SAES-422 Multistate Research Activity Accomplishments Report

Status: Approved

Basic Information

Participants

S-009 Members Present: Administrative Advisor (University of Georgia) Bob Stougaard, bob.stougaard@uga.edu Alabama (Auburn University) Charles Chen, cyc0002@auburn.edu Georgia (University of Georgia) Soraya Bertioli, sbertioli@uga.edu (Secretary) Kentucky (University of Kentucky) Tim Phillips, tphillip@uky.edu Mississippi (Mississippi State University) Brian Baldwin bsb2@pss.msstate.edu North Carolina (North Carolina State University) Carlos Iglesias, caiglesi@ncsu.edu Oklahoma (Oklahoma State University) Yanqi Wu, yanqi.wu@okstate.edu Puerto Rico (University Puerto Rico) Carlos Flores, carlos.flores3@upr.edu South Carolina (Clemson University) Rick Boyles, rboyles@clemson.edu Tennessee (University of Tennessee) Virginia Sykes, vsykes@utk.edu (Chair) Texas (Texas AgriLife Research) John Cason, j-cason@tamu.edu Plant Genetic Resources Conservation Unit Members Present: Melanie Harrison, melanie.harrison@usda.gov Shyam Tallury, shyam.tallury@usda.gov Ming Li Wang, mingli.wang@usda.gov Tiffany Field, tiffany.fields@usda.gov Brad Morris, brad.morris@usda.gov Bob Jarret, bob.jarret@usda.edu Nicholas Stigura, nicholas.stigura@usda.gov Brandon Tonnis, brandon.tonnis@usda.gov Other Attendees Peter Bretting (USDA, National Program Leader), peter.bretting@usda.gov Stephen Kresovich (National Genetic Resources Advisory Council), skresov@clemson.edu

Accomplishments

A large and highly diverse set of plant germplasm was preserved and distributed to scientists, educators, and plant breeders. A total of 102,245 accessions of 1602 plant species representing 25 genera were maintained in the Griffin plant genetic resources collection. Over 86% of these accessions were available for distribution to users and over 94.5% were backed up for security at a second location. A total of 16,275 seed and clonal accessions were distributed upon request to scientists and educators worldwide between October 1, 2020 and July 14, 2021. Sorghum, cowpea, watermelon, and sesame were the most distributed crops. Clonal collections were continually maintained and distributed to stakeholders. Clonal collections include warm-season grasses, bamboo, Chinese water chestnut, perennial peanut, and sweet potato. Preservation methods include tissue culture, field plots, greenhouse plants, and hydroponics. Fifteen accessions of sweet potato were sent to USDA-ARS, Fort Collins, CO for cryopreservation. These activities ensure that the crop genetic resources at the Griffin location are safeguarded for future use to develop new cultivars and identify novel traits and uses in our food and fiber crops.

Although on site regeneration were greatly reduced at the beginning of 2020, late season plantings and collaborator regenerations led to successful regeneration of many crops including wild peanut (Griffin, GA), sorghum and millet (USDA-ARS, Puerto Rico) and vegetable crops (USDA,ARS, Parlier, CA; Rijk Zwaan; Vilmoran; HM Clause; Curry Seed and Chile Company and the World Vegetable Center). This season, regenerations planted include vegetables (605), peanut (639), miscellaneous crops (11), industrial crops (52), legumes (47), clover (26), grasses (39) and okra (70). Of these, 86 wild peanuts (35 different species) were planted in the greenhouses for replenishment of fresh seeds while 435 cultivated peanuts and 154 cowpeas were planted in field plots for regenerations Georgia. Another 50 cowpeas were sent for regeneration in St. Croix.

A collaborative research project with Texas and A&M University and Texas Tech University on drought tolerance in peanut was completed. Over two crop seasons, twelve interspecific hybrid derived germplasm lines from the national peanut collection along with three peanut cultivars as controls were evaluated under a rainout shelter for drought in Griffin. None of them performed better than the cultivated control peanuts for overall drought tolerance. New funding was obtained from the National Plant Disease Recovery System for a collaborative project with the University of Georgia-Tifton to develop molecular diagnostic tools for the detection of peanut clump virus and the Indian peanut clump virus. These diagnostic tools are needed to screen new peanut germplasm entering the country. With partial support from the National Peanut Board, a new collaborative research project was initiated with USDA, ARS, Stoneville, MS, bioinformatics laboratory and the Hudson Alpha Institute, Huntsville, AL, to analyze the wild peanut genome. Increased knowledge of the wild peanut genome will enable peanut breeders to more efficiently cross wild peanut with cultivated peanut. This allows new peanut varieties to be developed with desirable traits originally found in the wild peanut.

Collaboration continues with USDA,ARS, Charleston, SC to cross wild species related to watermelon with cultivated watermelon species. Wild species provide a unique source of important traits for introduction into cultivated crop species. Large portions of the pepper collection were screened for the presence of Tobamoviruses (ToBRFV) and pospiviroids. The presence of viruses or the lack of knowledge concerning the presence or absence of viruses in germplasm hinders the ability to distribute germplasm and can result in the unintentional distribution of plant pathogens. Collaborative studies continue with Baylor College of Medicine to use Next Genome Sequencing to define genetic relationships in pepper and to examine evolution in wild pepper species. Information gained will help plant breeders more efficiently make crosses between cultivated and wild pepper with hopes of bringing new traits into the crop. Collaborative efforts to identify and characterize novel uses of capsinoids in pepper are on- going. Capsinoids, the substance that gives peppers their hot pungent flavor, has been shown to be an important nutraceutical compound with many potential health benefits.

