SAES-422 Multistate Research Activity Accomplishments Report

Status: Approved

Basic Information

Participants

Bennett, Mark (bennett.18@osu.edu) - Ohio State University; Bradford, Kent (kjbradford@ucdavis.edu) - University of California, Davis; Cantliffe, Dan (djcant@ufl.edu) - University of Florida; Downie, Bruce (adownie@uky.edu) - University of Kentucky; Geneve, Robert (rgeneve@uky.edu) - University of Kentucky; Gu, Xingyou (xingyou.gu@sdstate.edu) - South Dakota state University; Knapp, Allen (adknapp@iastate.edu) - Iowa State University; LaVigne, Andy (alavigne@amseed.org) - American Seed Trade Association; Leskovar, Daniel (d-leskovar@tamu.edu) - Texas A & M University; McDonald, Miller (mcdonald.2@osu.edu) - Ohio State University; McGrath, Mitch (mitchmcg@msu.edu) - Michigan State University; Nonogaki, Hiro (hiro.nonogaki@oregonstate.edu) - Oregon State University; Norcini, Jeff (wldflowr@ufl.edu) - University of Florida; Perez, Hector (heperez@ufl.edu) - University of Florida; Rukuni, Dzinigai (drukuni@ufl.edu) - University of Florida; Taylor, Alan (agt1@cornell.edu) - Cornell University; Welbaum, Greg (welbaum@vt.edu) - Virginia Tech University;

Meeting opened by Chair: Hiro Nonogaki Oregon State University. Introduced Andy LaVigne: President and CEO of the American Seed Trade Association. Hiro Nonogaki asked for approval of the 2007 W-1168 Annual Meeting Minutes Kent Bradford: moved and Miller McDonald seconded. Minutes passed unanimously. Bradford and Welbaum will be on the committee for determining executive officers. The site selection committee will be Alan Taylor and Bob Geneve. Call for proposals of discussions for further meetings like the translational seed biology meeting. Discussions: Florida agriculture, ASTA, seed research, graduate education, collaborations (industry/government/universities and physiologists/breeders/geneticists), regional seed production industries, specialty groups, general education, distance learning, grants (World Bank, Gates, National Needs USDA, NSF), seed biology recognition, seed health & performance, seed health & conservation, germplasm, crops, identity & visibility, research focus, plant breeding. State reports (CA, MI, FL, OH, NY, TX, KY, SD, VA, OR). Detailed narratives for outputs and outcomes/impacts.

Accomplishments

Detailed paragraphs are included in the minutes attachment. A series of genetic experiments reached the conclusion that the rice qSD12 QTL controls seed dormancy through the embryo or endosperm tissues. Four wheat populations of about 700 double haploid or recombinant inbred lines were evaluated for seed dormancy and resistance to pre-harvest sprouting. Two QTL for germination heat sensitivity were mapped on the short arm of chromosome 3A (QGhs.osu-3A) and the long arm of chromosome 4A (QGhs.osu-4A) in Intrada x Cimarron RIL population of winter wheat. These two QTL were also mapped in Jagger x 2174 RIL population of winter wheat in similar genomic regions. The maize RILs (IBM 302) exhibit poor field emergence. Laboratory studies were conducted to find QTLs associated with seed vigor. The outputs from these studies are QTL maps from germination under low temperatures. Analyses of QTLs across a range of biologically important germination temperatures will be conducted (IA). Soybean seed with low raffinose, stachyose, and phytin are desired for feeding non-ruminant animals, but may have reduced agronomic quality. Research results provided information on the composition of low-raffinose, low-stachyose soybean seeds with normal phytin composition. Previously a major quantitative trait loci (QTL) termed Htg6.1 was identified that confers the ability for lettuce (Lactuca sativa L.) seeds to germinate at high temperatures (up to 37°C) in an accession of L. serriola (UC96US23) in a recombinant inbred line population derived from a cross with L. sativa cv. Salinas. Multiple near-isogenic lines (NILs) were developed in the Salinas background carrying an introgression containing the QTL locus. Multiple NIL families were utilized to demonstrate that this genomic region conferred increased upper temperature limits for germination. Additional fine mapping of the QTL locus using single feature polymorphism (SFP) markers developed using a lettuce microarray identified a gene encoding an enzyme in the abscisic acid (ABA) biosynthetic pathway (LsNCED4) that localized to the center of the QTL interval. Expression analyses were conducted on over 80 genes in the abscisic acid (ABA), gibberellin (GA), ethylene and light regulation pathways in relation to thermoinhibition in different genotypes. Gene expression studies have