11/15/2012

Publications

Janse, J.D., Valentini, F., Purcell, A.H. and Almeida, R.P.P. 2012. Detection and identification methods and news tests as used and developed in the framework of COST873 for bacteria pathogenic to stone fruits and nuts: Xylel
la fastidiosa. Journal of Plant Pathology 94: S1.147-154.


Tsai, C.W., Daugherty, M.P. and Almeida, R.P.P. 2012. Seasonal dynamics and virus translocation of Grapevine leafroll-associated virus 3 in grapevine cultivars. Plant Pathology 61: 977-985.


Daane, K.M., Almeida, R.P.P., Bell, V.A., Botton, M., Fallahzadeh, M., Mani, M., Miano, J.L., Sforza, R., Walton, V.M. and Zaveizo, T. 2012. Biology and management of mealybugs in vineyards. p. 271-307. In: N.J. Bostanian et al. (eds.) Arthropod Management in Vineyards: Pests, Approaches, and Future Directions. Springer. 505p.


Almeida, R.P.P., Killiny, N., Newman, K.L., Chatterjee, S., Ionescu, M. and Lindow, S.E. 2012. Contribution of rpfB to cell-cell signal synthesis, virulence, and vector transmission of Xylella fastidiosa. Molecular Plant-Microbe Interactions 25: 453-462.


Killiny, N., Rashed, A. and Almeida, R.P.P. 2012. Disrupting the transmission of a vector-borne plant pathogen. Applied and Environmental Microbiology 78: 638-643.


Daugherty, M.P., Gruber, B.R., Almeida, R.P.P., Anderson, M.M., Cooper, M.L., Rasmussen, Y. and Weber, E. 2012. Testing the efficacy of barrier plantings for limiting sharpshooter spread. American Journal of Enology and Viticulture 63: 139-143.


Daane, K.M., Middleton, M.C., Sforza, R., Cooper, M.L., Walton, V.M., Walsh, D.B., Zaviezo, T. and Almeida, R.P.P. 2011. Development of a multiplex PCR for identification of vineyard mealybugs. Environmental Entomology 40: 1595-1603.


Tsai, C.W., Bosco, D., Daane, K.M. and Almeida, R.P.P. 2011. Effect of host plant tissue on the vector transmission of Grapevine leafroll-associated virus 3. Journal of Economic Entomology 104: 1480-1485.


Rashed, A., Daugherty, M.P. and Almeida, R.P.P. 2011. Grapevine genotype susceptibility to Xylella fastidiosa does not predict vector transmission success. Environmental Entomology 40: 1192-1199.


Sharma, A.M., Wang, J., Duffy, S., Zhang, S., Wong, M.K., Rashed, A., Cooper, M.L., Daane, K.M. and Almeida, R.P.P. 2011. Occurrence of grapevine leafroll-associated virus complex in Napa Valley. PLoS ONE 6: e26227.


Killiny, N. and Almeida, R.P.P. 2011. Gene regulation mediates host specificity of a bacterial pathogen. Environmental Microbiology Reports 3: 791-797.


Daugherty, M.P., Rashed, A., Almeida, R.P.P. and Perring, T.M. 2011. Vector preference for hosts differing in infection status: sharpshooter movement and Xylella fastidiosa transmission. Ecological Entomology 36: 654-662.


Plucinski, M.M., Starfield, R. and Almeida, R.P.P. 2011. Inferring social network structure from bacterial sequence data. PLoS ONE 6: e22685.


Gutierrez, A.P., Ponti, L., Hoddle, M., Almeida, R.P.P. and Irvin, N.A. 2011. Geographic distribution and relative abundance of the invasive glassy-winged sharpshooter: effects of temperature and egg parasitoids. Environmental Entomology 40: 755-769.


Kung, S.H. and Almeida, R.P.P. 2011. Natural competence and recombination in the plant pathogen Xylella fastidiosa. Applied and Environmental Microbiology 77: 5278-5284.


Coletta-Filho, H.D., Bittleston, L.S. and Almeida, R.P.P. 2011. Spatial genetic structure of a vector-borne generalist pathogen. Applied and Environmental Microbiology 77: 2596-2601.


Degnan, P.H., Bittleston, L.S., Hansen, A.K., Sabree, Z.L., Moran, N.A. and Almeida, R.P.P. 2011. Origin and examination of a leafhopper facultative endosymbiont. Current Microbiology 62: 1565-1572.


Rashed, A., Killiny, N., Kwan, J. and Almeida, R.P.P. 2011. Background matching behaviour and pathogen acquisition: Plant site preference does not predict bacterial acquisition efficiency by vectors. Arthropod-Plant Interactions 5: 97-106.


Wang, J., Sharma, A.M., Duffy, S. and Almeida, R.P.P. 2011. Genetic diversity in the 3' terminal 4.7-kb region of Grapevine leafroll-associated virus 3. Phytopathology 101: 445-450.


Liming Lin, Ruhui Li, Ray Mock, and Gary Kinard, 2012. One-Step multiplex RT-PCR for simultaneous detection of four pome tree viroids. European Journal of Plant Pathology 133: 765-772.


Wei-Li Rao, Fan Li, Ruijuan Zuo and Ruhui Li, 2011. First Report of Little cherry virus 2 in Flowering and Sweet Cherry Trees in China. Plant Disease 95: 1484.


Schilder, A., and Brown-Rytlewski, D. Virus and Virus-like diseases in Grapes. MSU Extension, Michigan State University (in preparation).


Schilder, A. 2011. Blueberry Scorch Virus. Regional Pest Alert, North Central IPM Center, 2 pp.


Schilder, A. 2011. Blueberry Shock Virus. Regional Pest Alert, North Central IPM Center, 2 pp.


Isaacs, R., Schilder, A., Zabadal, T., and Weigle. T. 2011. A pocket guide for grape IPM scouting in the North Central and Eastern U.S. Michigan State University Extension Bulletin E-2889. 4th Edition.


Wise, J. C., Gut, L. J., Isaacs, R., Schilder, A. M. C., Sundin, G. W., Zandstra, B., Hanson, E., and Shane, B. 2011. Michigan Fruit Management Guide 2012. Extension Bulletin E-154. Michigan State University, East Lansing, MI.


Eastwell KC, Druffel KL. 2012. Complete genome organization of American hop latent virus and its relationship to carlaviruses. Arch Virol 157:14031406


Eastwell KC, Mekuria TA, Druffel KL. 2012. Complete nucleotide sequences and genome organization of a cherry isolate of cherry leaf roll virus. Arch Virol 157:761764


Alabi, O. J., Al Rwahnih, M., Karthikeyan, G., Poojari, S., Fuchs, M., Rowhani, A., and Naidu, R. A. 2011. Grapevine leafroll-associated virus 1 occurs as genetically diverse populations. Phytopathology 101: 1446-1456.


Rayapati, N.A., ONeil, S. and Walsh, D. 2011.Grapevine leafroll disease (la enfermedad del enrollamientode la hoja de parra) in Spanish (EB2027ES).


Naidu, R.A. 2011. Virus Diseases. In: 2011 Pest Management Guide for Grapes in Washington. WSU Extension Bulletin EB0762, pp.25-28.


Naidu, R.A. 2011. Virus update: The Status of Washington Vineyards. In: Viticulture and Enology Extension News Fall 2011.

You Tube Videos:

Grapevine Leafroll Disease Symptoms
(http://wine.wsu.edu/research-extension/grape-growing/plant-health/virology/; http://www.youtube.com/watch?v=Es41Tdgd9L0&NR=1&feature=endscreen)


Grapevine Disease: Be Clean, Stay Clean (http://www.youtube.com/watch?v=Vt_OyWpXohE&feature=related)


How Grapevine Virus Diseases Spread: 4 propagation methods https://www.youtube.com/watch?v=605YHdIeSC8

10/07/2013

1. Abou Ghanem-Sabanadzovic N., S. Sabanadzovic, P. Gugerli and A. Rowhani, 2012. Genome organization, serology and phylogeny of Grapevine leafroll-associated viruses 4 and 6: taxonomic implications. Virus Research 163: 120-128.


2. Alabi, O.J., Zheng, Y., Jagadeeswaran, G., Sunkar, R., and Naidu, R.A. 2012. High-throughput sequence analysis of small RNAs in grapevine (Vitis vinifera L.) affected by grapevine leafroll disease. Molecular Plant Pathology 13: 1060-1076.


3. Al Rwahnih, M., Sudarshana, M.R., Uyemoto, J.K., and Rowhani, A.. 2012. Complete genome sequence of a novel vitivirus isolated from grapevine J. Virol. 86:9545.


4. James, D., Varga, A. 2012. Sequence analysis of RNA 1 of lilac leaf chlorosis virus supports a close relationship to subgroup 3 ilarviruses. Archives of Virology. 157: 203-206.