A nutraceutical and health forage evaluation of several Desmodium species was completed in collaboration with Ft. Valley State University. Crude protein levels averaged 23% in two Desmodium species and all Desmodium species had in vitro true digestibility ranging from 80-87%. There were species differences in flavonoid content and high protein precipitable phenolics as well as high total phenolics in one of the species. This encourages the potential use of these Desmoidum species for nutraceutical livestock forages.

In collaboration with Tuskegee University, 580 individual peanut seeds were analyzed for fatty acid composition. The overall project goal is to develop genetic tools for peanut breeders to increase the level of the healthy fat, oleic acid, in peanut seeds. With University of Florida collaborators, six peanut lines were measured for protein content as the first step to identify genes for nitrogen-fixation by peanut root nodulation. In collaboration with USDA-ARS, Tifton, GA, 23 breeding lines were analyzed for fatty acid composition. The aim of the project is to develop new peanut cultivars with both improved disease resistance and seed nutrition quality. A total of 50 peanut samples were measured for protein content, oil content, fatty acid composition, and sugar content as part of a joint seed sprout project with the University of Georgia. The goal of the project is to develop peanut varieties with improved nutritional properties in sprouted product used for human consumption. Additionally, 18 germplasm accessions (3 accessions x 6 botanical varieties) were planted for two years (2019 and 2020) with two replicates. Protein content, oil content and fatty acid composition were measured in these samples. Flavor components will also be measured. The goal is to detect genetic variation in flavors among the botanical varieties and provide useful genetic materials to breeders for development of peanut varieties.

Impacts

Publications

Peer-Reviewed Publications

Aryal, P., and L.E. Sollenberger. 2021. Growth temperature and rhizome propagule characteristics affect rhizoma peanut shoot emergence and biomass partitioning. Agron. J. 113:335–344. https://doi.org/10.1002/agj2.20486

Aryal, P., L.E. Sollenberger, M.M. Kohmann, L.S. da Silva, K.D. Cooley, and J.C.B. Dubeux, Jr. 2021. Plant growth habit and nitrogen fertilizer effects on rhizoma peanut biomass partitioning during establishment. Grass and Forage Sci. (in press). http://dx.doi.org/10.1111/gfs.12519

Aryal, P., L.E. Sollenberger, M.M. Kohmann, L.S. da Silva, E.M. Shepard, K.D. Cooley, D.L. Rowland, and J.C.B. Dubeux, Jr. 2020. Rhizoma peanut genotype and planting date affect biomass allocation patterns and establishment performance. Crop Sci. 60:1690–1701. https://dx.doi.org/10.1002/csc2.20142

Ballén‐Taborda C, Chu Y, Ozias‐Akins P, Timper P, Jackson SA, Bertioli DJ and Leal‐Bertioli SCM. 2021. Validation of resistance to root‐knot nematode incorporated in peanut from the wild relative Arachis stenosperma. Agronomy Journal. https://doi.org/10.1002/agj2.20654

Basak, S., McElroy, J., Brown, A., Gonçalves, C., Patel, J., & McCullough, P. 2020. Plastidic ACCase Ile-1781-Leu is present in pinoxaden-resistant southern crabgrass (Digitaria ciliaris). Weed Science, 68(1), 41-50. doi:10.1017/wsc.2019.56

Billman, Eric D., Jesse I. Morrison, and Brian S. Baldwin. 2020. Breeding a heat-tolerant annual ryegrass for earlier fall planting in the southeastern United States. Crop Sci. 60(2):830-840. http://dx.doi.org/10.1002/csc2.20078

Boatwright, J.L., Brenton, Z.W., Boyles, R.E., Sapkota, S., Myers, M.T., Jordan, K.E., Dale, S.M., Shakoor, N., Cooper, E.A., Morris, G.P. and Kresovich, S. 2021. Genetic characterization of a Sorghum bicolor multiparent mapping population emphasizing carbon-partitioning dynamics. G3: Genes | Genomes | Genetics 11:p.jkab060.

Bock, C.H., Alarcon, Y., Conner, P.J. et al. 2020. Foliage and fruit susceptibility of a pecan provenance collection to scab, caused by Venturia effusa. CABI Agric Biosci 1, 19. https://doi.org/10.1186/s43170- 020-00020-9

Boyd, A., McElroy, J., McCurdy, J., McCullough, P., Han, D., & Guertal, E. 2021. Reducing topramezone injury to bermudagrass using chelated iron and other additives. Weed Technology, 35(2), 289-296. doi:10.1017/wet.2020.110

Brenton, Z.W., Juengst, B.T., Cooper, E.A., Myers, M.T., Jordan, K.E., Dale, S.M., Glaubitz, J.C., Wang, X., Boyles, R. E., Connolly, E. L., Kresovich, S. 2020. Species-specific duplication event associated with elevated levels of nonstructural carbohydrates in Sorghum bicolor. G3: Genes | Genomes | Genetics 10:1511-1520.