clarified some of the regulatory interactions among ABA, GA and ethylene in regulating seed responses to light and temperature (CA). Modifying the maternal plant environment has significant effects on lettuce seed quality. By controlling specific environmental conditions during seed production of the commercial lettuce cultivar Tango it was possible to modify seed size, germinability, thermoinhibition, photodormancy and storability. In these studies, one of the first questions to be addressed is if the effects of light quality on storability are observed in other lettuce genotypes and, more importantly, in other species. Additionally, finding a significant correlation between light spectrum quality of the maternal environment and storability in a wide range of species would be important for understanding the seed bank dynamics of native and weed plants. Basically, it would mean that seeds produced under a canopy shadow (i.e. lower R:FR ratio) have higher storability and are better prepared to remain viable for longer periods of time (OH). Early events in sugar beet germination were investigated using quantitative PCR. One hundred ninety two gene products were tested for expression at 0, 24, 72, and 96 hours post-imbibition. Differentially expressed genes generally showed expected patterns of expression, however results are preliminary (MI). Seed germination as well as longevity in dry storage are attributes affected by the testa (seed coat). The brownseed1 (bs1) gene in tomato is unknown. Recombinants between Solanum esculentum and S. pimpinellifolium were subjected to PCR with a variety of primers generating CAPS, dCAPS, and SSLP markers to continue fine mapping bs1 (KY). Germination of orchid seeds is more successful when seeds are harvested from immature pods. Protocols for decontaminating orchid seeds with calcium hypochlorite for propagation through tissue culture have been optimized. Orchid seeds can survive freezing in liquid nitrogen and therefore can be stored in genebanks cryogenically. In collaboration with Dr. Zhiwu Li, orchid was genetically transformed with a hairy root expression cassette and this work is continuing to genetically transform orchids for physiological studies. The orchid caraspace is a thin barrier to macromolecule diffusion and it may control orchid seed germination (VA). To identify DNA sites to which AGL15 binds in vivo, a chromatin immunoprecipitation (ChIP) approach was used to immunoprecipitate AGL15 and associated DNA fragments. In a ChIP-on-chip approach, the DNA recovered from immunoprecipitation using AGL15-specific antiserum or preimmune serum was converted to probe to hybridize to the Affymetrix GeneChip® Arabidopsis Tiling 1.0R Array. This allowed nearly global mapping of in vivo binding sites for AGL15 that numbered ~2000. Affymetrix ATH1 arrays were used to investigate gene expression changes in response to accumulation of AGL15/18. We are currently analyzing results to identify genes that may be directly regulated by AGL15 and those which may be farther downstream in the regulatory network. The roles of three unique Tandem Zinc Finger (TZF) genes in seed development and environmental responses in Arabidopsis thaliana were studied. Several sugar responsive TZF genes were identified using microarray analyses. Sequence analysis has revealed a family of 11 genes in the Arabidiosis genome that contains this unique TZF. It is interesting to find out the roles of these genes because the molecular mechanisms underlying ARE-mediated mRNA decay are unknown in plants (OH). Arabidopsis seed mutants completing germination were characterized. Yeast-two hybrid, western blot, single- and double-mutant analysis have determined that the F-BOX protein COLD TEMPERATURE GERMINATING10 (CTG10) results in the destruction of PHYTOCHROME INTERACTING FACTOR1 (PIF1) (KY). DELLA proteins are negative regulators of GA responses including seed germination, stem elongation, and fertility. GA can stimulate GA responses by causing proteolysis of DELLA repressors by the ubiquitin-proteasome pathway. This destruction requires GA biosynthesis, three functionally redundant GA receptors GIBBERELLIN INSENSITIVE DWARF1 (GID1a, GID1b and GID1c), and the SLEEPY1 (SLY1) F-box subunit of an SCF E3 ubiquitin ligase. Using sly1 mutants in which DELLA proteins remain stable after GA application, we found that GA regulates DELLA repressor activity by a mechanism distinct from protein destruction. Overexpression of GID1 genes rescued the dwarf and infertility phenotypes of the sly1 mutants without altering accumulation of DELLA proteins RGA and GAI. This rescue required GA biosynthesis