5. Kanuya, E., Clayton, L.A., Naidu, R.A., and Karasev, A.V. 2012. First report of Grapevine fleck virus in Idaho grapevines. Plant Disease 96: 1705-1705.


6. Laney, A. G., Hassan, M. and Tzanetakis, I. E. 2012. An integrated badnavirus is prevalent in fig germplasm. Phytopathology 102: 1182-1189.


7. Li, R., Kinard, G., Mock, R., Forsline, P., Pooler, M., and Stover, E. 2012. A survey for viruses and virus-like pathogens in U.S. cherry genetic resources. Petria 22: 208220.


8. Lin, L., Li, R., Mock, R., and Kinard, G. 2012. One-Step multiplex RT-PCR for simultaneous detection of four pome tree viroids. European Journal of Plant Pathology 133: 765-772.


9. Martelli G.P., N. Abou Ghanem-Sabanadzovic, A.A. Agranovsky, M. Al Rwahnih, V.V. Dolja, C.I. Dovas, M. Fuchs, P. Gugerli, J.S. Hu, W. Jelkmann, N.I. Katis, V.I. Maliogka, M.J. Melzer, W. Menzel, M.E. Rott, A. Rowhani, S. Sabanadzovic & P. Saldarelli, 2012. Taxonomic revision of the family Closteroviridae with special reference to the grapevine leafroll-associated members of the genus Ampelovirus and the putative species unassigned to the family. Journal of Plant Pathology 94:7-19.


10. Martin, R.R., Polashock, J.J., and Tzanetakis, I.E. 2012. New and emerging viruses of blueberry and cranberry. Viruses 4: 2831-2852.


11. Melzer, M. J., Sether, D.M., Borth, W.B., and Hu, J.S. 2012. Characterization of a virus infecting Citrus volkameriana (Ten. & Pasq.) with citrus leprosis-like symptoms. Phytopathology 102: 122-127.


12. Melzer, M. J., Ayin, C., Sugano, J.S., Uchida, J.Y., Kawate, M.K., Borth, W.B., Sether, D,M., and Hu, J,S. 2013. Differentiation and distribution of Cordyline viruses 14 in Hawaiian plants (Cordyline fruticosa L.). Viruses 5:1655-1663.


13. Poudel, B., Sabanadzovic, S., Bujarski, J. and Tzanetakis I.E. 2012. Population structure of Blackberry yellow vein associated virus, an emerging crinivirus. Virus Research 169: 272275.


14. Schilder, A. 2012. Overview of grape diseases during the 2012 growing season. Michigan Grape and Wine Newsletter 2 (14): 4-5.


15. Schilder, A. 2012. Last chance to participate in grape virus diagnostic survey. Michigan Grape and Wine Newsletter 2 (13): 5.


16. Schilder, A. 2012. Recent observations of disease and other symptoms in grape vineyards. Michigan Grape and Wine Newsletter 2 (12): 3-4.


17. Schilder, A. 2012. Grape virus diagnostic support during the 2012 growing season. Michigan Grape and Wine Newsletter 2 (5): 5-6.


18. Sether, D.M., Melzer, M. J., Borth, W.B., and Hu, J.S. 2012. Characterization, Diversity, Distribution, and Transmission of a Pineapple Badnavirus in Commercial Pineapple Hybrids and Pineapple Germplasm Accessions in Hawaii. Plant Disease 96:1798-1804.


19. Sheveleva, A., Ivanov, P., Prihodko, Y., James, D.,and Chirkov, S. 2012. Occurrence and genetic diversity of Winona-like Plum pox virus isolates in Russia. Plant Disease 96:1135-1142.


20. Sheveleva, A., Ivanov, P., Prihodko, Y., James, D., and Chirkov, S. 2012. Plum pox virus W appears to be the most variable strain of the seven recognized strains of the virus. Petria 22: 226-232.


21. Wise, J. C., Gut, L. J., Isaacs, R., Schilder, A. M. C., Sundin, G. W., Zandstra, B., Hanson, E., and Shane, B. 2012. Michigan Fruit Management Guide 2013. Extension Bulletin E-154. Michigan State University, East Lansing, MI.


22. Abou Ghanem-Sabanadzovic, N., Tzanetakis, I.E., and Sabanadzovic, S. 2013. Rubus canadensis virus 1, a novel betaflexivirus identified in blackberry. Archives of Virology 158:445449.


23. Alabi, O.J., Poojari, S., Sarver, K., Martin, R.R., and Naidu, R.A. 2013. Complete Genome Sequence Analysis of an American isolate of Grapevine virus E. Virus Genes 46:563566.


24. Al Rwahnih, M., Daubert, S., Sudarshana, M.R. and Rowhani, A. 2013. Gene from a novel plant virus satellite from grapevine identifies a viral satellite lineage. Virus Genes 47: 114-118.


25. Al Rwahnih, M., Dave, A., Anderson, M. M., Rowhani, A., Uyemoto, J. K., and Sudarshana, M. R. 2013. Association of a DNA virus with grapevines affected by red blotch disease in California. Phytopathology 103:1069-1076.


26. Bahder, B. W., Alabi, O., Poojari, S., Walsh, D. B., and Naidu, R. A. 2013. A survey for grapevine viruses in Washington State Concord (Vitis × labruscana L.) vineyards. Online. Plant Health Progress doi:10.1094/PHP-2013-0805-01-RS.


27. Dhekney S.A., Vardiman J., Brock B., Fisher L., Kandel, R., Bergey D. 2013. Optimizing tissue culture protocols for cold-hardy grape cultivars and rootstocks. University of Wyoming, Agricultural Experiment Station, Field Days Bulletin, 113-115.


28. Dhekney S.A., Vardiman J., Brock B., Fisher L., Kandel, R., Bergey D. 2013. Production of disease-free grapevines using tissue culture technology. University of Wyoming, Agricultural Experiment Station, Field Days Bulletin, 117-118.


29. Dhekney S.A., Vardiman J., Kandel, R., Smith D. 2013. Screening grapevine cultivars for adaptability to soil and climatic factors in Wyoming. University of Wyoming, Agricultural Experiment Station, Field Days Bulletin, 119-120.


30. Finn, C.E., Moore, P.P., Yorgey, B.M., Strik, B.C., Kempler, C., Dossett, M. and Martin, R.R. 2013. Charm strawberry. HortScience (Accepted July 3, 2103).


31. James, D., Varga, A., and Sanderson, D. 2013. Genetic diversity of Plum pox virus: strains, disease and related challenges for control. Canadian Journal of Plant Pathology DOI:10.1080/07060661.2013.828100.


32. James, D., Varga, A., Jesperson, G.D., Navratil, M., Safarova, D., Constable, F., Horner, M., Eastwell, K., and Jelkmann, W. 2013. Identification and complete genome analysis of a virus variant or putative new foveavirus associated with apple green crinkle disease. Archives of Virology 158:1877-1887.


33. James, D., Sanderson, D., Varga, A., Sheveleva A., and Chirkov, S. 2013. Comparison of Plum pox virus strain W isolates to determine their relationships and further understand their genetic diversity. 2nd International Symposium on Plum Pox Virus, Olomouc Czech Republic, September 3  6, 2013. Book of Abstracts. Pg 14. (Abstr.).


34. James, D., Sanderson, D., Varga, A., Greig, N., and Stobbs, L. 2013. Relationships and genetic diversity of selected Canadian isolates of Plum pox virus. 2nd International Symposium on Plum Pox Virus, Olomouc Czech Republic, September 3  6, 2013. Book of Abstracts. Pg 15 (Abstr.).


35. Maree, H.J., Almeida, R.P., Bester, R., Chooi, K., Cohen, D., Dolja, V.V., Fuchs, M.F., Golino, D.A., Jooste, A.E., Martelli, G.P., Naidu, R.A., Rowhani, A., Saldarelli, P., and Burger, J. 2013. Grapevine leafroll-associated virus 3. Frontiers in Microbiology 4:82.


36. Martin, R.R. and Tzanetakis, I.E. 2013. High risk strawberry viruses by region in the United States and Canada: Implications for certification, nurseries and fruit production. Plant Disease 97: 1358-1362.


37. Martin, R.C., Glover-Cutter, K., Martin, R.R. and Dombrowski, J.E. 2013. Virus induced gene silencing in Lolium temulentum. Plant Cell Tissue Organ Cult. 113:163-171. DOI 10.1007/s11240-012-0257-z.


38. Martin, R.R., MacFarlane, S., Sabanadzovic, S., Quito-Avila, D.F., Poudel, B., and Tzanetakis, I.E. 2013. Viruses and virus diseases of Rubus. Plant Disease 97:168-182.