Che, P., Chang, S., Simon, M.K., Zhang, Z., Shaharyar, A., Ourada, J., O’Neill, D., Torres-Mendoza, M., Guo, Y., Marasigan, K.M., Vielle-Calzada, J.-P., Ozias-Akins, P., Albertsen, M.C. and Jones, T.J. 2021. Developing a rapid and highly efficient cowpea regeneration, transformation and genome editing system using embryonic axis explants. Plant J, 106: 817-830. https://doi.org/10.1111/tpj.15202

Chhetri, M., C. Fontanier, J.Q. Moss, and Y.Q. Wu. 2021. Effect of combined shade and drought stress on bermudagrass turf. International Turfgrass Society Research Journal. 1-11. DOI:10.1002/its2.68.

Chu Y, David Bertioli, Chandler M Levinson, H Thomas Stalker, C Corley Holbrook, Peggy Ozias- Akins. 2020. Homoeologous recombination is recurrent in the nascent synthetic allotetraploid Arachis ipaënsis × Arachis correntina4x and its derivatives, G3 Genes|Genomes|Genetics, Volume 11, Issue 4, April 2021, jkab066, https://doi.org/10.1093/g3journal/jkab066

Cobb, A., E. Duell, K. Haase, R. Miller, Y.Q. Wu, and G. Wilson. 2021. Utilizing mycorrhizal responses to guide selective breeding for agricultural sustainability. Plants, People, Planet. DOI: 10.1002/ppp3.10200.

Cooley, K.D., L.E. Sollenberger, A.R. Blount, L.S. da Silva, M.M. Kohmann, P. Aryal, J.C.B. Dubeux Jr., and M.L. Silveira. 2019. A modified ingrowth core to measure root-rhizome accumulation of perennial forage species. Agron. J. 111:3393-3397. https://doi.org/10.2134/agronj2019.01.0051

Cooley, K.D., L.E. Sollenberger, M.M. Kohmann, A.S. Blount, J.C.B. Dubeux, Jr., M.L. Silveira, L.S. da Silva, and P. Aryal. 2020. Rhizoma peanut herbage and root-rhizome responses to extended regrowth periods. Crop Sci. 60:2802–2813. https://dx.doi.org/10.1002/csc2.20236

Cruet-Burgos Clara, Hugo E Cuevas, Louis K Prom, Joseph E Knoll, Lauren R Stutts, Wilfred Vermerris, Genomic Dissection of Anthracnose (Colletotrichum sublineolum) resistance response in sorghum differential line SC112-14. 2020. G3 Genes|Genomes|Genetics, Volume 10, Issue 4, 1 April 2020, Pages 1403–1412, https://doi.org/10.1534/g3.120.401121

Dareus, R., Porto, A.C.M., Bogale, M., DiGennaro, P., Chase, C.A. and Rios, E.F., 2021. Resistance to Meloidogyne enterolobii and Meloidogyne incognita in Cultivated and Wild Cowpea. HortScience, 1(aop), pp.1-9.

Dareus, R, Acharya, JP, Paudel, D, de Souza, C, Gouveia, B, Chase, C, DiGennaro, P, Mulvaney, M, Koenig, R, E.F. Rios. 2021. Phenotypic Characterization of the UC-Riverside Cowpea (Vigna unguiculata) Mini-Core Collection for Phenological and Agronomic Traits in Florida. Crop Sci. 1-13 https://doi.org/10.1002/csc2.20544

Devos Katrien, Bennetzen, Jeff, Missaoui, Ali, and Schliekelman, Paul. 2020. Unraveling the genetics of two key biomass traits that differentiate upland and lowland tetraploid switchgrass ecotypes, colonization by mycorrhizal fungi and frost tolerance. United States: N. p., 2020. Web. doi:10.2172/1735505

Díaz-Pérez, J., K. St. John, S.U. Nambeesan, M.Y. Kabir, J.A Alvarado-Chávez and J Bautista. 2020. Bell pepper (Capsicum annuum L.) plant growth and fruit yield as affected by colored shade nets Acta Horticulturae. DOI: 10.17660/ActaHortic.2020.1268.38.

Gao D, Araujo, ACG, Nascimento, EFMB, Chavarro, MC, Xia H, Jackson, SA, Bertioli DJ, Leal-Bertioli SCM. 2021. ValSten: a new wild species derived allotetraploid for increasing genetic diversity of the peanut crop. Genetic Resources and Crop Evolution. 68(5):1-15. doi.org/10.1007/s10722-020-01076-2

Garcia, L., J.C.B. Dubeux, Jr., L.E. Sollenberger, J.M.B. Vendramini, N. DiLorenzo, E.R.S. Santos, D.M. Jaramillo, M. Ruiz-Moreno. 2021. Nutrient excretion from cattle grazing nitrogen-fertilized grass or grass-legume pastures. Agron. J.). https://doi.org/10.1002/agj2.20675

Gimode, W., Bao, K., Fei, Z. , McGregor C. 2021. QTL associated with gummy stem blight resistance in watermelon. Theor Appl Genet 134, 573–584. https://doi.org/10.1007/s00122-020-03715-9

Gimode, W., Clevenger, J. & McGregor, C. 2020. Fine-mapping of a major quantitative trait locus Qdff3- 1 controlling flowering time in watermelon. Mol Breeding 40, 3. https://doi.org/10.1007/s11032-019- 1087-z

Godwin, C., T. Fang, and Y.Q. Wu. 2021. Genetic identity and diversity among experimental selections and cultivars of vegetatively propagated turf bermudagrass as assessed with SSR Markers. International Turfgrass Society Research Journal. 1-10, DOI: 10.1002/its2.29.