and the presence of a functional DELLA motif in RGA and GAI. Both the DELLA motif and GA are required for the protein interaction of DELLA protein and GID1. The sly1 mutants display a less severe dwarf phenotype than the GA biosynthesis mutant ga1-3 or the gid1a gid1b gid1c triple mutant despite the fact that sly1 mutants accumulate far higher levels of DELLA protein. Based on double mutant analysis, it appears that both intermediate phenotype and high level DELLA accumulation in sly1 mutants require GA and a functional DELLA motif. These results suggest GA-bound GID1 can block DELLA repressor activity by direct protein-protein interaction with the DELLA domain, and this interaction may lead to increased DELLA accumulation (WA). To identify and characterize key transcription factors potentially associated with seed germination and stand establishment, miRNA regulated genes were characterized. Results suggest that miRNAs play critical roles in many different stages of plant development including seed germination and seedling growth. Objective 2. Determine and model the biotic and abiotic factors affecting seed germination, seedling emergence, and establishment of sustainable populations in natural and agro-ecological systems. Sensitivity of mature soybean seeds to imbibitional chilling were determined for low & normal raffinose and stachyose seeds, low raffinose, stachyose, and phytin seeds. Research results provided information on the sensitivity of low-raffinose, low-stachyose, low-phytin soybean seeds to imbibitional chilling injury (NY). A population-based threshold model was applied to quantify the responses of barley seed germination to oxygen availability, ABA and GA. The ability to quantify the sensitivity of seed germination to combinations of oxygen, ABA and GA revealed that oxygen availability and hormones interact to regulate germination, particularly in intact cereal grains (CA). Pritchardia remota (Arecaceae) is an endangered palm endemic to Hawaii. Management plans call for ex situ conservation of this species. However, the ability to store seed using conventional methods has not been investigated. Research on palm seed conservation was performed. Embryos seem sensitive to stresses imposed by high levels of drying and do not exhibit extreme desiccation tolerance required for conservation in genebanks. Therefore, until the effects of enforced desiccation on potential embryo dormancy can be elucidated further the feasibility of storage in conventional genebanks remains questionable. It is concluded that P. remota embryos possess a storage physiology intermediate to the recalcitrant and orthodox types (FL). Summer farewell (Dalea pinnata) is a legume found in upland ecosystems throughout the southeastern United States and often used in seed mixes for restoration purposes. It also represents an opportunity for the emerging native seed industry in this region. Yet, germination characteristics for summer farewell are not reported. Several key outcomes from studies described below are evident. First, restoration practitioners should expect low initial germination for summer farewell after seed shedding or sowing of non-treated seeds. Second, low germination does not necessarily equate to failure since seeds of summer farewell have the ability to form a soil seed bank. Third, the majority of the seed population possesses physical dormancy but this dormancy can be readily broken through scarification. Fourth, the seed or seedling producer may increase germination by scarifying seeds. Finally, further studies dealing with seed development, polymorphism, and the role of fire on dormancy break are required to determine how these factors influence germination and recruitment of summer farewell (FL). The principles of PCR and Density Gradient Gel Electrophoresis have been applied to studying microbial seed ecology. This technique along with 16S gene sequencing will allow use to genetically profile microbial populations residing on seeds (VA). Objective 3. Develop, evaluate, and transfer technologies to assess and improve seed and seedling quality, health, performance, utilization, and preservation. Many seed crops have been identified as suitable for biofuel production producing a need for high quality seed lots that will produce optimum plant stands with the potential for maximum biomass production. Seed dormancy, suboptimal soil temperatures, and pathogens often lower seed quality and can negatively impact stand establishment. Seed testing methods provide an overall assessment of the quality of a seed lot; however, variants in the germination test method can have a major