39. Mekuria, T., Druffel, K.L., Susaimuthu, J., and Eastwell, K,C. 2013. Complete nucleotide sequence of a strain of Cherry mottle leaf virus associated with peach wart disease in peach. Archives of Virology. DOI 10.1007/s00705-013-1698-3.


40. Mekuria, T., Smith, T.J., Beers, E.H., and Eastwell, K.C. 2013. Little cherry virus 2 is transmitted to sweet cherry by Pseudococcus maritimus (Ehrhorn), a new vector of this virus. Plant Disease 97:851.


41. Melzer, M.J., Sugano, J.S., Uchida, J.Y., Kawate, M.K., Borth, W.B., Sether, D.M., Hu, J.S. 2013. Molecular characterization of closteroviruses infecting Cordyline fruticosa (L.) in Hawaii. Frontiers in Microbiology doi: 10.3389/fmicb.2013.00039.


42. Melzer, M.J., Nelson Simbajon, N., Carillo, J., Borth, W.B., Freitas-Astúa, J., Kitajima, EW, Neupane, K.R., and Hu, J.S. 2013. A cilevirus infects ornamental hibiscus in Hawaii. Arch. Virol. Doi:10.1007/s00705-013-1745-0


43. Pallas, V.,Aparicio, F., Herranz , M.C., Sanchez-Navarro, J.A., and Scott, S.W. 2013. The Molecular Biology of ilarviruses. Advances in Virus Research 87:139 -182.


44. Peres, N.A., Whidden, A., Smith, H. and Martin, R.R. 2013. Aphid-borne viruses detected in strawberry plants shipped to Florida. Berry and Vegetable Times, Jan 2013, Pp5-6, Univ of Florida IFAS Extension.


45. Poojari, S., Alabi, O.J., Fofanov, V.Y., and Naidu, R.A. 2013. A leafhopper-transmissible DNA virus with novel evolutionary lineage in the family Geminiviridae implicated in grapevine redleaf disease by next-generation sequencing. PLoS ONE 8(6): e64194.


46. Poudel, B., Wintermantel, W.M., Cortez, A.A., Ho, T., Khadgi, A. and Tzanetakis, I.E. 2013. Epidemiology of Blackberry yellow vein associated virus. Plant Disease 97: 1352-1357.


47. Poudel, B., and Tzanetakis I.E. 2013. Population structure of blackberry chlorotic ringspot virus in the United States. Archives of Virology 158: 667-672.


48. Quito-Avila, D.F., Brannen, P.M., Cline, W.O., Harmon, P.F. and Martin, R.R. 2013. Genetic characterization of Blueberry necrotic ring blotch virus, a novel RNA virus with unique genetic features. J. Gen. Virol. 94:1426-14343.


49. Quito-Avila, D.F., Ibarra, M.A., Alvarez, R.A., Espinoza, L., Ratti, M.F., Peralta, E.L. and Martin, R.R. 2013. First report of Raspberry bushy dwarf virus in the Andean blackberry (Rubus glaucus) in central Ecuador. Plant Dis. 97:1003.


50. Rojas, P., Almada, R.D., Sandoval, C., Keller, K.E., Martin, R.R. and Caligari, P.D.S. 2013. Occurrence of aphidborne viruses in southernmost South American populations of Fragaria chilensis ssp. chiloensis. Plant Pathology 62:428-435.


51. Skinkis, P., Pscheidt, J., Peachy, E., Dreves, A., Walton, V., Sanchez, D., Zasada, I. and Martin, R.R. 2013. Pest Management Guide for Wine Grapes in Oregon. Oregon State Univ. Ext. Bull.

52. Villamor, D.E., Druffel, K.L., and Eastwell, K.C. 2013. Complete nucleotide sequence of a virus associated with rusty mottle disease of sweet cherry (Prunus avium). Archives of Virology 158:18051810.


53. Tzanetakis, I.E. and Martin, R.R. 2013. Expanding field of strawberry viruses which are important in North America. Intern. J. Fruit Sci. 13:184195.


54. Tzanetakis I.E., Martin, R.R., and Wintermantel W.M. 2013. Epidemiology of criniviruses, an emerging problem in world agriculture. Frontiers in Microbiology 4:119.

06/25/2014

Abou Ghanem-Sabanadzovic N., Tzanetakis, I.E. and Sabanadzovic, S. 2013. Rubus canadensis virus 1, a novel betaflexivirus identified in blackberry. Archves of Virology 158: 445-449.

Al Rwahnih, M., Daubert, S., Sudarshana, M., and Rowhani, A. 2013. Gene from a novel plant virus satellite from grapevine identifies a viral satellite lineage. Virus Genes 47: 114-118.

Al Rwahnih, M., Dave, A., Anderson, M., Rowhani, A., Uyemoto, J. K., and Sudarshana, M. 2013. Association of a DNA virus with Grapevines affected by Red 1 Blotch disease in California. Phytopathology 103:1069-76.

Al Rwahnih, M., S. Daubert, C. Islas, D.A. Golino, and A. Rowhani. 2014. Description of a fifth Vitivirus in grapevine. Journal of Plant Pathology. 96: 219-222.

Alabi, O. J., Al Rwahnih, M., Mekuria, T. A., Rowhani, A., and Naidu, R. A. 2014. Genetically diverse isolates of Grapevine virus A are present in Washington and California vineyards. Phytopathology. 104: 548-560

Alabi, O.J., Al Rwahnih, M., Mekuria, T., and Naidu, R.A. 2014. Genetic diversity of Grapevine virus A in Washington and California vineyards. Phytopathology 104:548-560.

Bahder, B.W., Naidu, R.A., Daane, K.M., Millar, J.G., and Walsh, D.B. 2013. Pheromone-based monitoring of Pseudococcus maritimus (Hemiptera: Pseudococcidae) populations in Concord grape vineyards. Journal of Economic Entomology 106:482-490.

Bahder, B. W., Poojari, S., Alabi, O.J., Naidu, R.A., and Walsh, D. B. 2013. Pseudococcus maritimus (Hemiptera: Pseudococcidae) and Parthenolecanium corni (Hemiptera: Coccidae) are capable of transmitting Grapevine leafroll-associated virus 3 between Vitis labruscana and Vitis vinifera. Environmental Entomology 42: 1292-1298.

Dhekney S.A., Kandel, R., Garcia y Garcia A. 2014. University of Wyoming-Grape Growers Partnership may Improve Sustainable Grape Production in Wyoming. University of Wyoming, Agricultural Experiment Station, Field Days Bulletin, In Press.

Doan, H.K., Zhang, S. and Davis, M.R. 2014. Development and Evaluation of AmplifyRP Acceler8 Diagnostic Assay for the Detection of Fusarium oxysporum f. sp. vasinfectum Race 4 in Cotton. Plant Health Progress 15(1):48-52.

Ghimire., P., Abou Ghanem-Sabanadzovic, N., Tzanetakis, I.E. and Sabanadzovic, S. 2013. Partial characterization of a novel flexivirus from blackberry. 90th Meeting of the Southern Division of the American Phytopathological Society, February 8-10, 2013, Baton Rouge, LA

Golino, D.A., Rowhani, A. and Uyemoto, J.K. 2013. “Grapevine Virus Diseases”. In : Grape Pest Management, third edition. Pp: 157-173. Ed: Larry J. Bettiga, University of California, Agriculture and Natural Resources publication #3343.

Gray, D.J., Li, Z.T. and Dhekney, 2014. S.A. Precision breeding of grapevine (Vitis vinifera L.) for improved traits. Plant Science, http://dx.doi.org/10.1016/j.plantsci.

Hintz, W.E., Carneiro, J.S., Kassatenko, I., Varga, A., and James, D. 2013. Two novel mitoviruses from a Canadian isolate of the Dutch elm pathogen Ophiostoma novo-ulmi (93-1224). Virology Journal 10:252.

James, D. 2013. Challenges and benefits of standardized diagnostic protocols – International Plant Protection Convention’s perspective. Symposium on “Science and Technology Tools Supporting Phytosanitary Work”, 37th NAPPO Annual Meeting, Guelph, Ontario, Canada, October 31, 2013. Book of Abstracts. (Abstr.).

James, D., Sanderson, D., Varga, A., Greig, N., and Stobbs, L. 2013. Relationships and genetic diversity of selected Canadian isolates of Plum pox virus. 2nd International Symposium on Plum Pox Virus, Olomouc Czech Republic, September 3 – 6, 2013. Book of Abstracts. Pg 15 (Abstr.).

James, D., Sanderson, D., Varga, A., Sheveleva A., and Chirkov, S. 2013. Comparison of Plum pox virus strain W isolates to determine their relationships and further understand their genetic diversity. 2nd International Symposium on Plum Pox Virus, Olomouc Czech Republic, September 3 – 6, 2013. Book of Abstracts. Pg 14. (Abstr.)