Gopinath, L., J.Q. Moss, and Y.Q. Wu. 2021. Evaluating the freeze tolerance of bermudagrass genotypes. Agrosystems, Geosciences, & Environment. DOI: 10.1002/agg2.20170.

Govindarajulu R, Ashley N Hostetler, Yuguo Xiao, Srinivasa R Chaluvadi, Margarita Mauro-Herrera, Muriel L Siddoway, Clinton Whipple, Jeffrey L Bennetzen, Katrien M Devos, Andrew N Doust, Jennifer S Hawkins. 2021. Integration of high-density genetic mapping with transcriptome analysis uncovers numerous agronomic QTL and reveals candidate genes for the control of tillering in sorghum, G3 Genes|Genomes|Genetics, Volume 11, Issue 2, February 2021, jkab024

Grey, T., Hurdle, N., Rucker, K., & Basinger, N. 2021. Blueberry and blackberry are tolerant to repeated indaziflam applications. Weed Technology, 1-5. doi:10.1017/wet.2021.14

Grossman, A.Y.; Andrade, M.H.M.L.; Chaves, A.L.A.; Mendes Ferreira, M.T.; Techio, V.H.; Lopez, Y.; Begcy, K.; Kenworthy, K.E.; Rios, E.F. 2021. Ploidy Level and Genetic Parameters for Phenotypic Traits in Bermudagrass (Cynodon spp.) Germplasm. Agronomy, 11, 912. https://doi.org/10.3390/agronomy11050912.

Guo, J., Khan, J., Pradhan, S., Shahi, D., Khan, N., Avci, M., Mcbreen, J., Harrison, S., Brown-Guedira, G., Murphy, J.P., Johnson, J., Mergoum, M., Esten Mason, R., Ibrahim, A.M.H., Sutton, R., Griffey, C., Babar, M.A. 2020. Multi-Trait Genomic Prediction of Yield-Related Traits in US Soft Wheat under Variable Water Regimes. Genes, 11, 1270. https://doi.org/10.3390/genes11111270

Harrelson B, Ghimire B, Kemerait R, Culbreath A, Li Z, Severns P, Buck, J. 2020. Assessment of quinone outside inhibitor sensitivity and frogeye leaf spot race of Cercospora sojina in Georgia soybean. Plant Disease 10.1094/PDIS-02-21-0236-RE

Harris-Shultz, K, Knoll, J, Punnuri, S, Niland, E, Ni, X. 2020. Evaluation of strains of Beauveria bassiana and Isaria fumosorosea to control sugarcane aphids on grain sorghum. Agrosyst Geosci Environ. 2020, 3:e20047. https://doi.org/10.1002/agg2.20047

Harris-Shultz, K. R., Hayes, C. M., & Knoll, J. E. 2019. Mapping QTLs and Identification of genes associated with drought resistance in sorghum BT - Sorghum: Methods and Protocols (Z.-Y. Zhao & J. Dahlberg, Eds.). https://doi.org/10.1007/978-1-4939-9039-9_2

Hisam Al Rabbi SM, Ajay Kumar, Sepehr Mohajeri Naraghi, Suraj Sapkota, Mohammed S. Alamri, Elias Elias, Shahryar Kianian, Raed Seetan, Ali Missaoui, Shyam Solanki and Mohamed Mergoum. 2021. Identification of Main-Effect and Environmental Interaction QTL and Their Candidate Genes for Drought Tolerance in a Wheat RIL Population Between Two Elite Spring Cultivars Front. Genet., 17 June 2021. https://doi.org/10.3389/fgene.2021.656037

Hisam Al Rabbi SM, Ajay Kumar, Sepehr Mohajeri Naraghi, Suraj Sapkota, Mohammed S. Alamri, Elias Jaramillo, D.M., J.C.B. Dubeux Jr., L. Sollenberger, C. Mackowiak, J.M.B. Vendramini,DiLorenzo, L.M.D. Queiroz, E.R.S. Santos, L. Garcia, M. Ruiz-Moreno, E. van Santen. 2021. Litter Mass, Deposition Rate, and Decomposition in N-Fertilized or Grass-Legume Grazing Systems. Crop Science https://10.1002/csc2.20475 61:2176-2189.

Hurdle, N., Grey, T., McCullough, P., Shilling, D., & Belcher, J. 2020. Bermudagrass tolerance of indaziflam PRE applications in forage production. Weed Technology, 34(1), 125-128. doi:10.1017/wet.2019.76

Jaramillo, D.M., J.C.B. Dubeux Jr., L.E. Sollenberger, J.M.B. Vendramini, C.L. Mackowiak, N. DiLorenzo, L. Garcia, L.M.D. Queiroz, E.R.S. Santos, B.G.C. Homem, F. van Cleef, M. Ruiz-Moreno. 2021. Water Footprint, Herbage, and Livestock Responses for N-Fertilized Grass and Grass-Legume Grazing Systems. Crop Sci. http://doi.org/10.1002/csc2.20568 .