influence over final germination rates and percentages. Knowledge of the seed biology of species used for biofuel production is needed to understand factors or conditions limiting germination. Specific technology methods can be adapted or developed to optimize seed quality and stand establishment (NY). Because of its wide geographic distribution and high yield potential, switchgrass is considered a leading candidate as bioenergy crop. Poor stand establishment is a frequently encountered problem in growing switchgrass. This is mainly associated with high degree of dormancy of switchgrass seeds. Global gene expression analysis using rice long-oligo arrays were conducted to identify genes that showed differential expression in dry and germinating switchgrass seeds (TN). Sweet corn (Zea mays L.) seed has naturally low physiological quality compared to field corn. The use of priming treatments has been recommended to decrease the time between sowing and seedling emergence. In sweet corn seeds, hydropriming and osmopriming methods increased the uniformity of seedling emergence and reduced the range of days for germination. Priming evaluation is normally conducted by germination assays; however for vigor analysis of seed lots, more precise, quick and efficient tests are desirable (OH) Results obtained for sweet corn sh2 'SWB 551' and 'Obsession' hybrids demonstrated that high quality sweet corn seed lots respond positively to priming; however, priming is not beneficial for seed lots with medium physiological quality. The best treatment using the drum priming system was 36 h priming and for this duration, SVIS (vigor index ratio of 70 growth + 30 uniformity) produced similar results to seedling emergence assessments documenting this as a rapid seed vigor test that can identify the efficacy of priming treatments (OH). Proteomic analysis of the wheat grain has advanced our understanding of endosperm and amyloplast proteins. The gluten proteins, a complex collection of highly repetitive storage proteins, are of major interest since they determine the characteristics of extensibility, elasticity and gas-holding capacity that are unique to wheat flour doughs. Proteomics has provided new information on the identification and regulation of major metabolic pathways functional in the endosperm and amyloplast, knowledge that is fundamental to the understanding of both the quality and productivity of the wheat grain (CA). Seed proteins of sorghum are less digestible than those of other cereals and digestibility is exacerbated by wet cooking the meal or flour, which results in significant nutritional losses. To address this problem, the properties of two sorghum lines that have a common pedigree but differ in digestibility were analyzed. Consistent with results based on a ruminal fluid assay, the protein and starch of one line (KS48) was more thoroughly digested than that of the other (KS51) using in vitro assays based on pepsin and a-amylase. The indigestibility of KS51 relative to KS48 was shown to be due to (i) a greater abundance of disulfide-bonded proteins; (ii) presence in KS51 of non-waxy starch and the accompanying granule-bound starch synthase; and (iii) the differing nature of the protein matrix and its interaction with starch. The current findings suggest that each of these factors should be considered in efforts to enhance the nutritional value of sorghum grain (CA). Seed priming (controlled hydration followed by drying) is used to overcome thermoinhibition in lettuce and to speed germination in a number of species. Seed priming (prehydration and drying) is widely used in high-value seeds to improve seed germination uniformity and speed and to overcome dormancy, particularly in lettuce, where it increases the upper temperature limit for germination. Transfer of the trait to cultivars may have the added benefit of making them more responsive to priming treatments. (CA). Effects of aqueous slurry seed coatings were examined. Field and laboratory bioassays were conducted in multiple States (Delaware, Maryland, New York, Ohio and Virginia) to assess efficacy of thiamethoxam, and clothianidin + imidacloprid seed treatments and compare with efficacy of in-furrow applications of thiamethoxam, and imidacloprid. A growth chamber study investigated abiotic stress tolerance of artichoke transplants. A method to extract true seeds from beet fruits (seedballs) was enhanced. The method involves a brief soak in water that resulted in making the seedball pliable, deformation of the wetted seedball with firm pressure until the cap separated from the seedball, and teasing the true seed from the fruit. This