James, D., Varga, A., and Sanderson, D. 2013. Genetic diversity of Plum pox virus: strains, disease and related challenges for control. Canadian Journal of Plant Pathology 35(4):431-441.

Leal I., Allen, E., Anema, J., Reisle, C., Foord, B., Uzunovic, A., Varga, A., and James, D. 2013. Development of a reverse transcription loop-mediated isothermal amplification (RT-LAMP) method to detect living pinewood nematode, Bursaphalenchus xylophilus, in wood. In:Schroder, T (ed), Pine Wilt Disease Conference 2013, Brunschweig, Germany, ISSN: 1866-590X, pp 39-40.

Leal I., Allen, E., Reisle, C., Anema, J., Uzunovic, A., Varga, A., and James, D. 2013. Development of a reverse transcription loop-mediated isothermal amplification (RT-LAMP) method to detect living pinewood nematode, Bursaphalenchus xylophilus, in wood. Canadian Journal of Plant Pathology. (Abstr.) 35(1):92.

Lu, Q., Abou Ghanem-Sabanadzovic, N., Ghimire, G., Tzanetakis, I.E., Lawrence, A. and Sabanadzovic, S. 2013. New marafivirus identified ib yellow vein disease-affected blackberries. Abstracts Annual Meeting of the American Phytopathological Society, Austin, TX, USA. Phytopathology 103: S2.87

Mekuria, T.A,, Zhang S. and Eastwell, K.C. (2014) Rapid and sensitive detection of Little cherry virus 2 using isothermal reverse transcription-recombinase polymerase amplification. Journal of Virological Methods 205:24-30.

Melzer M.J., Ayin, C., Sugano, J.S., Uchida, J.Y., Kawate, M.K., Borth, W.B., Sether, D.M. and Hu, J.S. 2013. Differentiation and Distribution of Cordyline Viruses 1–4 in Hawaiian ti Plants (Cordyline fruticosa L.). Viruses 5:1655-1663.

Melzer, M.J., Nelson Simbajon, N., Carillo, J., Borth, W.B., Freitas-Astúa, J., Kitajima, E.W., Neupane, K.R. and Hu, J.S. 2013. A cilevirus infects ornamental hibiscus in Hawaii. Archives of Virology doi:10.1007/s00705-013-1745-0

Osman, F., Al Rwahnih, M. and Rowhani, A. 2013. Improved Detection of Ilarviruses and Nepoviruses Affecting Fruit Trees Using Quantitative PCR. Journal of Plant Pathology (in press).

Osman, F., Hodzic, E., Omanska-Klusek, O., Olineka, T. and Rowhani, A. 2013. Development and validation of a multiplex quantitative PCR assay for the rapid detection of Grapevine virus A, B and D. Journal of Virological Methods 194:138-145.

Poojari, S., Alabi, O.J., and Naidu, R.A. 2013. Molecular characterization and impacts of a strain of Grapevine leafroll-associated virus 2 causing asymptomatic infection in a wine grape cultivar. Virology Journal 10:324.

Poudel, B., Ho, T., Laney, A., Khadgi, A. and Tzanetakis, I.E. 2014. Epidemiology of Blackberry chlorotic ringspot virus. Plant Disease 98:547-550.

Sabanadzovic S. and Abou Ghanem-Sabanadzovic, N. 2013. Cryptic viruses in the flora of the Great Smoky Mountains National Park. Abstracts Annual Meeting of the American Phytopathological Society, Austin, TX, USA. Phytopathology 103: S2.125

Thekke-Veetil, T., Aboughanem Sabanadzovic, N., Keller, K.E., Martin, R.R., Sabanadzovic S. and Tzanetakis, I.E. 2013. Molecular characterization and population structure of Blackberry vein banding associated virus, new ampelovirus associated with yellow vein disease. Virus Research 178: 234-240.

Thekke-Veetil, T., Ho, T., Keller, K.E., Martin, R.R. and Tzanetakis, I.E. 2014. A new ophiovirus associated with blueberry mosaic disease. Virus Research 189: 92-96.

Villamor, D.E.V, Ward, K.F., Collman, S.J. and Eastwell, K.C. 2014. First report of infection of cherry rusty mottle associated virus in Portuguese Laurel (Prunus lusitanica) in Washington State. Plant Disease 98: 699.

Villamor, D.E. and Eastwell. K.C. 2013. Viruses associated with cherry twisted leaf and the rusty mottle group of diseases of sweet cherry represent distinct species within the family Betaflexiviridae. Phytopathology 103:1287-1295.

Zhang S, Russell P, McOwen N, Bohannon S and Vrient A. 2014. AmplifyRP Acceler8 – a rapid isothermal test for plum pox virus using reverse transcription-recombinase polymerase amplification (Abstract). American Phytopathological Society Annual Meeting, August 2014, St. Paul, Minnesota.

Video Presentations

Deborah Golino, UCDavis, “Red Blotch Status of the FPS Classic Foundation and the Russell Ranch Foundation” http://lecture.ucanr.org/Mediasite/Play/486e1db1ad5348eaada05ed570cc8c971d

Marc Fuchs, Cornell UNIVERSITY “Red Blotch: Challenges and Opportunities” http://lecture.ucanr.org/Mediasite/Play/7e6250539e5e4676ad4cd8880c51164c1d

 

11/25/2015

Akinbade SA, Mojtahedi H, Guerra L, Eastwell K, Villamor DEV, Handoo ZA, Skantar AM. 2014. First Report of Xiphinema rivesi (Nematoda, Longidoridae) in Washington State. Plant Disease 98: 1018.

Al Rwahnih, M., Rowhani, A., Golino, D., Islas, C., Preece, J., and Sudarshana, M.R. 2014. Detection and genetic diversity of Grapevine red blotch-associated virus isolates in table grape accessions in the National Clonal Germplasm Repository in California. Can. J. Plant Pathology 37:130–135.

Al Rwahnih, M., Daubert, S., Golino, D., Islas, C., and Rowhani, A. 2015. Comparison of Next Generation Sequencing vs. Biological Indexing for the Optimal Detection of Viral Pathogens in Grapevine. Phytopathology, in press.

Al Rwahnih, M., Rowhani, A., and Golino, D. First Report of Grapevine red blotch-associated virus in archival grapevine material from Sonoma County, California. Plant Disease, in press.

Al Rwahnih, M., Daubert, S., Golino, D., Durvasula, A., and Rowhani, A. 2015. Description and Detection of a novel Reovirus species in Cabernet grapevine in California. APS meeting, Pasadena CA, August 1-15, 2015.

Al Rwahnih, M., Daubert, S., Golino, D., and Rowhani, A. 2015. Next Generation Sequencing for the optimal detection of viral pathogens in Grapevine. APS meeting, Pasadena CA, August 1-15, 2015.

Al Rwahnih, M., Daubert, S., Golino, D., and Rowhani, A. Characterization of a Novel Reovirus Species in Cabernet Grapevine in California. Proceedings of the 18th Congress of ICVG, Ankara, Turkey. September 7-11, 2015

Al Rwahnih, M., Daubert, S., Golino, D., and Rowhani, A. Next-Generation Sequencing poised to replace Biological Indexing as the Gold Standard for Virus Detection in Grapevine. Proceedings of the 18th Congress of ICVG, Ankara, Turkey. September 7-11, 2015.

Al Rwahnih, M., Daubert, S., Islas, C., Golino, D. and Rowhani, A. 2014. Characterization of a fifth vitivirus in grapevine. J. Plant Pathol. 96: 219-222.

Alvarez, R.A., Martin, R.R. and Quito-Avila, D.F. 2015. First report of Pineapple mealybug wilt associated virus-1 in Ecuador. Plant Pathology 31:15.

Bag, S., Al Rwahnih, Li, A., Gonzalez, A., Rowhani, A., Uyemoto, J.K., and Sudarshana, M.R. 2015. Detection of a new luteovirus in imported nectarine trees: A case study to propose adoption of metagenomics in post-entry quarantine. Phytopathology 105:840-846.

Cao, Mengji, Lingling Pu, Margarita Bateman, Gary Kinard, Changyong Zhou and Ruhui Li. Simultaneous identification and molecular characterization of viruses associated with an apple tree. 2015. Abstract presented at the ICVF meeting in Japan, June 8-12, 2015

Cheong, Eun Ju, Chan-Soo Kim, Gary Kinard and Ruhui Li, 2015, Evaluation of the virus and viroid infection status of flowering cherry (Prunus yedoensis) collections in Korea and the U.S. J. Plant Path. 97: 155-160.

Cheong, Eun Ju, Ae Rin Jeon, Ray Mock, Gary Kinard and Ruhui Li. 2014. Elimination of Gooseberry vein banding associated virus by in vitro therapy. USDA-ARS-NGRL- PDRU-TT/2014-1.