Kabir, M., Díaz-Pérez, J., Nambeesan, S. U. 2020. Effect of shade levels on plant growth, physiology, and fruit yield in bell pepper (Capsicum annuum L.) Acta Horticulturae DOI: 10.17660/ActaHortic.2020.1268.42

Knoll J, William F. Anderson, Ali Missaoui, Anna Hale, Wayne W. Hanna. 2021. Biomass production and stability of five energycane cultivars at two latitudes in Georgia Agrosyst Geosci Environ. 4:e20146. https://doi.org/10.1002/agg2.20146

Lamon, Samuele Ye Chu Larissa A. Guimaraes David J. Bertioli Soraya C. M. Leal-Bertioli João F. SantosIgnácio J. Godoy Albert K. Culbreath C. Corley Holbrook Peggy Ozias-Akins. 2021. Characterization of peanut lines with interspecific introgressions conferring late leaf spot resistance. Crop Science. 61: 1724– 1738. https://doi.org/10.1002/csc220414

Legendre, R., Kuzy, J. & McGregor, C. Markers for selection of three alleles of ClSUN25-26-27a (Cla011257) associated with fruit shape in watermelon. Mol Breeding 40, 19 2020. https://doi.org/10.1007/s11032-020-1104-2

Levinson, C.M., K.M. Marasigan, Y. Chu, H.T. Stalker, C.C. Holbrook, X. Ni, W.P. Williams, P. Ozias- Akins. 2020. Resistance to fall armyworm (Lepidoptera: Noctuidae) feeding identified in nascent allotetraploids cross-compatible to cultivated peanut (Arachis hypogaea L.). Peanut Science 1 November 2020, 47 (3): 123–134. doi: https://doi.org/10.3146/PS20-13.1

Lovell, J.T., Bentley, N.B., Bhattarai, G. Conner, P.J. et al. 2021. Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding. Nat Commun 12, 4125. https://doi.org/10.1038/s41467-021-24328-w

Lovell, J.T., MacQueen, A.H., Mamidi, S. Knoll, J. et al. 2021. Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature 590, 438–444. https://doi.org/10.1038/s41586-020- 03127-1

Lwe, Z.S.Z., Welti, R., Anco, D., Naveed, S., Rustgi, S., Narayanan, S. 2020. Heat stress elicits remodeling in the anther lipidome of peanut. Scientific Reports 10:22163

Massa AN, Bressano M, Soave JH, Buteler MI, Seijo G, Sobolev VS, Orner VA, Oddino C, Soave SJ, Faustinelli PC, de Blas FJ, Lamb MC, Arias RS. 2021. Genotyping tools and resources to assess peanut germplasm: smut-resistant landraces as a case study. PeerJ 9:e10581 https://doi.org/10.7717/peerj.10581

Meru, G. and McGregor, C. 2020. Effect of Various Soil Media on Disease Severity of Fusarium Wilt in Watermelon. American Journal of Plant Sciences, 11, 1890-1898. doi: 10.4236/ajps.2020.1112135.

Mural, R.V., Grzybowski, M., Miao, C., Damke, A., Sapkota, S., Boyles, R.E., Salas Fernandez, M.G., Schnable, P.S., Sigmon, B., Kresovich, S., Schnable, J.C. 2021. Meta-analysis identifies pleiotropic loci controlling phenotypic trade-offs in sorghum. Genetics 218:iyab087.

Nair S, S.K. Braman, P. Raymer. 2021. Susceptibility of Zoysiagrasses to the Fall Armyworm (Lepidoptera: Noctuidae). Journal of Entomological Science 56 (1): 24–31. doi: https://doi.org/10.18474/0749-8004-56.1.24

Otyama P.I., Roshan Kulkarni, Kelly Chamberlin, Peggy Ozias-Akins, Ye Chu, Lori M Lincoln, Gregory E MacDonald, Noelle L Anglin, Sudhansu Dash, David J Bertioli, David Fernández-Baca, Michelle A Graham, Steven B Cannon, Ethalinda K S Cannon. 2020. Genotypic Characterization of the U.S. Peanut Core Collection, G3 Genes|Genomes|Genetics, Volume 10, Issue 11, 1 November 2020, Pages 4013–4026, https://doi.org/10.1534/g3.120.401306

Paudel, D., Dareus, R., Rosenwald, J., Munoz-Amatriain, M. and Rios, E.F., 2021. Genome-wide association study reveals candidate genes for flowering time in cowpea (Vigna unguiculata [L.] Walp). Frontiers Genetics. https://doi.org/10.3389/fgene.2021.667038

Price, A., Nichols, R., Morton, T., Balkcom, K., Grey, T., & Li, S. 2021. Effect of cover-crop biomass, strip-tillage residue disturbance width, and PRE herbicide placement on cotton weed control, yield, and economics. Weed Technology, 35(3), 385-393. doi:10.1017/wet.2021.8