method is being used to investigate mechanisms of seedling vigor and assessing seed quality in sugar beet during the critical imbibition, biochemical reactivation, and early growth of sugar beet seedlings (MI). A new instrument to measure respiration (oxygen consumption) of individual seeds in a 96-well format (Q2, www.astecglobal.net) was evaluated as a seed vigor test. Seed lots representing diverse quality levels and enhancement treatments were assessed in the instrument. Indices associated with the quality of seed lots were calculated based upon the parameters of the oxygen uptake patterns of individual seeds. The relationships of individual seed respiratory patterns were evaluated with respect to other indices of seed quality. While some technical improvements are still required, the Q2 instrument provides a useful tool for evaluating seed quality (CA). Vigorous and healthy seeds are an essential start toward successful crop production. Seed sanitation methods (disinfectants, heat treatments, biological protectants) may be more or less successful depending on factors such as seed vigor, seed maturity and initial levels of seed pathogens. Studies were conducted to evaluate (i) the effectiveness of seed disinfectants and chemical treatment in eliminating Clavibacter michiganensis subsp. michiganensis (Cmm), the causative agent of bacterial canker, on and in tomato seed, (ii) the effectiveness of seed treatment combined with biocontrol bacteria in eliminating Cmm on and in tomato seed, (iii) the influence of seed treatment on seed vigor and disease control effect in greenhouse tomato seedlings, (iv) the influence of seed treatment on seed vigor in storage, and (v) the influence of seed treatment on seed vigor (OH). The Seed Vigor Imaging System (SVIS) is a vigor test that evaluates seed performance by scanned images of young (three-day-old) seedlings evaluated by computer software. In SVIS, seeds are germinated at 25oC, the resulting seedlings scanned and their length and uniformity analyzed using software that computes an overall vigor index. This test provides a rapid and objective measurement of seed quality, and the images and vigor indices are stored and a data base developed for future reference. The objective of this study was to analyze the effects of priming treatment on sweet corn seeds using SVIS (OH). Seed technology and production training DVDs have been completed. Seed testing (importance of seed testing; seed quality; tetrazolium tests; genetic purity) and seed production modules (coffee/tropical forage grasses; sunflower; maize) are currently being marketed by the Society of Commercial Seed Technologists. (OH). A one-dimensional temperature programmable thermogradient table was designed with LED grow lights to utilize new technologies for seed testing. The case and lids are made extensively from polymers that reduce weight and are not susceptible to water damage like wood framed tables. The TASCO gradient tables expand capabilities for seed testing and research because temperature gradients can be programmed and seedlings can be grown using the LED grow lights. The LED lights provide wavelengths in the photosynthetic spectrum and do not burn out like conventional lights. Since water resistant polymers are extensively used in construction, the case is water resistance (VA). A protocol to rapidly view high resolution confocal images of purpletop (Tridens flavus) embryos in dormant and non-dormant (scarified) caryopses was developed. Decreased days to 10%, 50% and 90% of final germination percentage and increased length of radicle and widths of main axis and radicle were concomitant with rapid subsequent germination of non-dormant carypopses, but not of dormant ones. Thus, embryo observation using confocal microscopy may be a useful technique for establishing seed vigor (DE). Incubating seeds (florets) of Aristida stricta in glycerol, lactic acid, glycerol + lactic acid, or lactophenol for up to 24 hr failed to clear the embryo coverings enough to view TZ staining patterns. Use of a press test only accurately predicted that a seed was nonviable. Based on preliminary results, viability and germination of a seed lot can be accurately determined by conducting a press test, subjecting only filled seeds to a germination test (14 days @ 15/25oC in dark), and then conducting a press test on nongerminated seeds (FL). Priming Coreopsis floridana seeds in polyethylene glycol (PEG) +BA or SMP (emathlite clay)+BA resulted in 100% germination at 20 or 30oC in the dark. Germination of C. lanceolata at supraoptimal temperatures was improved by priming seeds in PEG+BA (FL).