Cheong, Eun Ju, Ae Rin Jeon, Jun Won Kang, Ray Mock, Gary Kinard and Ruhui Li. 2014. In vitro Elimination of Black raspberry necrosis virus from black raspberry (Rubus occidentalis). Hort. Sci. 41: 95–99.

Cheong, Eun Ju, Gary Kinard and Ruhui Li. 2014. Effect of carbohydrate sources on in vitro shoot growth of various Prunus species. USDA-ARS-NGRL-PDRU-TT/2014-3.

Dey, KK, Borth, WB, Melzer, MJ, Hu, JS. 2015. Application of circular polymerase extension cloning to generate infectious clones of a plant virus. Journal of Applied Biotechnology 3:34-44

Dey, K, Borth, W, Melzer, M, Wang, ML, Hu JS. 2015. Analysis of Pineapple mealybug wilt associated virus -1 and -2 for potential RNA silencing suppressors and pathogenicity factors. Viruses 7:969-995

Diaz-Lara, A., Mosier, N.J., Keller, K.E. and Martin, R.R. 2015. A variant of Rubus yellow net virus with altered genomic organization. Virus Genes 50:104-110.

Finn, C.E., Strik, B.C., Yorgey, B. and Martin, R.R. 2013. ‘Vintage’ red raspberry. HortScience 48:1181-1183.

Finn, C.E., Moore, P.P., Yorgey, B.M., Strik, B.C., Kempler, C., Dossett, M. and Martin, R.R. 2013. ‘Charm’ strawberry. HortScience 48:1184-1188.

Finn, C.E., Strik, B.C., Yorgey, B.M., Moore, P.P., Dossett, M., Kempler, C., Martin, R.R., Jamieson, A.R. and Galletta, G.J. 2014. ‘Sweet Sunrise’ strawberry. HortScience accepted 6.11.14

Fuchs, M., Marsella-Herrick, P., Hessler, S., Martinson, T. and Loeb, G. 2015. Seasonal acquisition of viruses by the grape mealybug, Pseudococcus maritimus (Erhorn), in a leafroll-diseased vineyard. Journal of Plant Pathology, in press.

Gergerich, R.C., Welliver, R., Gettys, S., Osterbauer, N.K., Kamenidou, S., Martin, R.R., Golino, D., Eastwell, K., Fuchs, M., Vidalakis, G. and Tzanetakis, I.E. 2015. Safeguarding fruit crops in the age of agricultural globalization. Plant Disease 99: 176- 187.

Golino, D., Rowhani, A., Klaassen, V., Sim, S., and Al Rwahnih, M. Grapevine Leafroll Associated Virus 1 Effects on Different Grapevine Rootstocks. Proceedings of the 18th Congress of ICVG, Ankara, Turkey. September 7-11, 2015.

Gottula, J., Lewis, R. Saito, S. and Fuchs, M. 2014. Allopolyploidy and the evolution of plant virus resistance. BMC Evolutionary Biology, 14:149.

Ho, T. and Tzanetakis, I.E. 2014. Developing a virus detection and discovery pipeline using next generation sequencing. Virology 471-473:54-60

James, D. 2014. Plum pox (Sharka); the disease and variability of the virus. University of California Plum Pox International Meeting, September 29 - October 1, 2014. UC-Davis, Davis, California, USA. http://ucanr.edu/sites/plumpox2014/Abstracts/James_Plum_pox_virus_variability/

James, D., Varga, A., Lye, D. 2014. Analysis of the complete genome of a virus associated with twisted leaf disease of cherry reveals evidence of a close relationship to unassigned viruses in the family Betaflexiviridae. Archives of Virology. 159: 2463-2468.

James, D., Phelan, J., Varga, A., Rott, M., Berube, J.A. 2015. First Report of Rose Cryptic Virus 1 in Rosa Plants in Canada. Plant Disease. 99: 558.

James, D. 2014. Plum pox virus (PPV) detection: the standardized IPPC diagnostic protocol. University of California Plum Pox International Meeting, September 29 - October 1, 2014. UC-Davis, Davis, California, USA. http://ucanr.edu/sites/plumpox2014/Abstracts/James_Plum_pox_virus_detection/

James, D., Green, C., and Wierenga, E. 2014. Plum Pox Monitoring and Management Program (PPMMP) in Canada. University of California Plum Pox International Meeting, September 29 - October 1, 2014. UC-Davis, Davis, California, USA. http://ucanr.edu/sites/plumpox2014/Abstracts/James_et_al_Program_in_Canada/

James, D., Phelan J. 2015. Detection and analysis of a filamentous virus isolated from black currant (Ribes nigrum cv. Baldwin) showing symptoms of leaf chlorosis and deformity. 23rd International Conference on Virus and Other Graft Transmissible Diseases of Fruit Crops, Morioka City, Japan, June 8 – 12, 2015. Book of Abstracts. Pg 67 (Abstr.).

James, D., Sanderson, D., Varga, A., Greig, N. and Stobbs, L.W. 2015. Analysis of the genetic diversity and relationships of selected Canadian isolates of Plum pox virus. Acta Hort. (ISHS) 1063:33-40.

James, D., Sanderson, D., Varga, A., Sheveleva, A., Chirkov, S. 2015. Recombination events may play an important role in the evolution of Plum pox virus (PPV). 23rd International Conference on Virus and Other Graft Transmissible Diseases of Fruit Crops, Morioka City, Japan, June 8 – 12, 2015. Book of Abstracts. Pg 52 (Abstr.).

Jinbo Song; Eric P. Benson; Patricia A. Zungoli; Patrick Gerard; Simon W. Scott. 2015. Using the DAS-ELISA test to establish an effective distance between bait stations for control of Linepithema humile (Hymenoptera: Formicidae) in natural areas. Journal of Economic Entomology doi: 10.1093/jee/tov152

Jones, T.J., Naidu, R.A., and Nita, M. 2015. Occurrence of Grapevine leafroll associated virus- 2, ?3 and Grapevine fleck virus in Virginia, U.S.A., and factors affecting virus infected vines. European Journal of Plant Pathology 142: 209-222.

Kalinowska, E., Marsella-Herrick, P. and Fuchs, M. 2015. Genetic variability of Blueberry scorch virus isolates from highbush blueberry in New York. Archives of Virology, 160:1537-1542.

Krenz, B., Thompson, J.R., McLane, H.L., Fuchs, M. and Perry, K.L. 2014. Grapevine red blotch-associated virus is widespread in the United States. Phytopathology, 104:1232- 1240.

Leal, I., Allen, E., Foord, B., Anema, J., Reisle, C., Uzunovic, A., Varga, A., James, D. 2014. Detection of living Bursaphelenchus xylophilus in wood, using reverse transcriptase loop-mediated isothermal amplification (RT-LAMP). Forest Pathology. 45: 134-148.

Lin, Liming, Ruhui Li, Ray Mock and Gary Kinard. 2014. Simultaneous Detection and Differentiation of Four Pome Viroids by RT-PCR. USDA-ARS-NGRL-PDRU-TT/2014- 2.

Long, MH, Ayin, C, Li, R, Hu, JS, Melzer, MJ. 2014. First report of taro vein chlorosis virus infecting taro [Colocasia esculenta (L.) Schott] in the United States of America. Plant Disease 98:1160

Martin, R.R. and Tzanetakis I.E. 2014. Control of virus diseases of berry crops. Advances in Virus Research 91:44-81.

Martin, R.R. and Tzanetakis, I.E. 2013. High risk strawberry viruses by region in the United States and Canada: Implications for certification, nurseries and fruit production. Plant Dis. 97:1358-1362.

Martin, R.R. and Tzanetakis I.E. 2015. Control of virus diseases of berry crops. Advances in Virus Research 91:271-309.

Mekuria, TA, Zhang S, Eastwell KC. 2014. Rapid and sensitive detection of Little cherry virus 2 using isothermal reverse transcription-recombinase polymerase amplification. Journal of Virological Methods 205:24-30.

Melzer MJ, Shimabukuro, JK., Long, M., Nelson, S., Alvarez, A., Borth, WB, Hu, JS. First report of Capsicum chlorosis virus infecting waxflower (Hoya calycina Schlecter) in the United States of America. 2014 Plant Disease 98:1160.

Moore, P.P., Barritt, B., Sjulin, T., Robbins, J.A., Finn, C.E., Martin, R.R. and Dossett, M. 2014. ‘Cascade Gold’ raspberry. HortScience 49:358-460.

Moore, P.P., Hoashi-Erhardt, W., Finn, C.E., Martin, R.R. and Dossett, M. 2015. ‘Cascade Harvest’ red raspberry. HortScience 50:24-627.

Naidu, R.A., 2014. Grapevine viruses and clean plants. In: Vine to Wine DVD. Edited by Gwen Hoheisel and Michelle Moyer (in press).