Qi P, Pendergast TH, Johnson A, Bahri BA, Choi S, Missaoui A, Devos KM. 2021. Quantitative trait locus mapping combined with variant and transcriptome analyses identifies a cluster of gene candidates underlying the variation in leaf wax between upland and lowland switchgrass ecotypes. Theoretical and Applied Genetics 134:1957-1975

Rahnama, M., Phillips, T. D., Farman, M. L. 2020. First Report of the Blast Pathogen, Pyricularia oryzae, on Eragrostis tef in the United States St. Paul, MN, Plant Disease. doi: 10.1094/PDIS-02-20-0255-PDN

Razar, R.M., Makaju, S. & Missaoui, A.M. 2021. QTL mapping of biomass and forage quality traits measured using near-infrared reflectance spectroscopy (NIRS) in switchgrass.Euphytica 217, 51 2021. https://doi.org/10.1007/s10681-021-02788-x

Rennberger, G., Keinath, A.P. 2020. Stachybotriaceae on Cucurbits Demystified: Genetic Diversity and Pathogenicity of Ink Spot Pathogens. Plant disease 104:2242-2251.

Sakhanokho, H.F., Islam-Faridi, N., Babiker, E.M., Nelson, C., Stringer, S.J., Adamczyk Jr, J.J. 2020. Determination of nuclear DNA content, ploidy, and FISH location of ribosomal DNA in Hibiscus hamabo. Scientia Horticulturae. 264:109167. https://doi.org/10.1016/j.scienta.2019.109167.

Sandoya, G.V., B. Maisoneuve, M.J. Truco, C.T. Bull, I. Simko, M. Trent, R.J. Hayes, R.W. Michelmore. 2019. Genetic analysis of resistance to bacterial leaf spot in the heirloom lettuce cultivar Reine des Glaces. Molecular Breeding 39:160 doi:10.1007/s11032-019-1072-6.

Santos, E.R.S., J.C.B. Dubeux, Jr., D.M. Jaramillo, L. Garcia, L.M.D. Queiroz, C.S. Silva, and D.S. Abreu. 2020. Overseeding cool-season forages on rhizoma peanut fields. Crop, Forage, & Turfgrass 6:e20060 https://doi.org/10.1002/cft2.20060

Santos, E.R.S., J.C.B. Dubeux, Jr., D.M. Jaramillo, L. Garcia, C. Mackowiak, A.R.S. Blount, J.D. Pereira Neto, L.M.D. Queiroz, M. Ruiz-Moreno. 2020. Herbage responses and nitrogen agronomic efficiency of bahiagrass-legume mixtures. Agronomy Journal 112:4057-4068. https://doi.org/10.1002/agj2.20278

Santos, E.R.S., J.C.B. Dubeux, Jr., C. Mackowiak, A.R.S. Blount, L. Sollenberger, D.M. Jaramillo , L. Garcia, D. Abreu, R.T. Souza, M. Ruiz-Moreno. 2021. Herbage responses and nitrogen agronomic efficiency of bermudagrass-legume mixtures. Crop Sci. https://doi.org/10.1002/csc2.20552

Sapkota, S, Mergoum, M, Kumar, A, et al. 2020. A novel adult plant leaf rust resistance gene Lr2K38 mapped on wheat chromosome 1AL. Plant Genome 13:e20061 https://doi.org/10.1002/tpg2.20061

Saritha Raman Kavalappara, Hayley Milner, Alton Sparks, Cecilia Mcgregor, William M. Wintermantel, and Sudeep Bag Simmons, AM, Jarret, RL, Cantrell, CL, & Levi, A. 2019. Citrullus ecirrhosus: wild source of resistance against Bemisia tabaci (Hemiptera: Aleyrodidae) for cultivated watermelon. Journal of Economic Entomology. 112: 2425–2432. https://doi.org/10.1093/jee/toz069

Shields, L., Gang, Y., Jordan, K., Sapkota, S., Boatwright, J.L., Jiang, X., Kresovich, S., Boyles, R.E. 2021. Genome‐wide association studies of antimicrobial activity in global sorghum. Crop Science 61:1301-1316.

Singh A, Owen V, Dykes G, Naumann H, Mahapatra A, Terrill T. 2019. Effect of ensiling on nutritional properties of Sericea lespedeza alone or in mixtures with alfalfa. Journal of Agricultural Science and Technology A9 (2019) 310-322 D doi: 10.17265/2161-6256/2019.05.004

Spiekerman JJ, Katrien M. Devos. 2020. The halophyte seashore paspalum uses adaxial leaf papillae for sodium sequestration/ Plant Physiology, Volume 184, Issue 4, Pages 2107–2119, https://doi.org/10.1104/pp.20.00796

Stewart-Brown BB, Vaughn JN, Carter TE Jr, Li Z. 2020. Characterizing the impact of an exotic soybean line on elite cultivar development. PLOS ONE 15(7): e0235434.https://doi.org/10.1371/journal.pone.0235434

Suassuna T, Suassuna N, Martins K, Matos R, Heuert J, Bertioli D, Leal-Bertioli S & Moretzsohn M. 2020. Broadening the variability for peanut breeding with a wild species-derived induced allotetraploid. Agronomy. 10, 1917, doi:10.3390/agronomy10121917