Impacts

  1. A large number of genes that showed differential expression in dry and germinating switchgrass seeds were identified. Some of these genes may be critical for regulating dormancy and germination of switchgrass seeds. Further detailed functional characterization of these genes may lead to novel insight into the molecular mechanisms of seed dormancy and dormancy breaking in switchgrass. Such information may provide important knowledge and tools for genetic improvement of switchgrass as a bioenergy crop.
  2. The rice qSD12 locus is the first seed dormancy QTL that has been genetically characterized for seed tissue expression. The partial genetic map for the rice qSD1 region facilitates map-based cloning the gene underlying the dormancy QTL.
  3. Wheat seed quality research has provided a foundation both for plant breeders to search for specific traits and cereal chemists to seek a solution for dough quality. These are longstanding problems that have faced agriculture for decade.
  4. The phenotypic data obtained from the wheat seed dormancy segregating populations will be used to map the QTLs for resistance to pre-harvest sprouting.
  5. Soybean seed research results led to a new idea for improvement of field emergence of low-phytin soybean seeds. Increasing the concentration of total a-galactosides of myo-inositol, D-pinitol, and/or D-chiro-inositol may improve field performance of low-phytin soybean lines. Since low-phytin soybean has low galactinol concentrations (the galactosyl donor for galactopinitols and the raffinose family oligosaccharides), it is specifically proposed that an increase in fagopyritols, a-galactosides of D-chiro-inositol, may result in improved field performance of low-phytin soybean.
  6. The detrimental effects of freezing temperatures at the late stages of seed development and maturation can have a dramatic effect on corn seed quality. Freezing injury in corn causes irreversible physiological damage. Every four or five years, an early fall frost in Iowa causes substantial monetary losses for the seed industry due to lower seed germination and vigor. Yet, damaged seed does not show adverse symptoms immediately after harvest. Several months later, seed vigor will decrease below the market standards for the seed trade. Seed vigor is the expression of an aggregate of traits. QTL analysis is therefore a logical starting point to understand the genetics and biochemistry of seed vigor. The analysis of QTLs across a range of maize seed germination temperatures will explain some elements of the variation inherent in QTL studies.
  7. Grain sorghum (Sorghum bicolor L. Moench) ranks fifth in worldwide production among cereal crops, after wheat, rice, corn and barley. The U.S. is the number two producer and the number one exporter of sorghum, primarily to Mexico for use as animal feed. Popularity of sorghum is due in part to its ability to produce reasonable yields in warmer, drier regions. Because subsistence farmers in Africa and Asia cultivate sorghum widely as a staple food for home consumption, the crop is a principal source of energy and protein for millions of the worlds poorest. The research on sorghum seed quality has huge impacts on U.S. and global agriculture.
  8. In lettuce, most of the traits improved through domestication are associated with the leaf characteristics, while the seeds exhibit traits associated with wild plants, such as dormancy. A gene (LsNCED4) that is likely to be the basis of the trait has been identified and revealed some of the hormonal mechanisms that regulate germination and could be applied to control weeds or enhance crop emergence. Developing varieties whose seeds respond more strongly to priming will enhance seed performance under stressful field conditions.
  9. The advances in knowledge of how light, temperature and water availability affects lettuce seed vigor improved seed quality. Seed companies and growers will refine and adjust production methods to reliably produce lettuce seed lots of high vigor.
  10. Understanding seedling morphological and physiological responses during germination, growth and establishment under extreme temperature and drought conditions is important to develop seedling conditioning treatments to mitigate those stresses. ABA alone or in combination with other plant growth regulator (PGR) have the potential to improve transplant stress tolerance by regulating transpiration, enhance plant water status and by controlling transplant development.
  11. An in-depth understanding of gene expression during the critical early events of sugar beet seed germination is needed in order to identify key regulatory steps in seedling vigor, and identify mechanisms of seedling vigor under different germination regimes and in different genetic backgrounds.