Naidu, R.A. 2014. Virus Diseases. In: 2015 Pest Management Guide for Grapes in Washington. WSU Extension Bulletin EB0762, pp.28-31.

Naidu, R.A., Maree, H.J., and Burger, J. 2015. Grapevine leaf roll disease and associated viruses – A unique pathosystem. Annual Review of Phytopathology 53 (in press).

Naidu, R.A., Rowhani, A., Fuchs, M., Golino, D., and Martelli, G.P. 2014. Grapevine leafroll: A complex viral disease affecting a high-value fruit crop. Plant Disease 98:1172-1185.

Naidu, R.A., Scharlau, V. 2014. Why ‘clean’ plants – Fact sheet (4 pages). Naidu, R.A. and Walsh, D. 2015. Is ‘grape virus tax’ hitting your pocketbook? Good Fruit Grower May 15, 2015. Vol. 66, No. 10, pages 10-11.

Osman, F., Al Rwahnih, M. and Rowhani, A. 2014. Improved detection of ilarviruses and nepoviruses affecting fruit trees using quantitative RT-qPCR. 2014. J. Plant Pathol. 96:577-583.

Postman, J.D. and H.R. Cameron. 1987. Apple mosaic virus in U.S. filbert germplasm. Plant Disease 71:944-945.

Postman, J.D. and S.A. Mehlenbacher. 1994. Apple mosaic virus in hazelnut germplasm. Acta Horticulturae 351:601-609.

Poudel, B., Ho, T., Laney, A., Khadgi, A. and Tzanetakis, I.E. 2014. Epidemiology of Blackberry chlorotic ringspot virus. Plant Disease 98:547-550.

Quito-Avila, D., Alvarez, R.A. and Martin, R.R. 2015. An umbra-like virus of papaya discovered in Ecuador: detection, occurrence and phylogenetic relatedness. EJPP (Dec. 9, 2014)

Quito-Avila, D.F., Brannen, P.M., Cline, W.O., Harmon, P.F. and Martin, R.R. 2013. Genetic characterization of Blueberry necrotic ring blotch virus, a novel RNA virus with unique genetic features. J. Gen. Virol. 94:1426-1434.

Quito-Avila, D.F., Ibarra, M.A., Alvarez, R.A., Espinoza, L., Ratti, M.F., Peralta, E.L. and Martin, R.R. 2013. First report of Raspberry bushy dwarf virus in the Andean blackberry (Rubus glaucus) in central Ecuador. Plant Dis. 97:1003.

Quito-Avila, D.F, Lightle, D. and Martin, R.R. 2014. Effect of Raspberry bushy dwarf virus, Raspberry leaf mottle virus, and Raspberry latent virus on plant growth and fruit crumbliness in ‘Meeker’ red raspberry. Plant Dis. 98:176-183.

Quito-Avila, D.F., Peralta, E.L., Ibarra, M.A., Alvarez, R. and Martin, R.R. 2014. A Raspberry bushy dwarf virus isolate from Ecuadorean Rubus glaucus contains an additional RNA that is a rearrangement of RNA 2. Arch. Virol. 159:2519-2521.

Rayapati, N., Rowhani, A., Fuchs, M., Golino, D. and Martelli, G.P. 2014. Grapevine leafroll: a complex viral disease affecting a high-value fruit crop. Plant Dis. 98: 1172-1185.

Ricketts, K.D., Gomez, M.I., Atallah, S.S., Fuchs. M.F., Martinson, T., Smith, R.J., Verdegaal, P.S., Cooper, M.L., Bettiga, L.J. and Battany, M.C. 2015. Reducing the economic impact of grapevine leafroll disease in California: identifying optimal management practices. American Journal of Enology and Viticulture, 66:138-147.

Rott, Michael, Mark Belton, Ian Boyes, Heidi Rast. Development of Next Generation Sequencing methods for plant virus diagnostics in grapevine and tree fruits. 11th International Conference of the European Foundation for Plant Pathology, Krakow, Sept 8-13, 2014.

Rott, Michael, Yurit Xiang, Michael Bernardy, Mark Belton, Ian Boyes, Heidi Rast, Cindy Tu, Edward Clarke, Bari Befeh Aadum. Analysis of Grapevine and Tree Fruit virus collections using Next Generation Sequencing. 11th International Conference of the European Foundation for Plant Pathology, Krakow, Sept 8-13, 2014.

Rowhani, A., Golino, D., Klaassen, V., Sim, S., Gouran, M., and Al Rwahnih, M. Grapevine Leafroll Associated Virus 3: Effects on Rootstocks, Vine Performance, Yield and Berries. Proceedings of the 18th Congress of ICVG, Ankara, Turkey. September 7-11, 2015.

Roy, A., Hartung, JS, Schneider, WL, Shao, J, Leon, MG, Melzer, MJ, Beard, JJ, Otero-Colina, G, Bauchan, GR, Ochoa, R, and Brlansky, RH. 201X. Role bending: complex relationships between viruses, hosts, and vectors related to citrus leprosis, and emerging disease. Phytopathology (in press).

Scott, S.W., MacFarlane, S.A. McGavin, W.J. and Fargette, D. 2014. Cassava Ivorian Bacilliform virus is a member of the genus Anulavirus. Archives of Virology 159: 159:2791–2793

Seguin, J., Rajeswaran, R., Malpica-López, N., Martin, R.R., Kasschau, K., Dolja, V.V., Otten, P., Farinelli, L. and Pooggin, M.M. 2014. De novo reconstruction of plant RNA and DNA virus quasispecies from siRNAs. PLoS One at http://dx.plos.org/10.1371/journal.pone.0088513

Skinkis, P., Pscheidt, J., Peachy, E., Dreves, A., Walton, V., Sanchez, D., Zasada, I. and Martin, R.R. 2014. Pest Management Guide for Wine Grapes in Oregon. Oregon State Univ. Ext. Bull. http://ir.library.oregonstate.edu/xmlui/bitstream/handle/1957/45975/em8413.pdf

Sudarshana, M.R., Perry, K.L., and Fuchs, M.F. 2015. Grapevine red blotch-associated virus, an emerging threat to the grapevine industry. Phytopathology 105: (In print).

Thekke-Veetil, T., Ho, T., Keller, K.E., Martin, R.R. and Tzanetakis, I.E. 2014. A new ophioivirus is associated with blueberry mosaic disease. Virus Research 189:92-96.

Thekke-Veetil, T., Ho, T., Keller, K.E., Martin, R.R. and Tzanetakis, I.E. 2014. A new ophiovirus associated with blueberry mosaic disease. Virus Research 189: 92-96.

Thompson, J.R., Fuchs, M., McLane, H., Toprak-Celebi, F., Fischer, K., Potter, J. and Perry, K.L. 2014. Profiling viral infections in grapevine using a randomly primed reverse transcription-polymerase chain reaction/macroarray multiplex platform. Phytopathology, 104:211-219.

Tzanetakis, I.E., Martin, R.R. and Wintermantel, W.M. 2013. Epidemiology of criniviruses, an emerging problem in world agriculture. Front. Microbiol. 4:119:1-15. doi: 10.3389/fmicb.2013.00119 Accepted April 26, 2013

Thekke-Veetil, T., Polashock, J.J., Marn, M.V., Plesko, I.M., Schilder, A.C., Keller, K.E., Martin, R.R. and Tzanetakis, I.E. 2015. Population structure of blueberry mosaic associated virus: Evidence of reassortment in geographically distinct isolates. Virus Research 201: 79-84.

Thekke-Veetil, T., Polashock, J., Marn, M.V., Plesko, I.M., Schilder, A., Keller, K.E., Martin, R.R. and Tzanetakis, I.E. 2015. Population structure of blueberry mosaic associated virus: Evidence of genetic exchange in geographically distinct isolates. Virus Res. 201:79-84.

Thekke-Veetil, T., Sabanadzovic, N. A-G., Keller, K.E., Martin, R.R., Sabanadzovic, S. and Tzanetakis, I.E. 2013. Molecular characterization and population structure of Blackberry vein banding associated virus, a new ampelovirus associated with blackberry yellow vein disease. Virus Res. 178:234-240.

Villamor DEV, Susaimuthu J, Eastwell KC. 2015. Genomic analyses of cherry rusty mottle group and cherry twisted leaf associated viruses reveal a possible new genus within the family Betaflexiviridae. Phytopathology 105:399-408.

Walker, L., Bagewadi, B., Schultz, A., and Naidu, R.A. 2015. First report of Tobacco ringspot virus associated with fanleaf disease in a Washington State vineyard. Plant Disease (in press).

Walker M, Chisholm J, Wei T, Ghoshal B, Saeed H, Rott M, Sanfaçon H. 2015. Complete genome sequence of three tomato ringspot virus isolates: evidence for reassortment and recombination. Arch Virol. 160(2):543-7.

