliminary Web site for USVH on the NBII site. This Web site will be opened once we have a) a map showing where US herbaria are located, which are databasing, and which are sharing data and b) a Web interface for deploying, in an attractive and effective manner, USVH information. There are already several herbaria that are providing information to NBII that can be used; the need is for an attractive, fast, intuitive search tool. <p><br />

Publications

Impact Statements

  1. Obtained formal support from those responsible for the nations herbaria to organize a collaobrative approach to formation of a single portal to information in US herbaria, to be known as USVH. Some individuals were able to obtain support from their AES Director to attend the open meeting at which the approach for creating USVH was outlined; many others attended despite not having the support.
  2. More AES Directors, both in the western region and outside it, were made aware of the efforts herbarium personnel are making to make their resources widely and freely accessible.
  3. The critical areas for making USVH a reality were identified. These include disseminating information on best practices in data entry, data clean up, and data integration.
  4. Initiated development of a survey that will make tracking progress in building USVH straightforward.
  5. Agreed to work with regional networks in developing USVH, thereby strengthening regional initiatives in plant systematics.
  6. Initiated formation of an implementation committee to identify needs and costs.
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Date of Annual Report: 08/31/2009

Report Information

Annual Meeting Dates: 07/26/2009 - 07/26/2009
Period the Report Covers: 10/01/2008 - 09/30/2009

Participants

Brief Summary of Minutes

Accomplishments

1. Approval of the formation of a five year coordinating committee. This will enable the project to build on the momentum developed to date. <br /> <br /> 2. Expansion of the initial organizing committee to include three individuals with knowledge and experience in relevant areas of information technology as well as herbaria. These individuals are providing the organizing committee with valuable insights.<br /> <br /> 3. Identification of two contacts for each of the regional networks, including networks still in development. This has encouraged formalization of some networks and facilitates sharing information with all the networks and, through the networks, to individual herbaria.<br /> <br /> 4. Increased interaction with the National Biodiversity Information Infrastructure program which manages the US node of the Global Biodiversity Information Facility. Close interaction with NBII is important because an important aspect of USVH is making herbarium records available. At the same time, NBII can also help publicize many of the other resources, including checklists, government reports, and online keys, to which botanists frequently contribute.<br /> <br /> 5. Organized presentations for the annual meeting that addressed questions concerning imaging and use of OCR technology that were raised at the 2008 meeting. <br /> <br /> 6. Initiated development of a proposal for NSF funding of a workshop to create a detailed estimate of the procedures, needs, and costs of creating USVH. Formed an advisory group to aid in the preparation of this proposal.<br /> <br /> The USVH project is built on, and contributes to, a growing interest on the part of herbarium curators in making their collections available via the Internet and growing recognition on the part of professionals in many disciplines, including those who advise policy makers, of the value of the information that can be derived from herbarium specimens. Consequently, credit for some of the impacts described above is shared with others, and with individuals who have been working to develop regional networks since before the project began. Nevertheless, several individuals attending the three-day annual meeting of the Botanical Society of America, which followed the USVH annual meeting, complimented the USVH organizing committee on their work and stated that they now felt optimistic about developing a national network in the near future. In some instances, they commented that what they had learned at the annual meeting and through discussions on herbaria had helped them in moving digitization of their own collection forward. <br />

Publications

None

Impact Statements

  1. Sponsorship by WAAESD has led an increase in contact between herbarium curators and Agricultural Experiment Station Directors, particularly in the many states where there is no direct connection between the Agricultural Experiment Station and herbaria. This has expanded recognition of the potential value of herbaria to agriculture.
  2. The USVH project has drawn attention to the wide range of herbaria in the country and helped encourage inclusion of all herbaria in the national network, including the small herbaria at regional colleges. This in turn will encourage their students to view their efforts as an integral part of a national and global effort, rather than a local initiative.
  3. The discussions at the annual meeting have helped disseminate information about new and effective approaches to imaging and databasing  and identify some that are not as effective as was anticipated. They have also helped clarify additional developments that will increase the efficiency of herbarium operations, including both digitization of past collections and accessioning of new collections.
  4. Initiation of a proposal to the National Science Foundation for a workshop, to be held in late January or early February, for development of a plan for creating USVH, including an assessment of the cost involved of doing so  and of not doing so.
  5. A significant change that benefits the project is that, for 2009, the Biological Research Collections Panel of the National Science Foundation explicitly encouraged development of collections networks, setting a maximum of $2,000,000 for such proposals rather than the $500,000 allowed individual collections. An informal count suggests that herbaria have been involved in at least 15 different submissions to the panel. Although most will not be funded, preparation of the proposals has undoubtedly helped the herbaria involved identify their needs  and possibly areas in which they can make some small steps towards their goal without additional funding. This is something that impacts the USVH project rather than the other way around.
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