  12. The new seed extraction method from beet fruits to allows access to the previously inaccessible true seed, which has been an impediment to assessing seed quality and biochemical events underpinning seed vigor in sugar beet.
  13. Seed respiratory rates during germination may provide rapid and simple indices to assess vigor differences among lots.
  14. The systemic insecticide seed treatments, thiamethoxam, and a combination of clothianidin + imidacloprid reduced cucumber beetle damage in cucumber and pumpkin. These insecticides were not injurious to seed. Thiamethoxam was labeled by Syngenta in 2008, and a label is being pursued for combination of clothianidin + imidacloprid by Bayer CropSciences with IR-4 and other regulatory agencies.
  15. The Seed Vigor Imaging System (SVIS) has provided a rapid and objective measurement of seed quality.
  16. In cooperation with TASCO LLC of Christiansburg, VA programmable one-dimensional thermogradient tables with LED lighting are being produced commercially for scientists and the seed industry (VA). The TASCO tables sell for significantly less money than other thermogradient tables that are commercially available.
  17. Dormancy classification studies in this project are helping to fill significant gaps in our knowledge of the world biogeography of seed dormancy. The research on Convolvuloideae is especially the first time for the phylogeny of seed dormancy in a large complex subfamily being elucidated.
  18. Understanding the physical and physiological mechanisms that control seed dormancy can provide approaches to modify it for agricultural applications. In barley, for example, uniform germination is critical for the malting process. Knowledge of the roles of seed covering tissues and hormones in regulating dormancy and germination will reveal new methods to attain uniform germination without reducing dormancy to the point that pre-harvest sprouting is problematic.
  19. In terms of global economic importance the palm family, Arecaceae, is categorized with Fabaceae and Poaceae. Palms are widely distributed primarily throughout sub-tropical and tropical ecosystems where they are highly utilized by indigenous people, present sustenance for many animals, and provide vital ecological functions. Despite these benefits, the genetic diversity of many palm species is threatened due to habitat loss and overexploitation. Furthermore, ex situ conservation of Arecaceae within gene banks is hampered due to a poor understanding of palm seed biology. The palm research in this project has provided useful information for palm seed conservation.
  20. Native wild flower seed research will enhance the establishment of sustainable roadside populations in a cost-effective manner. The presence of roadside populations of native wildflower ecotypes will reduce mowing costs when mowing cycles are timed to promote reseeding.
  21. The press test in combination with a germination test to determine viability and germination of Aristida stricta seeds is a protocol that may be more cost effective than the tetrazolium (TZ) test in combination with germination testing.
  22. Priming seeds of Coreopsis floridana and C. lanceolata provides a potential means of enhancing germination and establishment under field conditions, even under high summer temperatures.
  23. Seed lot quality has surfaced as a key issue in commercially available gamagrass seed. Significant improvement in germination and stand could result from density separation for heavier seeds. In addition, H2O2 could be an effective alternative to stratification with the advantage being a reduction in the time required for dormancy release (i.e. 12 hr for H2O2 compared to 4 to 6 weeks stratification.
  24. The orchid seed research influenced the research of other orchid researchers who used to view the caraspace as an insignificant tissue that simply got in the way of orchid embryo research. Transformation research on orchid, once thought impossible, it now becoming more routine. Calcium chlororide is being adopted to sanitize orchid seeds for propagation. Other research groups are exploring cryopreservation of orchid seeds and the role of the caraspace in controlling dormancy/germination.
  25. The study of microbial seed ecology using the principles of PCR and Density Gradient Gel Electrophoresis is anticipated to provide valuable information on seed transmitted organism because both culturable and nonculturable organisms can be detected.
  26. A means of regeneration, either by organogenesis or somatic embryogenesis, is necessary for genetic engineering for most plants. However, somatic embryogenesis is poorly understood. Somatic embryogenesis serves as a model for zygotic processes that are also largely a mystery and difficult to study because early embryo development is relatively inaccessible. A better understanding of developmental mechanisms controlling somatic embryogenesis including AGL15 will aid regeneration of recalcitrant species in culture and contribute to an understanding of seed development.