Subburaj, S., Tu, L., Lee, K., Park, G.-S., Lee, H., Chun, J.-P., Lim, Y.-P., Park, M.-W., McGregor, C., Lee, G.-J. 2020. A Genome-Wide Analysis of the Pentatricopeptide Repeat (PPR) Gene Family and PPR- Derived Markers for Flesh Color in Watermelon (Citrullus lanatus). Genes 11, 1125. https://doi.org/10.3390/genes11101125

Tate, T. M., McCullough, P. E., Harrison, M. L., Chen, Z., & Raymer, P. L. 2021. Characterization of mutations conferring inherent resistance to acetyl coenzyme A carboxylase-inhibiting herbicides in turfgrass and grassy weeds. Crop Science 1−15. https://doi.org/10.1002/csc2.20511

Uchimiya M, Knoll JE. 2020. Electroactivity of polyphenols in sweet sorghum (Sorghum bicolor (L.) Moench) cultivars. PLOS ONE 15(7): e0234509.https://doi.org/10.1371/journal.pone.0234509

Wallau, M.O., L.E. Sollenberger, J.M.B. Vendramini, E. van Santen, A.D. Aguiar, and O.F.R. Cunha. 2020. In-situ dry matter and crude protein disappearance dynamics in stockpiled limpograss. Crop Sci. 60:2159–2166. https://doi.org/10.1002/csc2.20144.

Wang DH, Z Wang, KP Le, JR Cortright, HG Park, HJ Tobias and JT Brenna. 2019. Potentially high value conjugated linolenic acids in melon seed waste. J. Agric. Food Chem. 67:10306-10312

Wang DH, Z Wang, JR Cortright, KP Le, L Liu, KSD Kothapalli, and JT Brenna. 2020. Identification of polymethylene-interrupted polyunsaturated fatty acids by solvent-mediated covalent adduct chemical ionization triple quadruple tandem mass spectrometry. Anal. Chem. 92:8209-8217.

Wang X, Shiyu Chen, Xiao Ma, Anna E J Yssel, Srinivasa R Chaluvadi, Matthew S Johnson, Prakash Gangashetty, Falalou Hamidou, Moussa D Sanogo, Arthur Zwaenepoel, Jason Wallace, Van de Peer Y, Jeffrey L Bennetzen, Allen Van Deynze. 2021. Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis), GigaScience, Volume 10, Issue 3, giab013, https://doi.org/10.1093/gigascience/giab013

Wewalwela, J.J., Y. Tian, J.R. Donaldson, B.S. Baldwin, J.J. Varco, J.B. Rushing, H. Lu, and M.A. Williams. 2020. Associative nitrogen fixation linked with three perennial bioenergy grasses growing on marginal lands. GCB-Bioenergy https://doi.org/10.1111/gcbb.12744

Wilber, A.L., J.D. McCurdy, J.M.P. Czarnecki, B.R. Stewart, H. Dong. 2020. Aerial and ground‐based assessments of preemergence herbicide effects on St. Augustinegrass grow‐in. International Turfgrass Society Research Journal

Wilson BE, Reay-Jones F P F, Lama M, Mulcahy M, Reagan T E, Davis J A, Yang Y, Wilson L T, Musser F. 2020. Influence of sorghum cultivar, nitrogen fertilization, and insecticides on infestations of the sugarcane aphid (Hemiptera: Aphididae) in the southern United States. Journal of Economic Entomology 150.

Windham, J., Sharma, S., Kashyap, M.K., Rustgi, S. 2021. CRISPR/Cas12a (Cpf1) and its role in plant genome editing. In: G. Tang, S. Teotia, X. Tang, D. Singh (Eds.), RNA-based technologies for functional genomics in plants. Springer Nature, Cham, Switzerland. pp 15-42.

Yu, S.H., T.L. Fang, H.X. Dong, L.L. Yan, D.L. Martin, J.Q. Moss, C.H. Fontanier, and Y.Q. Wu. 2021. Genetic and QTL mapping in African bermudagrass. The Plant Genome. 14: e20073. DOI:10.1002/tpg2.20073

Yue Y and John M. Ruter 2020. Pavonia × rufula (Malvaceae): An Interspecific Hybrid between Pavonia lasiopetala and Pavonia missionum. HortScience 56:732–735

Zhang, H., M.L. Wang, P. Dang, T. Jiang, S. Zhao, M. Lamb, and C. Chen. 2020. Identification of potential QTLs and genes associated with seed composition traits in peanut (Arachis hypogaea L.) using GWAS and RNA-Seq analysis. Gene. https://doi.org/10.1016/j.gene.2020.145215

 

Non-refereed Publications

Alam T, Anco DJ, Rustgi S (2020) Management of aflatoxins in peanuts. Clemson University Land-Grant Press LGP 1073. https://doi.org/10.34068/report7

Alam, T., Anco, D., Rustgi, S. (2021) Reconditioning and disposition of aflatoxin-contaminated peanut: A guide for the United States peanut producers. Clemson University Land-Grant Press LGP 1116. https://lgpress.clemson.edu/publication/reconditioning-and-disposition-of-aflatoxin-contaminated-peanut- a-guide-for-us-peanut-producers/.