Wallingford, A.K., Fuchs, M.F., Hessler, S., Martinson, T.M. and Loeb, G.M. 2015. Slowing the spread of grapevine leafroll-associated viruses in commercial vineyards with insecticide control of the vector, Pseudococcus maritimus (Erhorn) (Hemiptera: Pseudococcidae). Journal of Insect Science, in press.

Ward, N., Polashock, J., Thekke-Veetil, T., Martin, R.R. and Beale, J. 2015. First report of blueberry mosaic disease caused by Blueberry mosaic associated virus in Kentucky. Plant Dis. 99:421

Zhang S, Ravelonandrob M, Russell P, McOwen N, Briard P, Bohannon S, Vrient A (2014) Rapid diagnostic detection of plum pox virus in Prunus plants by isothermal AmplifyRP® using reverse transcription-recombinase polymerase amplification. Journal of Virological Methods 207:114–120.

Zhang S, Ravelonandrob M, Chambers M, Briard P, Masson M , Amato M, Vrient A (2015) Rapid diagnostic detection of plum pox virus by isothermal AmplifyRP® and by ImmunoStrip®. Acta Hort 1063:167-172.

Zhang S, Russell P, McOwen N, Bohannon S, Davenport B (2015) Development of a novel isothermal AmplifyRP method combining both real-time and endpoint assays in single tubes for rapid detection of plant pathogens. American Phytopathological Society Annual Meeting, August 1-5, 2015, California.

09/12/2016

Adiputra, J., Swamy, P., Donda, B., Bagewadi, B., Natra, N. and Naidu, R.A. 2016. The prevalence of grapevine leafroll and red blotch diseases in Washington vineyards. 2016 American Phytopathological Society Annual Meeting, June 30-August 3, 2016, Tampa, FL.

Adiputra, J., Swamy, P., Donda, B.P., Bagewadi, B., Natra, N., and Naidu, R.A. 2016. The Relative Distribution of Leafroll and Red Blotch Diseases in Washington Vineyards. Washington Association of Wine Grape Growers 2016 Annual Meeting, Convention and Trade Show, February 9-11, 2016, Kennewick, WA. 

Alabi, O.J., Casassa, L.F., Gutha, L.R., Larsen, R.C., Henick-Kling, T., Harbertson, J.F., and Naidu, R.A. 2016. Impacts of grapevine leafroll disease on fruit yield and grape and wine chemistry in a wine grape (Vitis vinifera L.) cultivar. PLoS ONE 11: e0149666. 

Alabi, O. J., Al Rwahnih, M., Gregg, L., Jifon, J. L. Crosby, K. M., Mirkov, T. E. 2015. First report of Pepper vein yellows virus infecting pepper (Capsicum spp.) in the United States. Plant Dis. 99(11):1656. 

Alabi, O. J., Al Rwahnih, M., Brown, J. K., Idris, A., Gregg, L., Kmieciak, E., Sétamou, M., Jifon, J. L. 2016. First report of papaya (Carica papaya L.) naturally-infected with the introduced Tomato yellow leaf curl virus-Israel. Plant Dis. 100(9):1959. 

Alabi, O. J., Al Rwahnih, M., Isakeit, T., Gregg, L., Jifon, J. L. 2016. First Report of Rottboellia yellow mottle virus Infecting Sorghum Sudangrass Hybrid (Sorghum bicolor× Sorghum bicolor var. sudanense) in North America. Plant Dis. 100(6):1255. 

Alderman, S.C., Martin, R.C., Gilmore, B.S., Martin, R.R., Hoffman, G.D., Sullivan, C.S. and Anderson, N.P. 2016. First Report of Cocksfoot mottle virus Infecting Dactylis glomerata in Oregon and the United States. Plant Dis. 100:1030. 

Al Rwahnih, M., Alabi, O.J., Westrick^, N.M., Golino, D., Rowhani, A. Description of a novel monopartite geminivirus and its defective subviral sequence in grapevine (Vitis vinifera L.). Phytopathology 00:000-000 (Accepted). 

Al Rwahnih, M., Golino, D., Rowhani, A. 2016. First Report of Grapevine Pinot gris virus Infecting Grapevine in the United States. Plant Dis. 100(5):1030. 

Al Rwahnih, M., Alabi, O.J., Westrick, N.M., Golino, D., Rowhani, A. 2016. Near-Complete Genome Sequence of Grapevine Fabavirus, a Novel Putative Member of the Genus Fabavirus. Genome Announc 4(4):e00703-16. doi:10.1128/genomeA.00703-16. 

Bagewadi, B., Ocampo, C., Movva, A., Hottell, D., Garza, M., Natra, N. and Naidu, R.A. 2016. Improving the Sanitary Status of Certified Mother Blocks in Washington State. Washington Association of Wine Grape Growers 2016 Annual Meeting, Convention and Trade Show, February 9-11, 2016, Kennewick, WA. 

Barba, M. and James, D. 2016. Certification and quarantine for viroids and viroid diseases. Chapter XX. In Viroids and Plant Viral Satellites. (Eds. Hadidi A., Flores, R., Randles, J., and Palukaitis, P.) Elsevier Publishing. pp. 000 000 (in press). 

Dey, K. Borth, W.B., Melzer M.J., Wang, M.L., Hu, J.S. 2015 Analysis of Pineapple mealybug wilt associated virus -1 and -2 for potential RNA silencing suppressors and pathogenicity factors. Viruses 7:969-995. 

Dey, K. Borth, W.B., Melzer M.J., Hu, J.S. 2015 Application of circular polymerase extension cloning to generate infectious clones of a plant virus. Journal of Applied Biotechnology 3:34-44. 

Diaz-Lara, A. and Martin, R.R. 2016. Blueberry fruit drop associated virus: A new member of the family Caulimoviridae isolated from blueberry exhibiting fruit drop symptoms.  Plant Disease Accepted June 27. 

Diaz-Lara, A., Gent, D.H. and Martin, R.R. 2015. Identification of extrachromosomal circular DNA in hop via rolling circle amplification. Cytogenetic and Genome Research 148:237-240. 

Di Bello, P.L., Laney, A.G., Druciarek, T., Ho, T., Gergerich, R.C., Keller, K.E., Martin, R.R. and Tzanetakis, I.E. A novel Emaravirus is associated with redbud yellow ringspot disease. Virus Res. 222:41-47. 

Eves-van den Akker et al. 2016. The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. Genome Biology. 17:124-147. 

Finn, C.E., Strik, B.C., Mackey, T., Hummer, K.E. and Martin, R.R. 2015. ‘Perpetua’ Ornamental Reflowering Blueberry. HortScience 50:1828-1829. 

Finn, C.E., Strik, B., Yorgey, B., Mackey, T., Hancock, J., Lee, J. and Martin, R.R. 2016 'Baby Blues' Highbush Blueberry. HortScience 51:761-765. 

Gergerich, R.C., et al. 2015. Safeguarding Fruit Crops in the Age of Agricultural Globalization. Plant Disease 99 (2): 176-187. 

Gergerich, R.C., Tzanetakis, I.E. and Martin, R.R. 2016. Towards a national certification scheme for Rubus in the United States. Acta Horticulturae 1133: 483-486.

Golino, D., Waclawa, P., Khuu, N., Shoulders, J., Aldamrat, R., & Sim, S. T. (2016, June). The Use of Micro-Shoots Tip Culture to Eliminate Virus for the Clean Plant Programs at Foundation Plant Services, University of California at Davis. In: IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL (Vol. 52, pp. S21-S21). 233 SPRING ST, NEW YORK, NY 10013 USA. SPRINGER. 

Hammond, R.W., Zhang, S. 2016. Development of a rapid diagnostic assay for the detection of Tomato chlorotic dwarf viroid based on isothermal reverse-transcription-recombinase polymerase amplification. Journal of Virological Methods (Accepted). 

Ho, T., Quito-Avila, D., Keller, K.E., Postman, J.D., Martin, R.R. and Tzanetakis, I.E. 2016. Evidence of sympatric speciation of elderberry carlaviruses. Virus Research 215: 72-75. 

Hottell, D., Garza, M., Ocampo, C., Bagewadi, B., Swamy, P. and Naidu, R.A. 2016. Gambling with Grafting: Do’s and Don’ts. Washington Association of Wine Grape Growers 2016 Annual Meeting, Convention and Trade Show, February 9-11, 2016, Kennewick, WA. 

James, D. and Phelan, J. 2016. Complete genome sequence of a strain of Actinidia virus X detected in Ribes nigrum cv. Baldwin showing unusual symptoms. Archives of Virology 161(2): 507-511. 

James, D. and Phelan, J. 2016. Detection and analysis of a filamentous virus isolated from black currant (Ribes nigrum cv. Baldwin) showing symptoms of leaf chlorosis and deformity. Plant Virus Disease Workshop Report, PSJ, Japan 00: 000-000 (in press). 