  27. A better understanding of the stresses imposed upon the orthodox seed proteome may provide techniques to better handle seeds during late development so as to prepare them to rapidly and efficiently repair this damage.
  28. Identification of TZF genes in Arabidopsis advanced our knowledge on the development and expression of seed quality.
  29. The research on the DELLA seed germination repressor proteins has determined that GA receptor GID1 can inactivate the DELLA repressor RGA in the absence of protein destruction and provided new insight into hormonal regulation of seed germination.
  30. Characterization of miRNAs in seeds has provided new insights into the mechanisms of gene regulation during seed development and germinaiton. miRNAs are conserved among wide ranges of plant species. Therefore, the outcomes from Arabidopsis seed miRNA research can be applied to crop species.

Publications

Anderson, J.V., Foley, M.E., Horvath, D.P., and Gu, X.-Y. 2008. Dormancy regulation in reproductive structures of weedy plants; a comparison between seeds and vegetative buds. Sleeping Beauties - Dormancy and resistance in harsh environments - Molecular, proteomic and metabolomic aspects, Berlin, 5/18-20/08. Argyris, J., Dahal, P., Truco, M.J., Ochoa, O., Still. D.W., Michelmore, R.W., and Bradford, K.J. 2007. Genetic analysis of lettuce seed thermoinhibition. Acta Hortic.782: 23-33. Argyris, J.M. 2008. Natural variation and genetic analyses of seed and seedling traits in lettuce: Discovery, confirmation and proposed role for a quantitative trait locus in regulating seed dormancy at high temperature. Ph.D. Thesis. University of California, Davis. Argyris, J.M., Dahal, P., Hayashi, E., Still, D.W., and Bradford, K.J. 2008. Genetic variation for lettuce seed thermoinhibition is associated with temperature-sensitive expression of abscisic acid, gibberellin and ethylene biosynthesis, metabolism and response genes. Plant Physiol. 148: 926-947. Ariizumi, T., Murase, K., Sun, T., and Steber, C.M. 2008. Proteolysis-independent downregulation of DELLA repression in Arabidopsis by the gibberellin receptor GIBBERELLIN INSENSITIVE DWARF1. Plant Cell, Vol. 20: 24472459. Baskin, C.C., and Baskin, J.M. 2008. Advances in understanding seed dormancy at the whole-seed level: An ecological, biogeographical and phylogenetic perspective. Acta Botanica Yunnanica 30: 279-294. Baskin, C.C., Chien, C.T., Chen, S.Y., and Baskin, J.M.. 2008. Germination of Viburnum odoratissimum seeds: A new level of morphophysiological dormancy. Seed Sci. Res. 18: 179-184. Baskin, J.M., and Baskin, C.C. 2008. Some considerations for adoption of Nikolaevas formula system into seed dormancy classification. Seed Sci. Res. 18: 131-137. Bennett, M.A., Grassbaugh, E.M., Hofelich, M., and Miller, J. 2008. Organic/transitional edamame (vegetable soybean) and sweet corn seedling establishment. In: Vegetable Research Results - 2007. OSU Hort & Crop Sci. Ser. No. 757 p. 11-13. Bradford, K.J., Argyris, J., Dahal, P., Truco, M.J., Ochoa, O., Still, D.W., and Michelmore, R.W. 2008. Genetics and candidate gene analysis of lettuce seed thermodormancy: relationship of QTL for high temperature germination with hormone biosynthesis and response genes. Plant and Animal Genome Conference XVI, San Diego, CA, 1/16/08. Bradford, K.J., Argyris, J., Dahal, P., Truco, M.J., Ochoa, O., Still, D.W., Hayashi, E., and Michelmore, R.W. 2008. Lettuce seed thermodormancy: Genetic and hormonal regulation of germination. Western Plant Growth Regulator Society meeting, Monterey, CA, 1/30/08. Bradford, K.J., Argyris, J., Dahal, P., Truco, M.J., Ochoa, O., Still, D.W., Hayashi, E., and Michelmore, R.W. 2008. 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