 

Cultivar Releases and Patents

Baldwin, Brian S. and J. Brett Rushing. 2020. Generation of imazapic resistance switchgrass population (Expt. Design. LL PANVI AL IR) [‘Tusca III’]. Patent #10,834,886 – November 2020 Licensed to: Roundstone Seed, Upton KY.

Baldwin, Brian S. 2020. Plant Variety Protection. Selection of lowland switchgrass to enhance precocious germination (Reduced seed dormancy in lowland switchgrass) [‘Espresso’]. Licensed to: Roundstone Seed, Upton KY.

Bertioli DJ, D. Gao C. Ballen-Taborda Y. Chu P. Ozias-Akins S.A. Jackson C.C. Holbrook S.C.M. Leal- Bertioli Registration of GA-BatSten1 and GA-MagSten1, two induced allotetraploids derived from peanut wild relatives with superior resistance to leaf spots, rust and root-knot nematode. J. Plant Regist. 2021, 15: 372– 378. https://doi.org/10.1002/plr2.20133

Boyles, R.E., Brenton, Z.W., Kresovich, S. PVP 201900299. ‘Release of sorghum parental line ‘CU16FL229’

Branch, WD, Brenneman, TB. Registration of ‘GEORGIA-19HP’ peanut. J. Plant Regist. 2020, 14: 306– 310. https://doi.org/10.1002/plr2.20037

Branch, WD. Registration of ‘Georgia-20VHO’ Peanut. J. Plant Regist. 2021, 15: 290– 293. https://doi.org/10.1002/plr2.20127

Branch, WD. Registration of ‘Georgia-Val/HO’ peanut. J. Plant Regist. 2021, 15: 285– 289. https://doi.org/10.1002/plr2.20125

Brown, N, Branch, WD. Registration of Albino-Virescent Leaf peanut genetic stock. J. Plant Regist. 2020, 14: 460– 463. https://doi.org/10.1002/plr2.20038

Brown, N, Branch, WD. Registration of Revolute-Leaf peanut genetic stock. J. Plant Regist. 2020, 14: 464– 466. https://doi.org/10.1002/plr2.20062

Brown, N, Branch, WD. Registration of Spear-shaped Leaf peanut genetic stock. J. Plant Regist. 2020, 14: 457– 459. https://doi.org/10.1002/plr2.20033

Chen, P, Shannon, G, Scaboo, A, et al. Registration of ‘S14-15146GT’ soybean, a high-yielding RR1 cultivar with high oil content and broad disease resistance and adaptation. J. Plant Regist. 2020, 14: 35– 42. https://doi.org/10.1002/plr2.20018

Chen, P., G. Shannon A. Scaboo M. Crisel S. Smothers M. Clubb S. Selves C. C. Vieira M. L. Ali D. Lee T. Nguyen Z. Li M. G. Mitchum J. Bond C. Meinhardt M. Usovsky S. Li A. Mengistu R. T. Robbins. ‘S13-1955C’: A high-yielding conventional soybean with high oil content, multiple disease resistance, broad adaptation. J. Plant Regist. 2021, 15: 318– 325. https://doi.org/10.1002/plr2.20112

Ibrahim, AMH, Sutton, R, Johnson, JW, et al. Registration of ‘GA06343-13E2 (TX-EL2)’ Soft Red Winter Wheat. J. Plant Regist. 2021, 15: 107– 112. https://doi.org/10.1002/plr2.20031

LaBonte, D. 2020. Sweetpotato plant named ’LA17-31’. U.S. Plant Patent 32,020. LaBonte, D. 2020. Sweetpotato plant named ’LA17-120’. U.S. Plant Patent 31,968. LaBonte, D. 2020. Sweetpotato plant named ’LA17-40’. U.S. Plant Patent 31,969. LaBonte, D. 2020. Sweetpotato plant named ‘LA15-527’. U.S. Plant Patent 32,002. LaBonte, D. 2020. Sweetpotato plant named ‘LA17-54’. U.S. Plant Patent 32,003.

LaBonte, D., A. Q. Villordon, T.P. Smith., C.A. Clark. 2020. Sweetpotato plant named ‘LA 13-81’. U.S. Plant Patent 32,021.

LaBonte, D., A. Q. Villordon, C.A. Clark. 2020. Sweetpotato plant named ‘LA 08-21p’. U.S. Plant Patent 31,970.

Mergoum, M, Johnson, JW, Buck, JW, et al. A new soft red winter wheat cultivar, ‘GA 07353-14E19’, adapted to Georgia and the US Southeast environments. J. Plant Regist. 2021, 15: 337– 344. https://doi.org/10.1002/plr2.20113

Mergoum, M, Johnson, JW, Buck, JW, et al. Soft red winter wheat ‘GA 051207-14E53’: Adapted cultivar to Georgia and the U.S. Southeast region. J. Plant Regist. 2021, 15: 132– 139. https://doi.org/10.1002/plr2.20102

Vendramini, J.M.B.; E. Rios, J.C.B. Dubeux Jr., K. Quesenberry, P. Munoz. 2021. Registration of ‘Mislevy’ Bermudagrass. Journal of Plant Registration 2021; 15:7-15. https://doi.org/10.1002/plr2.20093

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