James, D., Sanderson, D., Varga, A., Sheveleva, A., and Chirkov, S. 2016. Genome sequence analysis of new isolates of the Winona strain of Plum pox virus (PPV W) and the first definitive evidence of intra-strain recombination events. Phytopathology 106:407-416.

James, D., Cieslinska, M., Pallas, V., Flores, R., Candresse, T., and Jelkmann, W.   2016. Viruses, Viroids, Phytoplasmas and Genetic Disorders of Cherry. Chapter 16. In: Cherries: Genetics, Ecophysiology, Production, Protection and Uses. (Eds. Garcia, J.Q., Iezzoni, A., Lang, G. and Pulawska, J.) Centre for Agriculture and Biosciences International (CABI) Press, Oxfordshire, UK. pp. 000 – 000 (in press).

Kesanakurti, P., Belton, M., Saeed, H., Rast, H., Boyes, I., and Rott, M. 2016. Screening for plant viruses by next generation sequencing using a modified double strand RNA extraction protocol with an internal amplification control. Journal of Virological Methods. 236: 35-40. 

Lanning, K.K., Moore, P.P. and Martin, R.R. 2016. First report of a resistance-breaking strain of Raspberry bushy dwarf virus in red raspberry (Rubus idaeus) in North America. Plant Dis. 100:868. 

Li, R., Fuchs, M.F., Perry, K.L., Mekuria, T., Zhang, S. 2016. Development of a rapid AmplifyRP Acceler8 test for Grapevine red blotch-associated virus in grapevines. American Phytopatholocal Society Annual Meeting. July 30-Agust 3, 2016, Tampa, Florida. 

Lightle, D., Dossett, M., Ebert, T., Finn, C.E., Martin, R.R, Lee, J.C. 2015. Effects of three novel resistant black raspberries on Amphorophora agathonica feeding behavior and performance. J. Arthropod-Plant Interactions 9:487-496. 

Martin, R.R., Constable, F. and Tzanetakis, I.E. 2016. Quarantine regulations and the impact of modern detection methods. Annu. Rev. Phytopathol.  54:189-205. 

Naidu, R.A., Maree, H.J., and Burger, J. 2015. Grapevine leafroll disease and associated viruses – A unique pathosystem. Annual Review of Phytopathology 53:613-634. 

Naidu, R.A. 2016. Managing viruses in Washington vineyards. WAVE 2016 Washington Advancements in Viticulture and Enology. WSU’s Ste. Michelle Wine Estates Wine Science Center, Richland, WA. July 14, 2016. 

Naidu, R.A. 2016. Rational Mealybug Control Programs vs. Irrational Exuberant Programs. Washington Association of Wine Grape Growers 2016 Annual Meeting, Convention and Trade Show, February 9-11, 2016, Kennewick, WA. 

Naidu, R.A., Natra, N., Akinbade, S., Bagewadi, B., Swamy, P., Adiputra, J., Hottell, D., Garza, M., Ocampo, C. and Schultz, A. 2016. Tackling emerging soil-borne virus diseases in Washington vineyards. Washington Association of Wine Grape Growers 2016 Annual Meeting, Convention and Trade Show, February 9-11, 2016, Kennewick, WA. 

Ornamental and fruit tree virus certification program. 2015. Oregon Department of Agriculture, Salem, OR. 2pp. 

Phelan, J., and James, D. 2016. Complete genome sequences of a putative new alphapartitivirus detected in Rosa spp. Archives of Virology XX: 000-000. (in press) 

Poojari, S., Lowery, T., Rott, M., Schmidt, A., DeLury, N., Boulé, J., and Urbez-Torres, J. R. 2016. First report and prevalence of Grapevine fleck virus in grapevines (Vitis vinifera) in Canada. Plant Disease. 100: 1028. 

Poojari, S., Lowery, T., Rott, M., Schmidt, A., and Urbez-Torres, J. R. 2016. First report of Grapevine Pinot gris virus in British Columbia, Canada.  Plant Disease. 100: 1513. 

Poojari, S., Alabi, O.J., Okubar, P.A. and Naidu, R.A. 2016. SYBR^® Green-based real-time quantitative reverse-transcription PCR for detection and discrimination of grapevine viruses. Journal of Virological Methods 235: 112–118. 

Quito-Avila, D.F., Martin, R.R., Alvarez, R.A., Insuasti, M. and Ochoa, J. 2016. First report of Potato virus Y, Potato virus V and Peru tomato mosaic virus in tamarillo orchards of Ecuador. Plant Dis. 100:868. 

Shahid, M.S., Tzanetakis, I.E. Aboughanem-Sabanadzovic, N. and Sabanadzovic, S. 2016. An integrating badnavirus infects blackberry. Acta Horticulturae 1133: 507-510.

Sharma-Poudyal, D., Osterbauer, N. K., Putnam, M. L., and Scott, S. W. 2016. First report of Lilac ring mottle virus infecting lilac in the United States. Plant Health Prog. 17:158-159.

Sharma-Poudyal, D., Lane, S., Grant, J., Osterbauer, N. 2015. Latent virus survey in pome and stone fruit nurseries in Oregon. Phytopathology 551-P. 

Swamy, P. and Naidu, R.A. 2016. Impacts of grapevine leafroll and redblotch diseases in Washington vineyards. 67^th American Society for Enology and Viticulture (ASEV) National Conference, June 27-30, 2016, Monterey, CA. 

Swamy, P. and Naidu, R.A. 2016. Impacts of grapevine leafroll and redblotch diseases in commercial vineyards. Washington Association of Wine Grape Growers 2016 Annual Meeting, Convention and Trade Show, February 9-11, 2016, Kennewick, WA. 

Thekke-Veetil, T., Polashock, J., Plesko, I.M., Keller, K.E., Martin, R.R., Ho, T. and Tzanetakis, I.E. 2016. Blueberry mosaic associated virus - a putative new member of the Ophioviridae. Acta Horticulturae 1117: 103-110.

Thekke-Veetil, T., Ho, T., Moyer, C., Whitaker V.M. and Tzanetakis, I.E. 2016. Detection of Strawberry necrotic shock virus using conventional and TaqMan^® quantitative RT-PCR. Journal of Virological Methods 235:176-181.

Thekke-Veetil, T. and Tzanetakis, I.E. 2016. First report of strawberry polerovirus-1 in strawberry in the United States. Plant Disease 100: 867. 

Vargas-Ascencio, J., Al Rwahnih, M., Rowhani, A., Celebi-Toprak, F., Thompson, J. R., Fuchs., M., Perry, K. L. 2016. Limited Genetic Variability Among American Isolates of Grapevine virus E from Vitis spp. Plant Dis. 100:159-163. 

Walker, L., Bagewadi, B., Schultz, A., and Naidu, R.A. 2015. First report of Tobacco ringspot virus associated with fanleaf disease in a Washington State vineyard. Plant Disease 99:1286. 

Welliver, R., et al. 2014. Expelling a Plant Pest Invader: The Pennsylvania Plum Pox Eradication Program, A Case Study in Regulatory Cooperation. Posted online September 2014. http://www.agriculture.pa.gov/Protect/PlantIndustry/PlumPox/Documents/PA%20PPV%20Eradication%209-2014.pdf 

Xiao H. Shabanian, M., McFadden-Smith, W., and Meng, B. 2016.  First report of Grapevine Pinot gris virus in commercial grapes in Canada.  Plant Disease.  100: 1030. 

Xu, Y., Wang, S., Li, Y., Tao, H., Huang, Y., Wu, B., Dong, Y., Hu, J., Liu, Y. 2016. Complete genome sequence of a distinct Calla lily chlorotic spot virus isolated from Mainland China. Arch. Virol. 161:219-222. 

Zhang, J., Borth, W.B., Sether, D., Wang, I., Lin, B, Melzer, M.J., Shen, H., Pu, X, Nelson, S., Hu, J.S. 2016. Deep Sequencing of Banana Bract Mosaic Virus from Flowering Ginger (Alpinia purpurata) and Development of an Immunocapture RT-LAMP Detection Assay. Arch. Virol 161 (7): 1783-1795. 

Zhang S, Ravelonandro M, Chambers M, Briard P, Masson M, Amato M, Vrient A (2015). Rapid diagnostic detection of Plum pox virus by isothermal AmplifyRP^® and by Immunostrip^®. Acta Hort. (ISHS) 1063:167-172. 

Zhang S, Russell P, McOwen N, Davenport B, Li R (2016). Development of a novel isothermal AmplifyRP^® assay for rapid detection of plum pox virus - a real-time and endpoint assay in a single PCR tube. The 3rd International Symposium on Plum Pox Virus, May 9-13, 2016, Antalya,Turkey.